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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64521_c0_seq2
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.96 TPM:1.68
ORF EntryO_BomoEE10792_5prime_partial:A_BomoEE_comp64521_c0_seq2
Sequence
(Nucleotide)
ATTTATTATACAAGTAATATCTCATTTATTACAGGGCTTTTATCAGACTCGTTTGAAATG
ATGACCTGATCTGGTGAGATGTTATCAATTTCAGTTAAGGATGGCTTTTATTGGATGACA
TTATAGTTATTATCTTTAAAAAAATCTCAATAATTTCTCAATAAAAGTTCTCTTCAGTTT
CTAATTTAAAAAAAATATGTTTTTAGATAAATAGGTGTAAGGAAGGCCACATCTTGGATC
ATCTCCTGTTGGGAATAACTGGGTTGATAAATAAATAACTTGAACTTGAATAAAAAATGC
CTCACGTATATTATAGAAAAACACTTTACATACATGAACAGACGAAGTGACAAGAGAAGA
AAAAGTATAGCCAATATAATTGGTGCAAAATCAGTACTGGCAACATAATAAATATGGGTG
CGTTCTCATATTCCAACACTCCCTCCTGAACGCAAACCCATTTTACTTATAAAATACAAA
TGTTTTTCTAGCGTTACACCCTTTGTTAAATTATCAGCTATCATATTACAACCATTAATA
AATAGAAATTTAACTTTACCCTTTAATATGTTTTCTCTAAGAAAGTGTAATCTAATATCT
ATGTGCTTATTCTTAGGTTTATAACAATCTGTTGACGCTAGTCTTATTGCACTTTGATTA
TCGCTATAAATAACTAACGCACTGTCCAGACCTTGGCCCAGTTCTTCTTGTAGTTGACGA
AGCCACAAGGCCTCCTGGGTCGCCGACGCCATCGCCATATACTCGGCCTCTGCTGTAGAT
AGGCCTACAGTCTGTTGCTTACAGGAACTCCAGGATATGCATGCAGTTTGATAGATAAAA
CTGTAACCTGTGCATGATCTCCTGTCTAATGGGTCACTTGCCCAATTTGCATCGCAATAC
CCAGTTATTGCTTTAGAGTCTTCTTTGACATAACATAACTTGAGATCCTTGGTGCCCTGA
AGGTATCTCATGATCCTTTTAACTCCAAGCCAGTGTTGAACCCCTGGATTATTACAGAAC
TGACTCAATTTATTCACTGCAAATGTGATGTCAGGTCGTGTTACCTGTGCCAGATATATA
AGACAACCAACTGCTTGCCTGGAAATTGCTGTTTTCATTTTCAGGTTTCTTATCAAATTT
TATATTTACCTCTATGGGAGTATGCACTGGTTTGCACTCAGACATGCCACACTCAGACAA
GCCAAAGCGTTCTAAAATTAAATTGATATATTTCTCCTGGTCAATCATAATCACACCTGC
CTCACGGTTTCTTTTAACGTTTATACCAATACATTGCTGAATCTCACCTAGGTCTTTCCT
ACAGAACTCTAACATTAATTTTTCTTTGATTTCTATAACTGTATCTTTATCATTTGTAAA
AATAAGAAAATCATCGACCCATACTGCAATATACCTAGTCAGGTCATA
(1428 bp)

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