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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64830_c0_seq3
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_translational_activator_GCN1_[Bombyx_mori]
Ontology
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005844 C polysome
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0008135 F translation factor activity, RNA binding
GO:0016020 C membrane
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0033554 P cellular response to stress
GO:0033674 P positive regulation of kinase activity
GO:0034198 P cellular response to amino acid starvation
GO:0036003 P positive regulation of transcription from RNA polymerase II promoter in response to stress
GO:0043022 F ribosome binding
GO:0044822 F RNA binding
GO:0045859 P regulation of protein kinase activity
GO:1990253 P cellular response to leucine starvation
Transcript
Level		FPKM:10.38 TPM:18.11
ORF EntryO_BomoEE11181_complete:A_BomoEE_comp64830_c0_seq3
Sequence
(Nucleotide)
GACGACGCCGCCGCGCTGCTGGCCGGCCTGCGCAGCGAGAGCGAGGTGGTCCGCGACACG
GTGCTGCAGGCGCTGCTGAGCCTGGCGGAGCGGCTGCCGCCCCTGCTGCAAGACGAAGAC
TACGCCTACTCCGTCGTCAAGCGGATCCTGATCGCCACCTTCGACGTAGTTGAAGACAAC
AAGAAGCTAGCCGTGGAGCTGTGGGAGCGCGTGCCCGGCTGCGAGCCCGTGTCCCGCGGC
GCGCTGATGGCGGACCTGGTGCTGGACGAGCTGCAGACCGCCTGTCTCCCGCTCCAGCGA
GCAGCAGCCCTCGCCCTGGCGCACCTCGTCCTCCGCGGAGACGCTCCGTGCGACGTCCTG
CTGCAGCGTCTACAGGACCTGTACGCTGAAAAGCTGCCCCTGATCCCGGCCAAGCAAGAC
CAGTTCGGTCACGAGGTGGAGCCGGCGCTGGACATGTGGGAGGGGCGGCGCGGCGTGGCG
CTGGGGCTGGGCGCGCTGGCCCCGCGGCTGCAGGTGGGCGCGGTGCCGGCCGTCATGCGC
TTCTTCGTGGAGTGGGGCCTGGCCGACCGCCGCGACGACGTGCGCGCCGAGATGCTCGCC
GCCGCCATGGCCATCGTCGAGCTGCACGGGAAGGATACGATCAGCAGCCAGCTGCCGGTG
TTCGAGAGGTTCCTGGACTCCGCGCCCAAGTCTGGCAGCTACGACGCGGTGCGGGAGGCC
GTGGTGCTGCTGGTGGGGTCCCTGGCGCGCCACCTGGAGCCCGACGACGTGCGCCTGCGC
CCCATCGCGCTGCGCCTCGTCGCCGCCCTGTCCACGCCGGCTCAGCAGGTCCAGGAGGCG
GTGGGCAACTGTCTGCCGCACCTGGTGACGTCACCGGCGCTGGAGAGCGAGATCCCGGGC
ATCGTCAACAAGCTGATGAAACAACTACTCACCGCCGAGAAATTCGGAGATCGAAGGGGC
GCCGCGTACGGCATAGCCGGCGTCGTCAAGGGGCTCGGCATCCTGTCCCTGAAGCAGCTG
GACATCATGGGGAAACTCACAGAAGCCATACAGGAAAAGAAGAACTACAAGTATCGCGAA
GGCGCGCTGTTCGGGTTCGAGCTGCTGTGCCGCGTGCTGGGCCGCCTGTTCGAGCCGTAC
ATCGTGCACGTGCTGCCGCACCTGCTGCTGTGTCTGGGCGACGGCTCGCAGTACGTGCGC
ACCGCCGCCGACGACACCGCGCGCCTCATCATGAGCCGCCTCAGCGCGCACGGCGTCAAG
CTGGTGCTGCCCGCCCTGCTCAACGCCGTCAACGACGACAACTGGAGGACTAAAGCGGGG
TCCATCGAGCTGCTGGGCGCCATGGCGTACTGCGCGCCCAAGCAGCTGTCGTCGTGCCTG
CCGTCCATCGTGCCGCGCCTCATCGAGGTGCTGAGCGACTCGCATCTGCGCGTGCAGCTG
TCCGCCGCCGCCGCGCTCAAGGTCATCGGCTCCGTCATCAGGAACCCCGAGATCCAAGCC
ATCGTGCCGGTGCTGCTGCAAGCCCTGCAGGACCCGTCCAACAAGACGTCGGCGTGTCTG
CAGACGCTGCTGGACACCAAGTTCGTCCACTTCATCGACGCCCCGTCGCTGGCCCTCATC
ATGCCGGTGGTGCAGCGAGCCTTCCTGGACCGGAGCACCGAGACCCGCAAGATGGCGGCG
CAGATCATAGGCAACATGTACTCGCTGACCGACCAGAAGGACCTCACACCCTATCTCCCG
AACATCATCCCGGGACTGAAAAGCTCTCTACTGGATCCCGTGCCGGAGGTCCGCAGCGTC
TCGGCGCGAGCCCTCGGCGCTATGGTAAAGGGTATGGGAGAGAGCAGCTTCGAAGAGTTG
CTCCCGTGGCTGATGCACACGCTCACCTCGGAGACCAGCTCCGTGGACCGCTCCGGTGCT
GCCCAGGGACTCTCCGAAGTCGTCGCTGGACTTGGAGTGCAAAAATTGCACAAGATTATG
CCAGACATCATCGCCACGGCGGAGCGCACGGACATCGCGCCGCACGTCAAGGACGGCTAC
ATCATGATGTTCATCTACATGCCCGGCGCCTTCACCGACGAGTTCACCCCCTACATCGGC
CAGATCATCAACCCCATCCTCAAGGCGCTGGCGGACGAGAACGAGTACGTGCGCGAGACG
GCGCTGCGGGCCGGCCAGCGCATCGTCAACCTGTACGCGGAGTCCGCCATCGCGCTGCTG
CTGCCAGAGCTCGAGAAGGGCCTGTTCGACGACAACTGGAGGATCCGCTACAGCTCCGTG
CAGCTGCTGGGCGACCTGCTGTACCGCATCTCCGGGGTCACCGGCAAGATGAGCACCGAG
ACCGCCTCGGAGGACGACAACTTCGGCACGGAGCAGTCGCACAAGGCCATCATCACCGCG
CTGGGCCCCGAGCGCAGGAACCGCGTGCTGGCCGGCCTCTACATGGGCCGCAGCGACGTC
GCGCTCATGGTGCGCCAGGCCGCGCTGCACGTCTGGAAGGTGGTCGTCACCAACACTCCC
AAGACGTTACGCGAGATCCTGCCGACCCTCTTCGGGTTGCTGCTCGGATGCCTCGCCTCC
ACCAGCTACGACAAGCGACAGGTTGCCGCCAGGACCCTGGGAGATCTCGTCAGGAAGCTG
GGCGAGCGCGTGCTGCCGGAGATAGTGCCCATCCTGGAGCGCGGGCTGCGGTCTCCGCGC
GCCGACCAGCGCCAGGGCGTCTGCATCGGGCTCGGGGAGATCCTCGCCTCCACCTCGCGG
GACGCCGTGCTCAGCTTCGCCGACGGATTGGTGCCCACGGTCCGCACCGCGCTGTGCGAC
CCGCTGCCGGAGGTGCGGCTGGCTGCGGCGCGCACGTTCGACAGTCTGCACGCCACCATC
GGCAACAAGGCGCTGGACGACATCCTGCCCTACATGCTCGAGGGCCTGAAGGACCCCGAC
CCCGCCGTCGCGGACGCCACGCTCGACGGACTCAAACAGATAATGTCGATAAAGTCGCGC
GCGGTGCTGCCCTACCTGATCCCGGTGCTGACGGGCGGCGGCGGCGGCGGCGTGGACACG
CGCGCGCTGTCGGCACCGGGATCAGGTAGGGCAGC
(3095 bp)

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