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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64527_c0_seq1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_dystroglycan_isoform_X4_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
Transcript
Level		FPKM:9.46 TPM:16.50
ORF EntryO_BomoEE10806_complete:A_BomoEE_comp64527_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTTAAAGTTATTAATTTTTATTTAAATTAAAAGCTCATTAATTATATAAAT
CATGTGCGTATAATGGAAAATAGCATGAAACAAAAATATATCGAGGGTACATAACTATCA
AATAATGAAAATGGTACGGTTTTAGTGGACAATATTAAGTACATCTACACAAGAACAAAA
AAAATCGATTTAAGCCGATCCATATAATTGTATACATAATGTAAACACTAAAAAGATCTA
TAAATGCCAAACTCTAAACGAGTACAGAGTACAAATAAAAATACATCCAAAGAAATAATA
AGAAAAAAATCAGCTCATTTCGTTCGATAGTTGCCTATAGTTTATACAATTTGTTAACCT
TACATCTATGGTAATAATTAGACAAGTACAAAATGATATTTCATCCTTAAAAATATCTAC
TAGTAACCTAAAACTAAAGTCAGTTGTATATTTTATTATAATATTAAGTTAATTGTATTC
CATAGTGTACAAACCATCTAATATTGAACAACCCATGCATTGTATATAGCGTATTCACGA
CAAATCATTTCATAAGGACTCGTTATCACAATGTAGAATTCGATAACGTAGTCCCGTATT
AATGCAAACTCTACTGATATATCAACATAGTGTATGGAAGATCTACGCTAAAGGCTAAAA
CGTTACATTCCGATATGTTTTTTTAATTTTAATTACCATAAAAAAACAACTCTCGAAACA
ATGGCACTCGATCAGCCAAATACACTAATTCATTGTCATTCAAATCGAATAGTAAATAAA
TAAGTCGTTTCGCTTATTGTAATTGACACAGTCACGCATGTACTCTAGGCAGTGCAAGTT
TAAACTATTTGGTACCACAATCCATATTCGCGTTACGAGTTAAGAGTTATTAAATAGTCG
ATTTGTCGGAACCGTGCCTTATTCTAGGAGCTAACGTAACATTGTCTACTCCAACAAATT
CCACTACCGTTTATTTATATATATATATCGAAATACTCAGCGTGAAAACACCGAAACATC
ACAACGTTACAACTACTGTCGATCTAATTCGTGAATATATACTTTTGTATAAGAAATTCG
TAATAATATATGAAAAAAAAAAAACTGCTCACAATTCCTTGTTTTAACGATATGAGTTTC
CTTACTAATTTAATATAAATGCAATTTCGATTAACGCTAATTACAGAATTTTAAGCGATT
CAAATTATTAATGTATTGAATGATTTCAATTGCTTCGACTAGCGGGTCTTAAACACTTTC
AATGATGATTACCGTACCGGTTCCAATGTGATTCGATAAGCTCTCATAGGATTTTAACGA
CGCATTTGATTCAGGATGTTGTCTCAGCCACATCTGCGTTCAGAGCGACGGAGCGAGCGG
GACAGGGAGAGGGCATTAGCGTCACGTAACAAAACACGATCACTAAATTAACAGTTTGCA
GAGTTTAGTTGAATTCGTCGCGCAGATATGGAAGTAACAAAACACGATCACTGAACTAAC
AGTTTCAAGAGTTTAGTTGACGTCGCAAATAATCGAAGCTTCGTCGCGCAGATATGGAAG
AGTCATTAGTATCGCCGCACATGGGCCACCAGCCACAACCATAAAACGCAGCCACCGACA
TATTACCTATTGTTTTCATACATTCTATATATGGACTCGCCACACGCTACATATGAAATG
TATAAAAATTACAGGAAAGATGCCGGGGCGGCTTTTGTGGTTGTGGCCTGTGGCCCGTGT
GCGGCGACCCTTAATAATTATAATTGGAACGCGGCTACATTACGAGCTAAGAAATGGCGG
TGGAGTGATTTTATGGGGGCACGTATGGCGGAGGTTTTCTGTAGGTAGGTGTGGCTTTGG
GTCGCGGCGGAGTGCGGGACGCGGCGAATGGCGGCGGCGGACGGTACGGGGCATCCTCGC
CCGATAGACTATTACAAGTACCTGTAGTCCGGTGCGGGCGGCAACAATGGCGGCTTCTCT
TCGCGCATTATAACAGGACTTTTGTGTATAGGTTCGGTGTCTGTACGTTCTTCTAATTCG
TCTTGAAATATAACGGGTATGCCCTTCGAACGGAACGCTTGTCGCTCCTCCTCGTCGCCG
ACACTCATTTTACCTGTCCGCCGCCTCCGGTACAGCACGCAGGCGATGACGCCGGCCAGC
AGTATCATGCACACGATGACCACGGCCGGGATGATGAACGTCACGAGGTAGCTCTGCTCC
GCGGCGCTGCCTGTCTTGCTGTTCTGCGAGTTGGGCGCGCCGGGGTACAGCGCCGGTGGG
ACCTTCGATACTTTGGTGTTCTGCTCCGCGCACAGGCCGAGCGGGTTGAGGGTTATCGAC
ATCACTTTGAAGTCCTTGTCGAAGACTTGATCGACGTTTTCGCGGAGAGCGCCTCCTCGT
GAGCCGCGATCATCCACGATGATCATCTTGCGGAGTTGCTCGATTTCCGCCTTCGGGCAT
CTGTCCATTGGCAAGCTAGTGTTGTACCATATAATGGAGGTAGGATTATTGGTAATGCTT
TGTATCCTAATATTATCAGTCTCCTTTTGTCCAAACAGGTTGGCGAGCTTCTCGACAACT
TTACGCTTGTTTTTAGCGTTGAAGGCGAGCTTCAAGAACGGATACTCCAAGGTCATCTGG
AACTCGACCGTGGGTCGGATTGGAGGCGCCTTCACGACCTCCACTATTAAACTGTCGTAC
GCAGTCTTCTTGCTGGAGTCTTCAGCAATCAGTTGATAAGAAACGCTGCCCTCGTCCGTA
GTAGTGGGCAAGCCGTAGAACTCTTGGTTATTGGCGTCAAACTGTAGCCAGTGCCCGGCC
GGGATCTCGGTGCGGTCGCTGTACCGTAGCGACAGTATGAGGTTACGGGTGCCTCCGTCT
TCTGGGTCGAAGAATGTGTCCTCGGGCACTTTGTAGACGAGCAGGTGTCCGGCGGAGGCA
GTGATGTGGTCGACTTGGTTGCGGGTGACGGGCGGGTAGGTGTCGGGCGCGCGGGTGGCG
GGCGGCGCGGCGCACACCCCCGCCCCCTCCCACCGCACGCCGCGCACGCCCAGCTCCGGG
GACATGGCGCGCGACAACAAGCGGGACCCGCGACCCGGCTCCGACTCAGACTCCATTATC
TTCATAAGTCTATTGATGTCATCCATAGGACAGGCCGCGTCTTTCGGCAGGGTATCGTTC
GTCCAAACGAACTCGCAGAGATCTCCCGTTTGGGTCGCGTTCAACACGGTCAGATGGTCC
ATGTCGGTGTCCCGGAACAGATTCACTATTCCCTCCAAGGCCCTTATCTGCCAGTCGATG
GCGTTATTGTACTGCTTGAGCAGCGTGAACTGCATGATGAAGCGGTGGTTGATGGTGCGT
CCGCTCTTGTGTTGCTGCACGGTGATGTCTAGCGGGCCCCGGGCCTTGAGGCCGGCGCTG
TTCTGAGCTTCCACTATGAAGTTCCAACGTGAGACGTGGGCTTCCAGCGGTAGTCCGTAA
ACTTCAAGGTCGGACGGTATGAATTGTATCCATGAGTTTTTGCTTAAGGGGACGTTTTCG
GCTTCGTACATCGTGAAAGTCAAGTTGCTCCCGTCCTCCTGATCCATGAACAGATCGGTG
GGGATTATGTATCTAAAGGCTTTTCCAGCAGTTATAGCGAGTTTCTTCATGTGATGTTTG
AGGACCGGTGGTTGGTTGACAGGCATCGCGAAGGTCACCGTCTCCGTGGTTTGACCAATT
ATTGTGCTCTTACCCTCCGTCACAGTGGACTCCTGTTTGGTGACCTCCTGTATAGTGGTT
TCTGGTGGATCGGTTGTAGTCGGTACCGTTGTCGGTACAGTGGTCATCGGCGTAGTGCTG
GTCGTCGTAGTGGGCGGCGGCGTAGCGACTGGCGTAGTCACCGGCGTAGTCACAGGCGTC
GTAACCGGAACAGTGACCGGCGTCGTGGCCGGAGCTTGGGTGGTCGTAGACGTCGTCGTA
GAGGATGTGGTAATCGGCTGCGTGGGTGGCTCGGGGGACTGTGACGTCACGGTCGGGGGC
GACTCGGACGACAAAGGCGGCAGTTCGTTTGACGCGCGTATCATAACGGTTTGCATTTCC
GGTTCCGTCGTGGTTGGAATGTAATCTGGCACAATGGCAACGTCCTCTAGATGTCTCGAT
GACACCGGCACAAACGTTATGTTGTTTGTTTCCGAAGCAGATTCGGAGTAAGGCGTTATC
TTCACGTCGTGGTCTTCGTCCAGCTCCGGTACGCCGACATCGTTCCGGCGCGCGTCCTCG
AAGTTCAGGTCGTCGTTGTCGTCGTCGTAGCCGCTGTAGTCCGCGTCGTCGTCGCCGTCG
TACTCCGCGTCGTACATGTCGCCCGACCCCTCCATCGGGGACTGTCGTTTGACTCTGAAC
GTGGGCTTGACGGCCAGGAGTCTCCAGCCGATGACGGGCAGCCGCAGCAGCTGCTCGAGC
GTTCCGTCGCGCGACTGCTCGCGCAGCCCCGCCACCAGCACCTTGTGCCGATCCCACAGC
TTGTTCCCGCAGCCGACGTTCAAATATATGGCGGTTGTGGCATCGCCTCGTTTCCTCAAT
GAAGAACCGATTCCGCTTAATATCGTGTCCGGATGCGTTTCAGTCTTGTAAGGTTCCATC
CAAAATTCGTCCCCATCAAGAGCCATAAAGTTTGCGAGTTGCATCAGGGCTCTTATTCTC
TGTCGAGGCACGATCTTGTGGAACGCTCCGTCAACCAGAATAAGGAGAACCAGCCTGTTC
TCATCTCCGATGCACGTCCCGTATTTCGAATGAGGTTTGTCTTCACCCTTTTTCACCTCG
ATAGTGAATGAATCGGTTGCAGTGAGTCCTTTGGTAGTTCCGTGAGCGGTGACGGTGAAT
GTGTGAGTTCCAATGTCCTGGTACTGTGGGATACCGCTAATAAGACCGTGCCTCGAATCC
ACCGCCAGCCAGTTCGGTGTACGCCTCCCGTGGTCGCTGCGAACTTTATAAGCAACAACT
TTTCCGGAGAACGCTTCCTTGGGGATTTCCATGCGGAACAGGTGTCCTACATAGGCCAAC
GTGTCGGGTACACCCCATAATCTCCTTAGGCCATTCTTAGCTATCTCTGAGTGGTTTGCC
GTTAATTCAACCTGGAATTCTTCGCTATTGTCGAAAGCGAAGTCGTCGTCGTGCCGACTG
AGAGCAAGAGGACACAGCAAGAGTAGCGCGCACGCGATGTACCTTGCGCACCCCATCTTC
AACACTCACGCACAATGCTCCCAACAACTCTCATAAACTCATCTTGATGATTTGTTTATA
TTGAAGCCGAAACGGACGGCGTTTCAGGAACTATTTAACCTTGAGACTTCTTAACAAATC
TGCTATAATTGCAACCAAAACGACACGATTTTGTTTCAAAACTTTGGTGTTTTCGATCAC
TTAACACATCAATTGCTAACACTAAATTCTGGAATACAATTAAATTTATTCACTGAATTA
GTCACTTTCCTTTTATATTTAGGGTCGATGTAAATTATCTTTTGTTGGAGTGTAAGCGTC
TGTCGTCGTCAGTGACGCGGAACTATTGACTGACGACTTGACGAGGGCGACGACTGTCGG
CAACTGACGGTCGCCTCCCGAGTCGAGCGATCGGGCCACCGGCCTACCCAGCCGATTCAC
GTCGAACCATCTCTAGAATCTTGATCGCCCTCGCGACGAGTGTCGATCAGCAACTTCGGT
AGCTAATCCCATGACTCAAACTATACATGAAATGCCAGCTGGCCACTTTATTTCTAACCG
GCTAA
(5765 bp)

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