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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64854_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_protein_pangolin,_isoforms_A/H/I/S_isoform_X3_[Amyelois_transitella]
Ontology
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005875 C microtubule associated complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007500 P mesodermal cell fate determination
GO:0007507 P heart development
GO:0008013 F beta-catenin binding
GO:0009880 P embryonic pattern specification
GO:0010628 P positive regulation of gene expression
GO:0016055 P Wnt signaling pathway
GO:0019900 F kinase binding
GO:0030111 P regulation of Wnt signaling pathway
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045610 P regulation of hemocyte differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060070 P canonical Wnt signaling pathway
GO:0070491 F DNA-binding transcription factor binding
GO:0072091 P regulation of stem cell proliferation
Transcript
Level		FPKM:2.97 TPM:5.18
ORF EntryO_BomoEE11205_5prime_partial:A_BomoEE_comp64854_c0_seq1
Sequence
(Nucleotide)
GATTCTGCGAAGCACTGCTCTTTAGGGCTAGTGTTCAATCATCATCATGTACAATCATCA
ATCAAGGTTTCCCCGAGAATTTCATTTCTCGAGAATAAAACAACAAATCTCATACAATTT
TTAAGTTGTTTATTAAAATAATATTCGTTCAACTGAACACAAGAAATGGGATCAGACCTA
GTAAGATTGAGTTTTTATTATTATCGTCTCTTTTTTTTTCTAATTTGAAAACATAATTTT
ATTTCTTCTTAATTTTCTTCTTCTACTAAACATAAATCGTAACTTGCTCGTATGAGCCTT
ACTGACCCTTCTTAACAATAAAAAACAACTTATAAAATCTATCAACATATTAATTACGAT
CAGAATTGAGAGGTATCCCGGATTAACCTGTTCTTTCTTTCAATTTGGCACAAACTGACA
ACTTCCAAACAATTTGTTCTAGATGGTTTTAAAAAAAAAAGAAAACACTTTTAATGTCAA
TAAAAAAATGTCCATATCCGCTGACAAACATAAAATCTTTCTCTTTTATTTAAGCAATAA
TTATTTAAAAAACATATCTAATTACGATATTGACGTCATATGTTTATATTTAATATGTAA
CATTAACTAACATGAAATTCCATTGTGTTTTCGGGACATGCAAATATATATTCTTTTTCA
TGTAAAAGTCAAATCGCATCGAATCAAGCACGTGGTAACTGATAATGATACGCAGTGTTG
TTTCCGATGTATCGTCAGTTAAAAATTTCCGTAATAAAATCCAAATCAAAACGCACAATT
ATTATTATTATTTTTCATTTAAAATCTGGCTCGATATTGCATTTAACAACGTTTAAAAAT
CTTAATAATAACAATAAAAAGTAATTAACAAAAAAAATTATTTGTTGAATAAAACAAAAC
CGTCCGTGAACATTCCGAGGGTGTTATTTTTCATATAATAATTAATATAAATGCAATATT
TTTTTTATACCAAAAAAAAAAACGTCCCTAAATATTCAATTAGTGAATTACAAATTTATT
TACAAATACAACATCTAAATGGGGCTTGCGAATAAAACCGTGTTCATATCTCCCGAGTCA
TTATTTCCAACTAATATTTTCATTTTGAAAATTTCTTTTTATATCGTAATAAATGTATAC
ATATGTAATTAGCATAATACACTTAAACTAGTATGACACAATTAGATTATACCTATATAT
ATTATACATTTATATCATATATGTACTTACACATATACAGTTTGAAAGTGTACCGAAAGA
CGTTTAGGAAAAATGTCGAATTAGCGCCATCTAGCAGTCATAACTTAAACTAAATGGTGT
CACATAGATGGCGCTTTAAAACAAAAAGAACGTTCAAGTAAAATGAAACTATAAAATAAC
GGGCGTTCGGTACACAATCAATTGAATAAAATTCACTCATACAACGTTTCTAATCTAACC
TATGACAGTCTACATGTTCCGCACAACGGAAAAACAATTTTCCCTTCGCTCCGCCTTAAC
ATTACTTTACACGCTTACCGCGAAAGGAAAATATTTATAAACTAAACCGAAACTAACACT
AAATGGAACCTTAGTCTGGTGCAGGCCGACAGATAAACGAAGAATCAGAGGCCTCAATAG
TTAAATAAAATTACGCGTCATGCATTTTATGTTACTGAAGCTTATAAAGGCTTACTCATG
GGTAGTGATGGCCGTGTCAAACTGAACATCGACAATGACATCGACAATCGGATGTATTGT
TTGCAAACGATCGGTACATCGCTGCCTTTTTCCCGCAACAATCAAACCATCACTACTCGT
GAGTTTAAACTTAAAATAAAATGTTAGATTTAATCTTCACATAGAATTAAAATGATGAGA
GCTAATAAATCTTTGTCATTTGGTCAAAGTATCAAAAATATTTATTTCAAACGATTCAAG
TCAAGTTACAATTCATTTTTGAGGCCTTATAAACAATTTTAGACAGCTTAGATCGTCATT
ATAATATTCATTGCGGTTATAAGATCGGTTGAAAATCGTTTTTAAGAATTAGTCTTGATC
CATGCCATACTTTTACTAACCAAATATTTGTTTATTTTTGTAGTATATTCATGTACAATG
CTTAAATAGTTTCTTTCCAGAATCAGTAAAAGGCACAGTAAGAAAAGTCAAGTTCAACGC
CACCTACATTTCATCTTTAGAACTAAAACGTCAGTTGTTATCTTGATGAAGAATTATTTA
CGTTAATAGTGTTTAGTTAACGGACAAGATGCTAGATGGCGTTGTTATCGATTAAATTTC
CTGTATAGCGTATTTGGAAACTAAAAATATGGATAGAGAATAATAATACATTGTAAATGA
CTCGATTTGGGCTCGCGATTTTGAGATCATATGACTATTTATCATCGTAAAAGCAAAGTT
ACGGCCGCGCTGCGAACTCGTGTGTCGTGGTGAGTTATAGAGCAAATGAAAACAATAAAT
TCCTTTAGCGAAAACGTTTCGGGCGCGGTCGAAACAATAGACTTTCGCGTTAAATTCACA
AATGTGTTTATAAAAAAAAACAAAACATATTAACAGAAAACGTAACCATCGCGTTTTTAG
AGTAATCCTGATTTCGAGGAACATCGCACATTCGGTCATAGGTAGATAAAATTTACATTA
GGCCTCACAATCGGCGGTGTCACGATAGACAAAAAAAATATTTTTATAGACCCGGATATA
AACACGATTCCGGGTAAATTCGCGCACGAAATGTCGATGTTCCTCGACGTCAGAGATCGC
AAACGTTAATTTAGCACCCGGTTCAAATAAACCCGAATCAGAGAGGGGGGTTGGGGGGGG
AGCGACGACATCCGCTACGTCATCGAGCGATCAACAACATCAATAGTTCAATATCACAAC
CAACACGCTCGCCGGACTACGAGACGGAGATGACCTCGTGCGTGGGACGCGGCTGGGCGG
CGCGGGGCCAGCTCTGTGACGTCAGCTGGCCGACGGACAGGGGGTTGTTGACGTCACGCG
GGTTCGTACCTACCGGGTGACGGGCCGGCGGCTCGGAGGCGGGCGACGCGAGCGAGGACA
GCGCGCTCAGCCCGCCCGGACTGGACGCCGAGTTGAGCGCGGTGTCCGCTTCGTCGCTGG
ACGCGTCCGACATCTCCTCGAGCTTGACGTCCTCCTCAGAGCAGGGGGACTGGGTGGGGA
GGTTGTCGCCGCCCGACGCGGCCGCCGCCAGTGCTTCCATGTACCGCATGCACTTTTTCT
TCCGCCTGCAAGGTTTGCACCACTGATTCTGCTGATCGAGGCCGAACCTCGCTCTGCATT
TCTTCAAATTATTCCCTCCATCGGTTGTCTCCTGTTTTCGTTTCCTCTTCTTGCCCCTTT
GCGTATTTGCCCTAGACGACCAATCGGGATAGAGTTGCATGTGTAGCTGGCGTTCGCGGC
GCGCCAGCTCGTAATACTTGGCTTGTTCCTCGCGGCCGAGCGCATGCCACCGTCGTCCTA
ATATCTGGTTGATGGCCGCCGACTCCTTTAGGGTACATTCGGCGACAACCTTGGCCCTCA
TCTCCTTCATGTAGAGCATGAAAGCGTTTAGTGGTTTCTTTATGTGAGGTTTCTTTGTTT
GTTCCTTGTTAGAGTTCGCCGAAGACTCCGACGGTTTGTCATTCGGGGTGCCGCCATTAC
CTTTCTCTAATGACCTAGCATACCGCGAATGGTGGGAATCGAGGTCCGCCTTCGAGGGGG
GAGGGGGCACCAGCGCAGGTCCTAGACCCAAACCGAGACCCCCGCCCAGCGTCGGAGAAA
ACCGGTATAATTCACTTGATAGACTAGAACTAGAAATAGGCAATGACGTGGGGTATGGAC
TCCTGAAGCCACTCGCCGCCGACGATATAGGATACATGCTCGGAGTATGCCTGTCGAAAT
GATGACCGTATGTCAACCAGGAAGCCGCAACTTGCGACATCTCCGGACTGAGCATAGGGT
AAGGGTACGTACCCCCCGGAAAGGGGTACATGGGTGTTCGCGCTAGCCCAGCCGCTAGTT
TAGAATCTAGCTGGTAGGGTGGGGGGATGCCCATATGCGCGGGAGGGGGCTGCCCCAGAT
CTCCACCAGGGCAGAACAGCGATAGGCTACCGCCTGCTGGCAGCCCCATCTTTCCTGTCA
TAGCAACAGGAAGAGGATGGGCGCCACCATTAGGGTATGGATAAGGAGCCACCAGGTAAC
CCATGTTGAAGCCAGCCGCCGGATGCGGTTCGAATTTACCAAAAACTGGACTAAGATCCG
ACTTCACAGATAGTTTGCCGGGGTATGGCTCTCCGGATTTCTCCTCGCTTTCGGTCCAAT
CGATTAGACTCGACTTCTCCTCTAATAGGTTCTCGGAACTTCTCTTCTCGTCCTCTCCGT
CGCCCTCGTCCTTGAAGACCTTGATCTCATCCGTTGAGCCCAGGTCGTCGCCGCCCGAGC
TCGCAGCCGAACTCGAGTGAGCATGCGGCATCTTCAACTCACCCGAGTTCTACTATATCC
CATCCTCTAATCAAACCCCCACTATCTGTCATCCATGTCACTTTAAAACGCCACAGCAAC
TAACATCCTATCCTGATCCAAGTCTCTTCGCTAAACTAATTTAGGCGTCCGTCACTATAC
TAACATGAGATCACAGATTGAAGACTTAAATGCCTAATGAGGTGTTCCGTTAGTTTTCGT
TCTTGGTATCTAAACACTGCGAGCATGGCGCACTCCACGCGCCTAAAACTCCAATATTTG
AAATATTTCACTATCCGTTTGACACAACACGCACGTTACATTCTCGTTATCACACACTGT
CGTCGCTTATTGCACTCGCGATGCACGTAATGTGGTACACTGGTCATTATTTTGTTTATC
GGCGTCAGTTTGACGGAGAAGCGCGAACGGGCCGCGACCGGCCGGGAGTCGCGGGTACAC
TGCACGCGAGAGCGGCGAGGCGCCCGACACGCACACAACTCGGCTCGTCTCACTCGCACA
GATACAGCTCGGTGTGCACCGACTCAAGCTTACAAAAAACCAACGATCGGTATGCAGACG
TTCGGTTTGAGCAGGTCCTCGGCTTGACGCTGTTTTCGTCTGCGGTCCAGGGTTCCCGGA
ATCCGAA
(5107 bp)

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