SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64361_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_neural_retina-specific_leucine_zipper_protein-like_[Amyelois_transitella]
Ontology
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007468 P obsolete regulation of rhodopsin gene expression
GO:0007601 P visual perception
GO:0043522 F leucine zipper domain binding
GO:0043565 F sequence-specific DNA binding
GO:0045872 P obsolete positive regulation of rhodopsin gene expression
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046548 P retinal rod cell development
GO:0050896 P response to stimulus
Transcript
Level		FPKM:0.51 TPM:0.89
ORF EntryO_BomoEE10624_complete:A_BomoEE_comp64361_c0_seq1
Sequence
(Nucleotide)
GGAGGCAGCGGCAGAGGCGCCGGCTCGCGGCGCCCCGCCCTGCCGTCACAGCTCCGAGAA
GAACTCAGGTGAAGAGTGCGGCGTCGGCGGTGCGTGCTGCGGCACGGCATGCTCACGTCC
CATCAACGCTAGCCGCTGCTTCAACACGTCCCGTTCGTGCGTCACACGGGCAACCTGCAG
CTGCAGCACGTGGAGCTCATCTTGTAGCGTTCTATTAGTCATTTCCAACTCTTGCCGCTG
CTGCAATCTCTTACTGCGACAGTTCTGCGCGTACCCGCGGTTTTTAAGAGTGCGTCTTTT
CTGTTTTAGGCGCGTTACATCTTCTCGTGGGAAACCGTGCAATCTCTTATTCAGCTCACG
CACGCTTAAGGTCATCAGTAGATCGTCACTAATCAAATCGTCCCCGCAAGAGGATGGCTG
ATATGATGGATGCGGTCCGTTGCGAGGAGACATTGCCGAACAAGAACTAGCTGGGCGCAG
TGCGACTTGTTGTCCGTAATGATCTTGTTCTCTCCACTCGCGCCTGTCCCATTCTTCAAA
ACTTCCACACGGCACTGTACGCATGTCAAGAGGCTCTCTCATATGTGGTAGCCAGAGTAC
ATCGTCAACTAGGGCGGCACGACATGGACTACGGCCAATCGTCGCCGGAGGGGTTTCAGG
AGGTGTACTGGGATCAACAGCGATAGCTACATGCGGTTGTGGATACGGTCCCGCATCAGG
CCAGGGTCGGAGAGCACGAGCACATGCCGGCGGCGTTTGTATCAATTCGTACGCTCCGCC
ACGAAGCGGCTCACGTTTCACCAGGTTGTGATCTTCGAGATGGTCCAGCTCAAAGTTCTG
TACGTATTCATCAGCGAGCTGATCGTCATCAGCTTCGCGATGCGGCTGCAATGGAAGGGT
TTGCATAGCGCTCGCCTGAGAGCAATCCACGACCGCGTGCTCCACCATGGGGCCGTGCGG
GGCGCACGCCGGCCTGAAACGGACTGCCGCCGCGACACAGGGCGGCGCGAAACTCCGCCC
TCCAACCCAATGACGTCTTGAGCCATGCGCATACACTAATAACCTTTATTCTCTGAATCA
TAAGCTCTCTTCTTATTAAATACTGTATTATTATGATTATAAGTCACAACATAAGAAGCA
TAAGCTTAATACACAGAAGTCAAAGGCAAATATAAAAGTTAATCCACATGAGCTTTAAAA
TTTAACGAATAATTCATTGTCAATTTTCAATAAGTACATTATGGACGTATTTAAAAGAAA
TCAAGAATTAAGGCAAAATTAATGAAATTTCGAAAGGAATGAATACTAAGAAGTTTAAAT
TGTGCACTTGCTCCGTAATAAGTAATGCATACAAATCAAACAATCAACTTTGATAGTATC
TTAGGTACCTACTCCTTACTTTGACTCAGCTTAATATGTATAATAACAAATGTAGCTTAA
GAATAAAAAGAACACACACTTGAACAGCAAACTTATAATTTCATCATTTTTTTATCCTCT
TAATACAGGTCAGATTACTAGAGCGAATTATTAAAAATATCGTATTATCACCGGCCCCTG
ATACGTTGTAAATATTCAAGTTGATCGGACGTCTTCAAATCGGTAAAAATGTTCAATGAT
TCCGTTACATACAAACAAATATACACACACGTACATACCAAGCTAATAAAAACGTGTCTG
AAAATAAAATTTACATTCCATCTTAATATTTATTAAAGTTGAATTGATGTATGTAAAAGT
TTAACGTGGGTTTCATCCAACTTTCTTTAGATCGCTTCGTTTATCGTCCGCCCGGCGACT
CTGAGTAAGGAACCACGGGACTCGGATTTAATTCTCGATCAGAGTCTTGGTTAATTATAT
TCGCAATTTAGGGTCTGCATAAATGCAACCTTGTTAGTCACAACTTGTTGTTTCATATAT
GTATTTCCGGCATCCATAACACAAAGATATTCCTCAGAGCCAACCCTGAAGCCCTAAAAT
CCTAAGACTTTACTGACTATATCTATTAACTTTCTTGTCGAATTTCTACCAACCATAATT
CATAACAACTCAAGATCATTGTGCATCACATTTTCGCTTTTGTTTTCTTTATTGAAGTTT
TTCTCCTACAAGTAAAAAAAATAACTCAATTTCTTAATAGCACCGAAGCTATAGCATCAA
TAAAGCCACGAAGCAAAGAATAATTTAGTGAAGTGTTCTTCTATCTTTGCTTATTTAAAT
ATCGATTCAGTCCGCAAAACGATTTTCTATTAAACTCCTGATGAATTGAGAAATTCGTGG
CACACTTTTAAACGGACACTTGAAGCTCATAGACAATGACAATAGTATTTTATTGGATTA
TGCGAGACGTAGACATATTAAAACTATTACGATACCGTCCACCATGTCGACGAAAACTGT
AGAATTTGAAACGTCGGAACTAATATAAAGACAAGAAAAAACGCGACATTAAGCCGTTAC
CACTATAGCGTATGGGTATAGCGTCAAACCTCCCTCA
(2497 bp)

- SilkBase 1999-2023 -