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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64569_c0_seq3
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_DEAD-box_helicase_Dbp80_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0010501 P RNA secondary structure unwinding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0051028 P mRNA transport
Transcript
Level		FPKM:3.51 TPM:6.12
ORF EntryO_BomoEE10890_complete:A_BomoEE_comp64569_c0_seq3
Sequence
(Nucleotide)
TGGGTCGCGTTTCCGATCCGGTGGCAGATTCTGCGAAGCACTGCTCCCGCTATGGCTGGG
GCTAGCCAATTCTCTCAAGTTTAACCCGTGAGCTTTTACCAACCCATCCACACGAAGCTG
GAATAGGAATAGAATAATAGGGAAAAAAGTGGCTGATACATTCACCTCTCATTAGAATAA
GTGGTGAAGTGGCGGCATATCAAACGGGAGCTAACGCAATATCTAAATACTTTGGCACCC
TGCTTTGAAGTCGCTTCGCGAAGTCCAACTGCATAGGACTGATCGACTTCCTAAAGTTGT
TGCGGTTGCAAGTGTGGAAATTCCTACCAAGACGCAAAAATGGCGCTCAAACTTCCGAAC
TACCGTTTTCAAGAGCAAGAGAATACTCTATTTTTAATTATTTATATTATTGTGTTTATA
AATATATATACATAGGTACATACGCCGCGGACAAGCTTGACTTCGTATTAGAACTAATAT
AACGTATCTACTTCTTTTTACTATAAGATCATTGCTAAATAGACATTTATTTGGATATTT
TTTTTTTTATTGAATATTCACTATTTTTGTTAGTTGTTTGCCATAAGTAATAAATACAAA
TAATGTGTTTTGTAATGTAAAAAAATCCTTCCTGAAGAGCTTAAAGCAATATTATAATTT
AGTAATATAATTGCAGTATCAAGACTGGAAAATGGTAATATGGTAATTGAGTAAGAAATT
ACAAATTTGCTTTCTACACAAACATTTATTATGATGGTTATCCTGATAAGAAGCAATAGA
TGAGCATTTTTAAATATAAAAAGTAGAAATGAGTTTTTTTTTATCAAATATAATTTTGAT
TAAGCCCCAATCTTTTCTATTTCTTCTGCATCTTCAATATCCAGTAATTGAATTTTCTTA
CCAAAGTGTGCTTCAATGTCTGTACAGATCTCCATAGCTTGTGGAGAGTCTATGAGGTTA
ATTGCAATACCAGCTTTTCCAAATCTACCAGTTCTCCCAATTCTGTGCAGATATGTCTCA
CAATCTGCTTTTCTATTCATGTCCATGGGCATGTCAAAATTGACAACTAAAGTAACTTGT
TCAACATCAATTCCACGAGACAAAACATTAGTTGTGATCAATACTTTTTCAAGACCCACC
CGAAAGCGATCCAGTACTGCAATTCTCTGCTCAACTGTCAATTCACCAGAAAGGACAGCC
ACTGAGTGACCATCCTTTGACATCTTTTCAGACAACCAACTTGCAGTCTTTCGTGTATGA
CAAAATATAATTGCTTGACCAATTGTTATTACACCATAAATGTTACAAATTGCTCTATAT
TTGTCTTCTGCACTTTTGCACTTTACATAATATTGTTTTATGTTATCCAGTGATTCTTCT
TCTCTCAAAAGTCTGATTATAATTGGATTAGAAACAATTATCTCAGCAAATTGCATGACT
GCAGTACCATATGTTGCAGAGAAAAACATCATCTGACATGTTGATGGTAAGCATTTATGA
ATTCTAATGCATTGGTCTTGATGCCCTTGTCGATTGATCATGACATCTGCTTCGTCTAAC
ACAAAAACTTTAATTTTACCCATATCAAACATGCCAAACTTGACACCCCAATCAAACATC
TTTCCTGGAGTACCAATAAGAATGTGATCTGTGATTTTTGAACCCCTGGGAAGTTCTTCC
CCTCTAACTGCATACTTTAACTTTATTTCAGGACAAAATTTTGCCATTTTTGCAGCAACT
TCACCAGTTTGTATGGCTAGTTCATATGTGGGACTAAGACACAATACTTGAGGATAATTC
TTGTTAGAGTCAACTCTGCTTAACATCGCTAAAACAAAGGCAGCAGTTTTTCCTGTACCT
GATTGTGACTGGGCTATCATATTCTGTGGAGGATCAGCTAAGAGTGTAGGAAGTGCTGTT
TCTTGAATTTTAGATGGAGCATTAAAACCCATAGCATAAACCCCTTTCAGTAAATTTGGC
TTCAAATGCAAAGCTTCAAATGTTTTTACAGAATACAATGGTGAATTAGGGTCTTTTCTC
TGTATTTCTATATCTAGTTTAGATTCAACTAGACCTTGCCGTATGATTTTCATTAAAAGA
GAAGTATCGGCTGCATTAGGGGTATCAGGTACATCATCAGAATCTGTTTCTTGATTATGT
TTTTTATCCAAGCCCAGCCCTGCAACTTTATTTGAAATCTCCAACTCTTCTGCCTTTTGT
CCCCACTGGCTAGCCATATTTATGACTTAGAAGAATTAAGTGAAATATTAGTTGAACACC
AATTCTTCCCAACAAATCTTTGTTTGTTCTTTGGACGTAGTAATTATTTTATCCTCATTA
GTTCGCTAAGACCAACTGAATCATTAGAACTGATCCTTTCTTGTTTTTACACTTAAAAAC
AATGTATATGTACTTAGCCACTAACCAACTACTTAATACTACACCTTTATTTCTACTGTT
TATGATCCAATAAGCGGCAACAAGCAAGACAAGTCACTCACTCACTATCAATAATTGTCA
AAAGTGTTTTTTTTTATGGGATTTTACAACCTGG
(2554 bp)

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