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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64693_c0_seq1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		X-ray_repair_cross-complementing_protein_5_[Operophtera_brumata]
Ontology
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016829 F lyase activity
GO:0032508 P DNA duplex unwinding
GO:0042162 F telomeric DNA binding
GO:0043564 C Ku70:Ku80 complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0051575 F 5'-deoxyribose-5-phosphate lyase activity
GO:0070419 C nonhomologous end joining complex
GO:0071480 P cellular response to gamma radiation
GO:0071481 P cellular response to X-ray
Transcript
Level		FPKM:16.41 TPM:28.63
ORF EntryO_BomoEE11028_complete:A_BomoEE_comp64693_c0_seq1
Sequence
(Nucleotide)
GCTCAAACCATCCGAGCCACAATAAAAAAATCTATGTTTTTTTTCCAACATTTACTGTCA
AGTGTCATTTACTAAATTATCATAAATTATAAACATTATACACTATTTGATTATAACCTA
CCGTATTAAATTGTTTGTAATTCAATTATTGATAGGTGCATAATGGATTCTGATATTGAA
GTAGAAGAGTGCGAAGAGTTTTCTTATAGAGGAAACGCTGGAACTATAATTCTTATCAAT
GTATACGATCCCCTATCGTGTAAATTCCCACAAATTGCGCATGTTGCAACGTGTCAGGCA
CTCAAACATTATCTACGTACATCTACTTCGCATAATGTAGGTGTTGTCTTATATGGTATT
GATGATCCAACTTCGAACATTAAAAACGTATTAGAAGTTATGCCATTGGCGCCACCTAAC
ATGGATGACTATAAAAAACTAAAAAACATCAACATTCTAGCTCTCAAACAAGCAAAAGAA
TTAAGATTGTCAGATGCGTTATGGTACTGCAATAAAATGTTTAATAGTTGTACAAAAACA
CTATCCTCTCAAACTATTATTCTATTGTCAAGACTTGATACACCACCTCTGTCTGAGGAT
GAAACACCAACATTTGATAGAATTGTTGAATTGAATAATTCTGAGATAATTCTCAAATTA
ATTAATTTGTCTGACTCTGAATATGAAATTCATCAATTTTATAAAGATTTGCTATTTGAG
GTAAATAAAAACTCATTGCCAAAATCAGTTTGGAAAATTGAAGATGTTACAAAGTTAATT
CTAAATGAATGTGACCGTCATTTAGCGACCGCTCAGCTTATTTTTGAAATTGGGAATAAT
GTATCAATTGGTATTTCTATCTATAAACTATTGAAAAGCAACATAGAACCAAAGAAAGTG
TATTTAAGTAATGAAACAAATGCTGTTGTAACTAGTGACACTAAAACGACTAAAGTTTTG
GTAAAACCTGATACTGATATGGATATTGATAGGGTTGAAGAACAAGAAATGCCTTTACTT
AAGTCTGAGCTGCTTCACTGTCAAGAATATGGCAATGAGATTATAGCATTCACTGATAAT
GAATTTAAAACTATAAATAACCCATTTGGTCCAGCGAAACTAAAACTGTTGGGATTCAAA
CCAGAAACTTTCCTCTGTAAAGAGAAATGGTTTTTGAAAAATTGTTCTTTCTTATTCCCT
AATGAAAAATCAATAGAAGGTTCTACAACTGCTCTCAAGGCAATGCACCAAGCATGTATT
GAAACAAAAACTGTAGCTATTTGTGTGATTTGTTCTAGAATAAATTCTAAACCTAACATA
GTGGCTCTTTCACCCTGTACTCGGCCCCTTGGTTTAGATATAGATATTGGATTTGATGTC
ATACCATTACCATTTTCAGAAAATGTAAGGGATCTCTCAAGTCTTTTTTCAGATGAAATA
GCAGATACGTCAGACACACAAAAAGATATGCTCAAAAATATTATTAATAATGTAAAGTTT
AATTACACTCCAAGCATGTTTGAAAATCCTAAGTTGCAATCATTGTATAGAGTTATTGAA
GCAAAAGCATTAAAACAAGATGACATAGAGCCTTTTGTTGATACCACAAAACCACTAAAT
AAAATATTTAATGAGATTGATGGGGAACAATTTTATGAACTATTTGGTCCATTCGGAGTA
ACCGCAGTCAAAAGAAATAGTGAAACAAAACCAGCTAATACCAAACTACAAAAGACTGCT
GATGTCAATATTGATGTATTAGATCAAAGAGTTAAAGACAGAAAAGTAAATATGTATACT
GTACCCCAACTTAAAGATATACTGAAACATAAGAAAGCAACAGAAGCTCTGACAGGTTTA
AATAAAAGTAATCTAGTTGATTTAGTTTACAAATATTGTAGTTAAAACATATTTTAAAGG
GGATGATTAAAACATATTTGAATTTAAGATGTTAAAAAATAAAATTGATATTTACTATAT
TCAGACTTTTATTG
(1994 bp)

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