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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64810_c1_seq2
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		putative_lectin_C-type_domain_containing_protein_[Danaus_plexippus]
Ontology
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0004528 F phosphodiesterase I activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008409 F 5'-3' exonuclease activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0017108 F 5'-flap endonuclease activity
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0036297 P interstrand cross-link repair
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0070336 F flap-structured DNA binding
Transcript
Level		FPKM:9.61 TPM:16.77
ORF EntryO_BomoEE11149_complete:A_BomoEE_comp64810_c1_seq2
Sequence
(Nucleotide)
CGAGAAAATAAAGAAATGGAAATATTATAGTACTATACCGGGCAAGCTATAACTTAATTA
TTATATGTATTACATATAAAACCTGTGAATAAAATTGAAATTGTGGAAAAAATAATGGAA
ACAGTTGGAAATTAATACATATGATGACAAATGTACTTACATATTCTTTTGTAGAGCTCA
TAGGAGCACCATGAGCCATCAAACAAGTATTGATAAATATTTTAAATCGAAATTGCCCTC
TAAAAGTTTCAGTAGCATGAACCAGAATTCCGCAGGAAGTAAAAAAAGATTTAGTTTGAG
TCTCGCAAACGGACCCCCCGTAAAGACACTAAAAAATGAATATACTAATTCCATAGTAAA
CATATGTCCAAAAGCGGAGACCTCTTCAAGATTCCCAAGCCCTGAAAGGGAAAATTGCAA
AACTGAAACTTTAATTGATTCCATTAAATCTGAAATAAGCCCGACAACCCCACGGAAATC
GCCAAAATCATTCGGTTCTCAAGGATCTGGATCAAAAGATAAATTTTACTCACCAAACAA
AAAGCGAGCTGTTTTAAAAAAAAGAAGTCCAGTCAAAAAGAATTTAGCTCGAGATTCATT
TGGATGCTTAGAAAACGATAACTCAATTGATCATGTTTTCAAAGCTGCAAGTGATGGAAT
GGATGATAAAACTATATTTCTATTGAACATCATCTATAATTTTTTGAATAATGAGAATTT
GAAGAACCTACTAGATGAATGTTCTCAGACTCTTTTAAGTAGATGTCTTCATGTGAAAAA
GCCTGGTGTCAGAGTTATATGTAGATTGTATTGGAGGCAGGCCACCATTTACCGCTGGGA
TGATCTTGAAAATATCAGCAATGATAGGTCTAATAAAATTCAAAAACAAATAGTACAAGA
AATGATCAGTGATCTAGTGAAAAATGGTTTCCTTGAAAATGTTAATTCTGATGATACATG
CAAATTAAATTTTCATGAGATAACTTCTAAATTGAAAGCTGATGAATTGAAACAAATATG
CAAGGAATTAAATATAAAGGTTCAGTCCAAACAAAGTGCAATAAAATTATTAGAGAATTA
CAGCAACCAAAGTTCCATCAGCAAGTTCTTTATACAAGCGAAAGAAAACCCTACCAACAA
CAAGACCAGACTCTTGGAAATATTTAAAAAAAAATTAGGGTCGTGCTACAAGTTAACTGA
AAAAGCAAGAAGTACACTGTATGAGCTGTATCTATTGACATACTTAGGAATGGGCTACTC
AATTATAAGAGAGAAGAGGCTGGAACTTACATTACTGTATGAGAAGATTAATCGTGAGAC
ATTTCCAATTATCGAAAACAGGGATATTGATGATGCGAGTGTTGTTTTCAAAAATCGAAA
AGAGTTTGAGAAGTATCTAGACGCTCATTATATATACGAAAAGTATATAATCGAGACGGA
CGATAAAGTCAAATGTATTTTAGTAGAAACGGTGTATGAAATGTACAAGAAAATTGACAA
GGAAGACATGATTAGATACACTTCACTACCAGAGTGGTTGCGTCGATATACGCCGCCATA
TATATTTGTGAAAATATTAGGCGAAGGGATCCAGTCGCTGAAGCGTAATAAAAGTGACGT
GTCTTCGAACTTCGCCGTTGAAATACTCAGTGTGCTGATAGCGCAGGACTCGTTCAGGCA
ACACAAGAAAGCTGGCTGGTATACCGAAAAAGCTTTAATACTACAGAAATATCTTGGACG
GCACGATGAAGCGGCCCAGTTATTATTGGAAGGACTTCAGTCCAACAAACTTTCAGACGA
CGCCAAAGACGCGATGCGACCTCAAGCTGTCAAAATATCGAAGCAGAAAACAAATGTAGG
AAACAAACTAAGAATAATTCTCAACGAAATCGCCAATGAAAATATCAAATTGGAAAAGGA
TTTGAGCGCTGAGCATTTACACAAAAATCCTATGGATAACTGGTATAAAGGCAAATTGAA
GTACGAGGTTTGCATAGATGGGATAAGGCAAGCCATTGAGGTTGAAGATTACTGTATCTG
GCATTACATTAACAACGGAACGTACACCCACGGTGATCACTGGGAAGGCAGAATAATCAC
GACAATATTCTTTCTGCTGTTCTGGGATATCATATACTCGAAACCTGCTCACGCACCAGG
TATATTCCTCAGTCGCTATCAGAGGTATCCATTGGACTTGTACTGCGATAGTTTCTACAC
GAATAGAAAGAGTGAGATCGACGAGCGATTGAGTAGTCTAGCGGCGGGCAGCGCAGAGGA
TATGTTGGAGGCCATGAGACGCGTGTGGGACTCGAGGCCCGAGGGTGAACTATCTGGACT
AACGAGGAGCATAGAGTGGGACAGGATAGAGATGGTGGCGGGTTGCCTGGGGCCGCGGCG
GGTGGGGGCGCTGTGCGAGCGACTCGCCACGAACTACGGGCACGCGCACAGCGGCTTCCC
CGACCTCACGCTGTGGAACGCACACACGAAAACAATAACGTTCATGGAGGTGAAGTCTGA
CTCAGACCGTCCGTCCGTGAAGCAGCTGCAGTGGATGCACTATCTCCAGCAGCGCGGGCT
CCGCACGGCCTTCTGCTACGTCGGCGGAGACTCCGGGCGCCGCGCCAGGCTCGACCGCCC
CTGACGCTGCCTACTATACACGCCAATCACTGTGTCTGTCACACGCCCGTCATAATAATC
ACCTTATCGTCTCAACGAAACCGATCCTGATTTGAT
(2736 bp)

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