SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64266_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0016020 C membrane
GO:0031252 C cell leading edge
GO:0045111 C intermediate filament cytoskeleton
GO:0045180 C basal cortex
GO:0045184 P establishment of protein localization
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:1903690 P negative regulation of wound healing, spreading of epidermal cells
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
Transcript
Level		FPKM:10.15 TPM:17.71
ORF EntryO_BomoEE10476_complete:A_BomoEE_comp64266_c0_seq1
Sequence
(Nucleotide)
TTTTTTTATATATTACTAATTTTATTCTCACGATGATTAATAATGATAATGTGACCTTAT
CGAATAAAATAAAGTTGGTATCAGGCGTTTCAACTAAAACTATGTTACAATGTTGCAAGC
TACAAAAAAAATAATCGATATTTTTACACTGGTACGACATTCTGTAAATCATCACATTTT
AGTAGGTACTTAAACCAGAAAATAATTAAAAGTACATGCATATTGGTATAATCTGAATAG
CATTAAATTACAAAAATAATTAATGATAATTAAAACAGGCAAATTAACTATTATAGTTTC
GCGTTAAAGTAACTAGAGTTGCCATTTTTAAAATTATAAAATTCCTAAATTGTAATTCAA
TTTAAATACAACGTAAATTTTCATGATGCAATAGGATAGTTAAAACGACAATGTAAAGTT
GCCTTTTATAAATAAATACAATAAAATGGTAACATTACATAAAGCGTTGATTTAATTAAG
CAACGATCGTTTAAAAGTTCAGCAAACATAAATCTACAAACATACAGATTTTTAGAAACA
TTTATTTATGATGATTCCTTTATAGATTTATAAATATAAATCAATATAGTTAATTTTTTT
GTTTATTTGTTTTAAAAATATTTATTTAAAAAATATATCATTGTTGTATAAATACATAGA
TTACTACATATATCTGTATTTATTATTTTGAAACACTTTTATTTTGTACCGGCAAAGGGT
TTTTTTATTTTATCACAACTACGACTACATTTGACAAACATGTTGTCTTCGTTAATTTTT
GTTCAGTCTTATTAGAAGGCACCTATGAATCCGATTATTTACTAAAATACGTGTTATATA
AAAAATAGTTATACATAATGTAATGTATATAATATATATGAAAAGTCGGCGAACTTTACC
GACTAGATGTTTGATCGACACATGTCTTAATAAAATATTGTACTAAATGTTTTGAATTAA
ACTTTGTAAGCGGTTTAAGAGTTATATGAAATTTGTATTTCGCATCGACATCTTGTTTTT
ATTTATTTATTTATGTCGTATAAGAATCCAGATATAATGCGACTTTAAGATTCACATATA
AAAATATACGTTCCCACGTTATTTGTACAATATAATTGGCACGATTGTTTTGTGTGTAAA
TATATATAAATACATATAAATTTATATGTGTTTTATATAAAACGTACTTATTTAAAAAAA
ATACTGATTCGTTTGTCTGTTTGTTTAGAAACCTATACATTTTACCCACTTACGCACTTA
ATGTGTACTCACGAGAATGCATTAACACATTATAATTACATTAAGACTATATTCGTTCAG
GAATCAAACAAACATAAGGCGCTTTTTCTTAAACACCCACTACACAATTGGAAAATTTGT
ATCGATATAATGCAACACCGTAGTGTTGCTACATATTCAAACACAAATGCATTAATTGAC
GTATTGTAAAAATTTAAGTCGTTTTCGAAATTGACAAAACTTTATTTTAATTCAATTCTA
TTGTTCTTTCGCTTTCAGAACGGTCCCTAAAATAATAATAATCGGCGACCAAAAAGTACC
GAAATGATCGTACAGCACGTTTGACAGACGTCAGATTTGACATCTGTCAATCGATGGTCG
CTGTCACTCGAGGTATTCGGTGTATCCCTGGGCGCCGGTGAATAGCACATCGATCCATAT
CCGGGCTGCTTCCCCGGACGGAGCCATTAAGTAGTAGCGTCTTTGTCTAGTTTTGACTAT
GAACGTCGTCTGTGGGTTCGGCGATTTCGACGTGTTGCCGTGATCTAAATACACTTCTTC
TATCACTTGGAAATAAGCACCGCCCCTGGGTTTCTTCTCACTCTTGTCCCAGTAGTATAC
GAAGGTTTTCGTTTCTCTGTCGAAAACGAACCATCTTTTGGACCACGTGTGAAACTTGGC
GCCCAGTTTATGTAAATACCCGCGGCACGAACTCGAAGTCACGCTCACGTAGGGGCAGAG
TTCGACTTGGTGGCCAGCAGACTCGACGTGTCTCCGCAGATCGAAGTCTTCCCTGTCGAC
GGGCAGGTACCGCGTGAGGGGCCTCTGCGACTCGCTGTAGGGTGCGATGCCGCGTCGGCT
GCGGCGTGGCGCGTTGCTAAGCGACAAAATATTGTCCCTGCTGAAGTCAGACGCGTGGCT
GAGCGGACGACTGTCATCGCTGCGTTTGTCTTCCTCAGTTGATTCGGTGCGAGAATTTCT
GACTTGCAACTCTTCAATCGACGATGAGAACAAGCCCGAACTCTCGTCGAAGACGGAACA
GTTTCCGATGAAGCTGTCATCCATGACGCTGGAGTCCTCTGGCGCCCTCCCGCCCCCCTC
TCCGGGCGATCCCCCCTCCCCGAGGTCTCCTTCGAAGGACCTCTCCCTGTACTTCTGGTC
CCACAATTTCTTCGTTTCGTCTTGTGCTCTTCTCTTTAGCTCCGATATCTTCTCTCTCTC
GTTTTCTATCACTTGGCATCCTTGCTCCTCGAGCATCTCCAGTCGCTTTCTCTCCACCTC
CATGAGGCTGTCCAGGGTCCTCTTGCCTAGCGTGTTCATATCGGCGTCGGTAGGCAGTAT
GGGCGCGTCCGTCGTCACCCGCGAGATCCTGTCGATGTCGTCCTGCGAGGGCACCCGGCC
GCCGTCCACCACGCCGGGCTCGTCGCCGCAGCTCCTCCTGTGCAGCCCCCCAACCCCCCC
CGGGGGATGCGCCTTGTCCGGCGACAATGACTTGGCCTTGACGTACTTGTTGTCATTCGT
GACCGGTTTCGCGTTCTTCACGTAACGGTTCTTGGCCTCGACTTCATCCGTCCCGCGGCG
TCTACCAAACGAGTCCCTCTTCATGATCTTCCCGAGCGCGGCAAACGTCGGTATTTTTGA
TGAGGAGCTGCTTTTGACTGGACCAGGCTCCTTTTTGGTCTTCGAGTGCCTTAAACTGTT
GAACCGGTCGAAATCGGAGTCTGAGTTCTGGATGTTATGCAGCAGATTCTCGTTGAGGCT
CTGCGTCATGACGTCGGCCCGGACGTCTGGAGGGCGGATTTTCTTTTTCCGCTTCAGCGA
ATCGAAGTTCCTTTCCCAAAATCCTTTCTTCTCTTTCGAAGAAGTGGAAGACTTAGACGG
ACTTTCGCTGTCGGAGTTGCGCGGGGAGGACCGGGCGGCGTCCGTGAGGGGGGCGCTGTG
AGGGGACCGCCTGCCCCCCGCGCCCCGCAGCGTCCTCATCTCCCCCTCTACGACCTGCAG
CCTGGCCGTAAGCTCCTCAACTTGGGTGAGGAGCTTGACGTACTCCGAGTGGAGAACCTT
GGTCTCGTCCAAGGCCGACGTCATGTTGCTATTGGCTTCGGATTTTAAAGTCAAGATGCG
CGTTTTCTGAGCGTCAATTTTCTTCGTCAGAACGTTTATTTCGTTCTGAATGTCTTCTTT
ATTCGACAGCAGTTCAGACTCCTCCTCCAGATGTTGAAACTCCAGATCCTCGAATATCTT
CGTTTCGTTGTCCAATATGTCCTGGGCGTTCTGAAGTTCCTCCACCGTGGCCGCGTTGTG
CTTCAAGTCTTTCTCGATGTTCTCGATCTTCATGGTGGCGATCTCGACCCTGTCTCTCAG
CTCAGTCTGCCTCGCCTCCTGCTTCTCCTTCAGCAGCCGAATGTCCTCTTCGATCCTTGT
CGCCTTCTCAACTAACTCGGTCCTCTTCTTCTGTTCGATGTTCAAGATCGCGATCTCCGA
ATCGTATTCCCCTTTTATTAACGCCTTCTCCATTTCCAGCTCTCGCAGTACGTCGTCCTC
TTGAGACCTGATCTCCGCCATCTTCATCTTAAGATCTTGAATTTCTGTGACCAACTTCTT
TCTCTCCTCCTTCAACCTCTCATATTTAGCTTTGAGTTCATCTGCATTATCATCTAAACC
CGTTCCATCAATAGAGTCCGCATCTGCGTCTATCTTCTTAAAATCTTCACTAATATTCTT
AATTATTATATCGTCCCTTTTGTTTCTTTTCAAATCCTTTTCGAATTCCTCCAGCTCCGG
TATATCGGCCATTAACTCCTTTTTGACGTCATCGAAACTCTTGTTCTTAACCAGGGTCGT
TTTTTCTTCTCCTGTCTGCTCTAAATCTTCAAGTTTCGTTTCGTTTGTTTCTATAGTCCT
TGAATATCTAAATTCTATGTCGTTGGGTTGAGCTGCATCGTCGATCATAGGTATCTCTTC
TTCGAGACTAAGCTGCTTTTCTATCCCGACTGCACTGGTTAACCGTTCGAAGTCATTGTC
TACTGTCGCCGTTTCATGGTTGACAACGTTATTAGCATTGTTGATAGGACTCTGCCTGTC
CAGTTCTGGTTTGTTAGGGCTGTCGGCGGGCGGCGGAGCGGGGAACACAAAATATTGAGG
CGAATTCAAATTTTTATGCGCGAAACTGGTCTTTATTTTCGTTCTGGGACTCTGCGTCGT
CGGGGATTTGGGGTTTAAGTTGTACATATTGTTTCGTAAGTACATATTCTCGTATGGGCT
CCCGACGGGCGAGGCGGCGGGGGGTTTGCCGCCGTTTTGGTTCCTCCTTATTGTTATCGG
ACTAGAGACGCTCTCGTCATCGACGGGAATGCCTATCTCGTCCATGCGACCTATGTTCCC
GTAGTTCCGCGGTATCGTGACCTCGGGCGTCAGTTGCTCGGGTTGCGGGGCGGGGGACGC
GGGATCGTAATTCTCATAGCTAGATAAGTTCCTTTGAATTTGTTGCGGTTTGTTCGAGGA
CGCGTTTCGACTTTGACTAGTTTCGAACTTGTAATATCCGTCGTTGGTCTGCACGAAGTT
GGGATTGTTGAGGGTGACGCTCCGCGGCAGAGAGCCATTCGTGATGATCTTGTTGTGCGG
CCTCTTCTCGGTCGGGGTTATGGGAACACCGGAGGAAATTTGCCGTTCGTATTCCGCGCA
CATATTCAGTATCTCCTCGAGACGAGCAGTCTCAGCCTCCTTCTGTTCTTCTTCTTTGAC
GCGTTCCTGGTAAGCCTTAATTCTCCGGTTTTCAGCTTCGAAGCTCCTGTCGTAGTGATT
GTTTGTGTACACCGGAGAATACTGCGGGTTCCTATCGAACGCCGGCGACGACAAACAAAC
AACTTTCCCTACGCTCCCGAACCTCTCATTGAACTCCATCTCACCATTGATCTTCCCGTA
ACCATCGCTCTGCTGGTAACCGTCCTCAAAGCCTTTAACAGTTTCGTGTAGTTTCATTTT
ATTTCTGATGGCAACATTCGTGTACGTCTTATCTGTCGCCTCGTCTTTCTTCATGTAGTT
TGGCAACATTTTGTCGCCTAAGACGTCTTTGGCTGGCGTGTTGACCGTTAACGAGTTGGC
GCTGAACACTTTTGGCGAGATCTCATTTTCGTTTGACGTGTAAAACTGGCTGCGTCCGAC
TTTCTGCTGTTTGGCGTAGTATTCGAACTTTGATACTTTGCTCTTGATGTTCGAAGGTTT
GGAACGTTCTTGATCCGAGTTCGAGTCATCTTGGTCCTTGAATAGCTTCTTGGGAACTGC
AGGGGGCTTTCTCTTCGATAGTTCTTTGAGTGTTAAATCTAGTTCTTGGTCCAATTGCGT
CAGCGAGACGTCTTTGTATACGTTCTGGTAGCGTTGCTCTGTGGTGCAATAGCCTGTGGT
GATACATTCCTCGTTGGGCTGGTATTGGATCGGGGGCATCGAAATATGTCCCGAAGGCAG
GACGGATTTCATCAGTTTCGCCTCAGCCGGGTGATTGAATCTGAGGTAGTTTGAGCGGCC
TATGGTCAGCATGCTGCCCTGAGATAGTCTCGTAGGCTTCTCCACGGGTAGACCATCCAG
TAGCGTGCTTCCACTGATTGGATACAATGTGACCACGCCGTGAGAGTTTTCCACGCGACA
GTGCACGCTCGCCACGCCTGTCCCCATGACGTAAATGTCGCATGTCGGATCAGAACCTAT
TGTCACGCGACCTTGCTTAATGGGATGTAGAGTGACAGCTGTGCTCAGTCTTCCAGTACC
GAGGCTCACCAGATGAGGAGTGTTTGTTGCTACCCTCAAAGCGCTTCCCTGCTCCCGAAC
GTCGACCCCATTGATGTTATCCTCGTTTCTCGTCTGTAGACCGGACATTTTCCGCGAATC
AGGACGAGGCGTGAAGACGCCAGCACCAATCGGATCACGTCGTGTCGGAACGGCGGCGTG
ACGTCATCGTTCTTCTTTATCTCGGATTTGAATTTCGAATTTACAAAGTAGTTGTAATTT
AAACACAAAAAAACATGTATGAAGATGACTAATATATCACACTATAAAATTAATGGTAAT
CACCGAAACCATATCACAGATTCGCACAACGCACACTGATTTTGTAATCAAAGTCAAATT
ATCAGTATAAGTAAAAAATTGCAATAAAAGTTTTCGGTTAAAAATTAAAACCTAAATAAC
ACAACACAACAACCGACACACAACTTCGAACTGACAAATGACAA
(6464 bp)

- SilkBase 1999-2023 -