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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64219_c0_seq2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		lariat_debranching_enzyme_[Danaus_plexippus]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008419 F RNA lariat debranching enzyme activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:18.83 TPM:32.83
ORF EntryO_BomoEE10423_complete:A_BomoEE_comp64219_c0_seq2
Sequence
(Nucleotide)
GTCATAAAATCCCTTAAAAAAAAATATACCAACATAACAACTGTTAGGTATTTCATGAAA
ATCAAATTAATAATATGTAATTGTTGAAATTCTACATTCATACATATATTGGTAAAAGTA
CACCAATTATGAGTAAGAGAAAAAATACTACTTCCAGTATACCTTCAAAAACACCAAAAC
ATTGGTCTTTAGGACTCATTGCATCGATGAAAGACCCTAATTCAATTATAAAAAATACAG
AAAAAGTTGTTGTTATAAAAGATAAGTATCCAAAAGCTAAAGTACATTACCTTGTATTAC
CTCATGAAGAAATCAATAGCATTTACAAATTAAATAAATCACACATCAGTTTACTTGAAG
AATTTGGTAACATCTTTAAAGAATTAAAGGAAGAAAATGAATCTGAACTTAGAGCTGGTT
TTCACGCAATACCTAGTATGCAGAGAATGCACATGCATGTTATTAGCACAGACATGATAT
CCACATCCCTCAAAACAAAAATACATTGGAATAGTTTCTGTACAAAGTTTTTTATTCCCT
ACGATGAATTACTTCAAGAACTAAAAGACATTGGTAACATAAGGAAGATTCCTTCAGAAT
TGCATACTTCACTAATGAAAACTCCACTGCAATGCAATCAATGTTCATTCAAACCAAAAA
ACATGCCTGAATTAAAAGATCATTTATTAAAACATCAACTTTTATAAGATCTTATTTATG
ATTTACAATAAAGTGATATTGCATAAAAAATTGCACCATTTTATTGCAAAGCACAGAGCA
TTGTATTGTGATATGTAACATAATCTTTACACACAAATAACATGTTTATTAGGGGTAAAT
TAAATAAAAATGAGCCATTATGACATTCATAAAATCCTAGATCTGTCAATTTTGCACTAA
CATTTATTCAATATTACCCCTAGGATATTTTGATGGACTGGTTGGACTTACTAAGGAACT
TGAGTTCATACTTTGACTCTCTTCTTCTGTGGAACTATAAATTGATATATTTCGCCTCTT
GAATGTTTTCTTCCCACTAATTGAAGTAGGAGTCGTACATTCAGAAGTATTACATAAACT
ATCTAATAATAAGGGATTTTCTGAAATAGGTGTTGTACATGTATTTTCTTCACAATCATT
TTCACTAGGTGTCACAGGTGCTGGTAAAATTAGTTTTGACATAGGTGTTTTTAGTACTGG
ATTGAGATCTGCTTTCGTTTCAACAATATCGACATCAGTTGGTTTCTCCATAACTCTGCC
TGCTCGTGCCATAATCACTTGTACAGGATCATCAATACCTAATTTCTCACATAAATCTAC
TGTCTGTGGATTTAGTATAGGGTCTGTGAGATATGCTTTGGGAGCTCCTGGCTTGTATGC
AGGTGCAGTTTTGACGAAATTTTCAGATGTAATAGCCAAATTTTGCAAGGACTGAATTAA
AATTTCTTTTTCTTCATTGGTTGGGGTAAAATTGTACCTTTCATTTCCGCCCGGTCCAGG
TAGATGACCCTCCATGTTTTTAACATTCAGCAGATGATTTGTATTCTTCAACACAACTAA
CCATTCTGCATCATGTTTCAAGCATTTATCTCCATCATACTCATGAGGTAGATCTAATAT
TTGTAAATGTCTACGTTTTGGCAAACATTTGTCCAGAGCAAGAAACTTCGTTTCCCTGTT
ATCTTCATGTTTGACCAATGCTGCAAATTGACAGTGCAAATGTGCTGCAAACCAGTAATC
TGGTTTCAATGTATGAAGTAATTTTTCTGCAGGCATACTACCTAATTGGTTTGATTCAAT
ATCTTCCCTTAAAAAAGGTTTTCTTCTCAACAAGTGATCTTTGTCTCCATAATCTGTAAT
ACCACGAGGCCAGTCATGTGTCAACATTACATGTAGTTTTTCTTTCAATTGAGATAATCT
AAAGACATCTAGTGACCTGATATGATACACAGACCTCATGGAGTTTTGGTTGTAGGGCAA
ACATTCCCAGAGGCCTTGCAGGTAATCATGCCCTTTGAATATTCCTGATAATCCACCAAT
CCTCAGTTCTCCAAACTTAACAACACCAGCACGTCCCATGTAGTATATATTGGGAGCCAC
CCACCCACCATACGGAAGCTCCTGTAGATAGTTTGAAGCTTCATGGTTTCCACCAATAAA
TAATGTTAATACAGGTGCCTTCTTCTCCCCACTGTAATATTTGTAAAATGTGCACATGCG
TTGATATTTCTCGGGTACAGCCATTGCACGTAAATCAGCGGCATTTCGTACAGATTGAAA
GTCACCGCAACATATTAACAAATCAATCTTAAAACCTTCTCTCTCTTGTAATGTTTCTAT
GCAATCGTAGATTTTGTCTAATTCTCCATGAGCGCATCCTTCCACTGCTATTTTCATGAT
TACCTAAAAGAGTTCACAATTAGTTTTCCTTAAATGCTATACGTAAATAGCAATAACGGT
ATATATATTCTGTTTTAATGTAAAGAAAACACTTGAATTGAAACTTTAGAACAGAATTGA
GAACGAGGCCCATTCAACTTAGTTCATACAAACTGTCATAAAATGTGAA
(2569 bp)

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