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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64631_c0_seq2
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_1_precursor_[Bombyx_mori]
Ontology
GO:0004175 F endopeptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008201 F heparin binding
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0010573 P vascular endothelial growth factor production
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030199 P collagen fibril organization
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0032964 P collagen biosynthetic process
GO:0043206 P supramolecular fiber organization
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1900748 P positive regulation of vascular endothelial growth factor signaling pathway
Transcript
Level		FPKM:0.43 TPM:0.74
ORF EntryO_BomoEE10940_complete:A_BomoEE_comp64631_c0_seq2
Sequence
(Nucleotide)
TGCTCTTTTATTATGGTGAATTTGTAGTACATAATTATGGCACTTTGTTCCGTACTTCAT
GTTCGATATAAAATTACTTCTTAAAATCTACTTATAAATACGAAAAACAACAGACGTACA
AAATACCGGTTATGCTGACATGGAATCTTTTATTTTTAACTAAATAACAAGAGACCATTG
TTTAAGGCAACGTTTGAAAATACTCGAATAAGTTTTTTTTTATCAAAAATGAACAATAAA
ATCCAGTTGGTTAATTATTATTTGAAAAATTGTAGTAGTAATACACAGTTGTGGTTATCA
AAATAAACCATACTATTTTTTTAAGTAATCGTTTAGTTCCAAACGCTACCTTAAGAAGAG
GATAGAAATAACGCTTTGAAACTATGGGCCTCAGTATATTGACTATGACCTTTAAAAGAT
ATAAGAATACTATGACATCATGTTTGTGTACGAATAAATTTTGCATAATGTACAGTTTTA
GAGTTATGTTTATTATAATTTATTCAATAATGTGGACCTTAAGAAGATAGGTTGCATCGT
AAAATCTTTTAAAAACATTCTAGCATATTACGAAGTTTACGAACCTACATTATAACCGGT
TCGGTTTCTCGGTTCAGCGTAGTCCCAGAAGTTTGATAAAAACGCAGTTTCTACCATTAA
GTTGGACAGAAGCGACGCTTCTCAGCCGTACCGTCTGTGCTGACGGCGGTCTGCGTCCCT
GCAAGCGTTACAGCAATATTTCCTGAACGGCGGCACCTCGCAGTTCCGGTGCAGCTGTTC
CAGTGTGAAGAGCTCGCAGTAGTGCGCGTGGTCGCGTTCGGGGCACTGCACTGCGACTCT
CAATGCTGAGGGGCAGCGCCGGAGTCTGCAGCGCCGGCGTCGCTCGCGCGGCTTCGGTCC
GCATAGTAGCTCGTCTGACGCCGGACACGTGAGCGGACGCCGGGACACGCCGCGTCCGCA
CGACGCCGAGCAAGGAGTCCAGGGTTGCTCCCTCCAGTAAACAGGGCAGGGGATACGGTT
GCAGGGCTGGCGATGTGGCGGCTTTGACGACGAGCACATGACTGGTGACACGCTGTGTTT
GATAAACTCTCTCCTCGATAACATGCTTGCGTTTGATGGAACACAGAACAATTGTCTTTC
TTGAACACCGTTGCTACCGCATGTCGAACTGCATTCTTCCCAATCGTCAGAAGCCCACAC
AAATTCACAGCTGTGTGTATTGCATGATTCGTATCTAGGCGGTGGACATTTCTGATCTCG
ATGACACTGGGCTGTTATCAATCGCACACCGCCACCGCAGGACGCGGAACACGGACCGCG
CTCTATCGACCACCTGTATTCCAATGGTCTCGTGCGTCCAGTTGGAGTGCTGTAGTTTAC
TGACACGTCCACACTGACCGCATCTTCTAATGTAGGATTAACTGGTATTGCCATTATCAT
CAAATCAGTTTGCAGTCTAGATTCTGACGTTATATAAATGTCCGTGTCGGTTTGATTCCA
GCGCAGGAGAGTCCCAGCCGTGATCGCCTCGCCTTCATAACGAAAGCTCTCTTTCAAGTC
TAAAATGTTGCTGTCCATTTCCACGATCTGAAGATTCTGAGGCACGCTCGGATCGTATTT
CAAGTAGTTGTCCTGAAGGGAGCTGATGTCGAATTTTTTGGAGTGCTTAGAAAGTTCTAG
AATCGGCTTGTCCCGTTTCCGTTCGCGCAGTGCAATGTGGAGGGGAATCGGTGTGGCTAT
GTGTATGGACAGTTGACGTGCTTCGTGCGGCACCATCGTCATGCGAGTCCAGCCGTTACC
GAGTAATCTTGTGTATGTGTTAGTGTTGTTGTTGCAGTAGCCGTCTGGGCACCAGTTGCA
GGTTGTATCTGATGAATTGCATTGACCTTTCACGCACGTACCCTGGAAGCAAACGTCGAA
GGGTCGAAGGTAGCTGCAGGGCGTTCCGTCGGGTAGGGCTCCGAAATTGGTGGGCGACCC
TCCAGCGTAGTCCACACACGAAATTTCACAATGGTTGGACTCGTTGGCATGTAAATAAGG
TATGAGTCTGCTCTGTTGGCGATGGCAGAGGTCGGAGCGGATGTCTCTGGTTGCAGCGCA
CGAAGACCCCGCCCAGCAAGTCGCTACTTGAGATCCAGCACCCTCACATGCGCTCTCTGA
TACAAACCCTCTGTATTTGCATTTTCGTGTTCTTGTCCTGAGGCCGTAACCACAATCTGC
GTTGCATGCGCTCCACTCCTCCCAATCTCCCCATTCTGGAGTATGTTTGTTTTCAACCTT
AGTCTCTTTACTGTGGCCAGGCATCGGCTCGCAGACACGATCCACGCACCATTGGTTTTG
TCCACAGGGTGTTCCCTCGAGAGGCGGCGCTCGCTTTGACCGGCACACGTGAGGCATAGC
GCGGTGGGCACACCACAACCTTGAGCACGCAGACCGAACCTTTACGGATCGACACACTGA
GAAACCTTCTCCGAATTCAGTCCTGCACTGTTCATCCATTGTGAAGACATAATTTGAGAG
CTCCTTAGCACCACCTAGTTCCACACCCTCGTCAGTGCTACGCTCATGGAGGCACCACCA
CTTCTTTGATTTCGCATGAAATTGTTCCTTTGAACAACTTGACCAGGCAAAGTTGTGTAG
GGTAGCCAATACTGTCGGTGCCATTACAGAGCCTCGAAGCGCTTCAGACTGACAATTGCC
TTCTCCATCGTGGGTCAACCCTAATAAGTGAGCGAGTTCGTGTGCAATTACAAAAGCACT
GGTCAATCCTTCGTCGCGGTCGATGGCGGCTGACCGCGTTTTGGTGCAGACCCCACCTAC
GGGGGCGAACCCGGAAGGCCCTCCAAGCTGGGATCTCGTCAACCATATTGTGGCGTCCCA
TCCTGTGCTACCTTCAGGTAGCTTCATGAGATGTCTATAGTTCCACTTGTTAATAGCTTC
TAACGATTTTTTGATGTTGCCGTACTTCAAAATTATGTCCTTGTCCTCGTAGAGAAACAA
TTTGTTGATCACTAACGTGATGTTAGAGCCCAGTGATGGGTCATTGAAGATGGCACTGAC
AATATTCATTAAAGCTAAAATATAATGTTTGACACGTTCTCGGCCATGAAATTTCAACAT
GGTGTTGTCGGCAACGATGGCCAGTTCAAGCCAAAGACCCTTTACACCTGACGCAGGTCT
TCTGAACAAATGCATGTCATGGAAGTACTCTTTGTCGGAATGATCGCTGTGCCGCGGATG
TACGTGCGAGGTCGGTAACAGGTCATCATCTTCATCGAAGTCAAGATCAAGGTCGATGAC
CGTATCACCGGTGAGGTTGTACTCGGCCGAACGCTCGCTGTGCGTAACGTCTCGGCGTCG
TAACACGTGTTTCTCCTGCGTTCTGGTCGGCTGCAGCACGAACTCTTCACCGCCGACCTG
CAGCAGCCCGTACAGCTGTCCGTCACATTCGGTAACCGTCACAGCGGAGCCCTCTTCATG
AAGAACGCGTCCCGTAAAAAACTGACATTCCTTATAATAAGGCGAACGAATAGCTTTGTT
TTCTTTTAACTTGAGATCCCAACCGAGGAGTCGCAAGTGATGAGTTTCTTGCGCGTGTCT
GCGATGTCTCGGAGTGAGCAGCAAGGGCTGTCTCGGCGGTGTCCAGGCGCCGGCGCCGAC
GACCGCGAGGAGCAGAGACAGCGCGGCCCAGAGGCAGCACGGCATGGTCCGTGCGTCGCC
GCGAGCTGCGCCTCTCTGTGGGTCGCGGTGCGGCGCGCTGCGCTCACGCATCTACGCACA
TGGCGGCCGTCTCGTCGCTCGGAAGGTAAACGACTCCACGACTGATCGACTGCAAGTGCT
TTGCGCGGCGTGCGTCATTTGTAAACAAAGGGCGG
(3875 bp)

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