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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64470_c0_seq3
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
Ontology
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:26.65 TPM:46.49
ORF EntryO_BomoEE10724_complete:A_BomoEE_comp64470_c0_seq3
Sequence
(Nucleotide)
ATAAAATATTAGGCTGTATGGTACGATACATTTGCCTTTCCAATTGAAAAAATTGAATTA
CTGTACTACTTTTTTTGACATTTGACAATAATATATTTCTTTCAGAATTCACACGTGAGC
TAAACAAGTTCGTTTTGCATAACGAATTATACACATGTAAAGTTAATATCGTGATTAGTG
TTCAGCGCAATGCCGAAGTCTATCAAGCATCTGATTGTGGATACCTCTGCATTCATAAGG
GCGGCAAACCTTCAAGACATTGCTGAAAATGTTTATACTATACAAGAGGTTATTGATGAA
ATAACTAATGATAGGCAAAGAAAAAAGCTCGTTGTCCTTCCATACGACTTAAAAGTCAAG
GATGTCTTCGCAGATAACATAAAATTCATTACTGAATTCTCGAAGAAAACAGGTGATTAT
TCTAGCCTCTCTGCTACAGATATTAAGGTTATGGCACTGACCTACCAGCTAGAGAAGGAG
AAGGTTGGCGGTACGGAACATCTCAAAGATGAACCGACTATGCAAAAATCTGTTAAAGTT
ACAGGATTGGCTGGGTTTAACCTTCATCCCAATTATGAAAATGCCAATCAGGAAACAGGT
GAGAAAGACTCTAATGCAAACAATAACAAAGAGACCAGTGAACCTTTACAACAACCCATA
GGAGAGACTGTGAATGTTGAAACTGGAGAGTCATTTGAAGTCAAACACCAACAAAACTGT
CAAACAACAACAAATGAAACTGATGATGATAAACTGGCTGAAGAAATTTCAAAACAAATC
AATGATATGGATTTGAAAGATGACAAAGTTGATGAGCTAATGGTTAAAGTCTCTGATGAA
GAGGCTACAGACAGCTATGATGATGATGATGATGAAGACGAGACAGATAGCGATGGTGGA
GAATGGATCACAACCAAAAATTTGGCTGAAAAACGAAAAGAGATGGAACTTGGTGAATTC
AAAGAAAAAGATGTTGAAGTTGCCTGCATCACTTCGGACTTTGCAATGCAAAATGTTTTA
AAGCAGATAGGACTAAATGTTACATCAATAGATGGAAGAATTATAAGACAATTACGTACA
TTTATTTTTCGTTGCACAACCTGTTTCAAAACAACTAGTGTAATGACAAAACTGTTCTGT
CCTAAATGTGGTCATGCAACTTTAAAAAAAGTTGCAGTGAGTATTGATGAAGATGGTAAT
CAAAGAATACATATAAATGGACGTAAACCTTTAACAGCAAGAGGAAAAAGATTTAGTTTA
CCTACACCAAAAGGTGGTCAACATTTTCAATACCCAATTTTAACTGAAGACCAGCATATA
CACAAAAGATTTGTTACCAAATTAGCAAGAAACAAAACAAATGCTCTAGATCCTGATTAT
ACTGCAGGATTTTCTCCATTCGCAATGAAAGATGTGAATTCCAAATCGGCTGTCTTGGGG
GTGCGTGCCAACAATCAGGACATAAAATATTGGATGAAGCATTATTCTAAAGGAAAGAAG
AAATAAATTGAAACAAACACATTCTTATTTATTAACTAACTAGGTACATAGACATAAATT
TAACATTAATAAATGCTCATTCTTAAACATAACCAGAGAATAAAAATTCGCTATTATAAC
AGAGTAGTACCACGTGAATATTCGTTTTAATCCATATTTAGTATTTCATCAAAGTATTTA
AAAACAGAATCCATACACATGTATGATGTCATTTCATGTTTCTCATGACCTGCAAACAAA
GTTTTCTTATATATTTGACACAACACAAATGCAGAGTTTCAGTGGTTTAAGTCAACCTTT
ACCAATGGTTGCTTCAATGTTACTATTGCAGCACTTAATAGTAAGCTTTTAGCTGAACCA
GTGATTAATGCTCAGTGTTACTCATGGACAAAGGCAGTGCAAAGATTTGGATAAGTATGT
AATTATAATCTAGAAAATAAGTTCATAGAAGAAAGAATAGCCATAGTCTATTCCCCTTAA
AAACACAAATAATTTGATTTTATGAATGCAATATTTATACCTGCTGAAAGTCTGGTTATA
TCGAAATCAGGAGTTCTGAGAGGTGTATCCAGCGGTGTCTGACTAGATATCCAATTCTTT
GTAACCTGTAATATCGAGAAACCAATTAGGAAAAGTTAAATTTCAACTGTGCATGCCTCC
AGTTACATTCTTACCTGTTTCAAAAAGTTTGTAAGCTTCTTATTAGAATAGGAATGTACA
GAGTCAGTAAAAGCAATGGCCTTTACTCTGTCTTCAAAGTCATTTTGCACCTCTTCTGCC
AGAGAAACCGTGACAACCCCACCATAACTATGTGCTACAATGAGTATGGAACTTGCATTC
GCATTGGATATGTAGTTCAGCCATGCGTAAAGGGCATGTTCCTCAGCGGTGCTACTGTTG
AGAATGGTCTTTCCATCTGCTGTGTGATTGTCATTTGTATTTAGTACCACTACTCCATAG
TCTTTGGCCAAAGCCTTCTTGATATACGGAATCTGAGATCCTTTGTCCAACGATTCATTG
ATTATGAGGCTGTGACAAAAATTACATTTCAGAACAAATATACTGCAGGCCTAATTACGT
GACCTACTTTAAAACAAGACATGGGGAAAACAAAAAATATGCATTGATTACGTACATATT
AATACATAGATGAATAGAGTATTGCCATTGTGAAAGAAGAACAGAAGGGTAATACCATCA
TTGTACCAACCAAGGATAATGAACAGAATCAGGAATTGAGCCACCATTATATACATATTT
CTATATTAATTTTATGATTCAGTACTAAGAAGAAGTTTCATGTTATATATCCAAAGTTAT
TAAAGTACTACTCAAAAATGGCTTTGCTTGTCTAAATTCAAAATAACATTTGCATTTTGA
ATTTTATCTCATCATCAATATTATTTATTTTTAATTTTAAACATACTTGAAACCAAAATT
TAGTAATTAAGTCATGATACTAACGATCTAGCCCACTGACCAGCTCGCACAACGCCTGAT
CCGTGAATCAATATTAACAGAACATCTTTTTTATCATAATCTTTTGAAACAAAAATAAAT
GTTCCATCATTTGAATCCTTTGGGATTGGTAACTTTTGCAATCCAATCTGAGTCTGAAGA
ATATCATAAACATAATTGGTGATTGCTGAGCCAAGTTCTTCATAATGAGCTTGGCATTCC
TGGTGATCATTGCTCACAACAAATTGGAATGGTTCATCTGTTGGCTGTCCATCAGCTCCA
ATTTTTCTTACTTGACCATTTGAATCAAATATGTATCCCAGTTCCTTCATAGTTTTCGTT
CCCTCCATTTTGTAATGCACTTTATTAGCACTAGATGCAATCGACTTTCTGTGAGGTCGC
AGTCGTACTTTTGATATCGACGTGCGTACTGCGCGAATTACATTCATGAAAGCTGAATTT
ATATGCATCTAGGTCTTGAAACTGAAAAATAAACAATCCCCAGGTCCCGGGGTTGGAACT
TGACAGTTTGGACTTTGACGTTTAAATAGATAGTCCAAGAGAAAATAGCACATACAGCCA
AGTTAGTCGACTGGTAAAAAACCGAAGTTATATTTGTAACTAAATTAATAAAATAGTGGT
ATTTTTAAAATAATATAGATGGTACAACGTTAATTAACAGCATTTTCTCATGTTATCAAC
TAAGATTCATATAAGTTAAAGTTAGTAGCATA
(3692 bp)

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