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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64162_c0_seq3
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_TIA1_cytotoxic_granule-associated_RNA_binding_protein_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007281 P germ cell development
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017145 P stem cell division
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:46.03 TPM:80.28
ORF EntryO_BomoEE10403_complete:A_BomoEE_comp64162_c0_seq3
Sequence
(Nucleotide)
TTAAAATTCAATATTGTAATGTTTCGTTTACTTAAATCATTTAATAATTATTAAATTATT
TGCACGTGTTCCTTTAATAAATTCTATTATTTTTTTTCATTAAAAAAGGTTGCATACACT
TGTTTAAAAAAATCTCCCGCCATCATTTCAAATTCATTCGACCGGAAATTCGTCTATAGA
TGCGTTTGTTTCCGAAAAGTGAACGTTTCACGAGTCAACAGCATCGTTTTTCGAGAAGTT
CTAAGCGCTGTTTGCGACATTTTTCTTTCATTTATTCGTTATCCAATGTTATAAGTGATG
AAATAACACGTTGTTAAGCGATTAATATTGATATTAGTGTTCATAGACGTTAAAAAAGTA
ATCGACAGATTACGATAAGCTAATATGGGCGACGAAAGCCACCCGAAAACTCTCTACGTC
GGTAATTTGGACCCGAGTGTCACAGAAGTTTTCCTATGTACGTTGTTTGGTCAAATAGGC
GATGTAAAAGGTTGCAAGATTATACGGGAGCCAGGAAATGACCCGTATGCATTTCTCGAG
TTTACGTGTCACACGGCGGCGGCCACAGCGCTGGCCGCCATGAACAAGCGAGTGGTCCTC
GACAAGGAAATGAAGGTTAATTGGGCGACGAGTCCTGGTAACCAGCCGAAGACGGACACT
AGTAATCATCATCACATATTCGTGGGCGATCTGTCTCCAGAAATCGAAACAAACATACTC
CGAGAGGCCTTCGCTCCATTTGGTGAGATATCGAACTGTCGCATAGTACGCGATCCTCAA
ACGCTCAAATCCAAGGGTTATGCTTTTGTATCATTTGTAAAGAAAGCAGATGCCGAAGCT
GCCATCCAGGCAATGAATGGCCAGTGGCTGGGATCAAGATCCATACGTACGAACTGGTCA
ACGCGTAAACCACCAGCGAAGGGTGTGAATGAAGGCGCGCCCAGTAGTAAGAGAGCAAAA
CAGCCAACATTTGACGAAGTTTATAATCAAAGCTCACCGACAAACACCACAGTTTACTGT
GGCGGTTTCACAAGCAACATTATTACTGAAGAGTTAATGCAGAACACATTCTCACAATTT
GGTCAGATACAGGACATCAGAGTTTTCAGAGATAAGGGCTATGCATTCATTAGGTTTACT
ACAAAGGAAGCTGCAGCACATGCCATAGAAGCTACACACAATACAGAAATAAGCGGTCAC
ACAGTCAAATGTTTCTGGGGGAAAGAGAATGGAGGTGCTGAAAACCAGAGCGGGAACAAC
TCGTCGGCGGCGCCTCCAGCGATGGGCGGCCAGTCCCAATATCCTTACCCGTATCAGCAA
GGAATGGGCTATTGGTATGCTCAGGGTTACCCTGCGTTACAGGGCTACATGGCTCCCGGG
TACTACCAGCAGTACGCGGCCGCGTACAGCAACCCTCAGGCCGCCGCGGCAGCGGGGTAC
CGCATGGGAATGGGCGGTAATGGCGGCGGCGGCGCCGGGTGGGGCGGCCCCTCGCAACCC
CTCATGTACGCGTCGGCCGCCATGCCCTCCGCGCAGTACCCCTCCCAGTAGCAAGGCCGC
ACTCCCCCGCCCCCCGCACCACCGCCCCTCGTCGCCCCGCACACCGAGCCACCCCTCTGT
CGGTCACAGAGGGACAGACTATGACGACGCGCGGCGCCGCCGTGACGTCACACCGAACGT
TATGAGAACATACAGCAATACCTCTAAGACTGTCTTACTAATGTATCTAATGTATAATGA
AAGATGATATTTTCTATAAAGCTAGTCAGTTAATTTCTTCTATCTGAACTGATATTGCAG
TGGAATTTGTATTCGATGACGTCAGCGAGCCAGTCTGTTTCGCAAGGGGACTGTAAACGA
ATATCCGTGAGTTAGACACCGCTAGAAGTCGATTTGTGAAACGCAGTCTCTGCGAGCGAC
GCCGCGCCTCCGCGAGAGGGCGCCGGCTGCGGCGGCGAGACCTTCATAGATAGGACATAA
CGAAATAAATTATAATTTTTTAAAGAGGTTATTATGAGGGGATCTGTCGCGTGTGTGGAC
TCCTGTACATAAGGTTGATATTTATTGCGGCCGGCGGACGCGCCGCAACCCTGGACTCTG
CTCACCAGACCGATACACATATTTATATTAAGTTCACCGTAAGTTGTTTTGTTTGACCTG
AATTGTTATGATTTATTGTAATGGCAAACTGATATGTCAATAAAGAAGTGGGTCTGGGAA
TGGATGTTTGATTTGTCGTATAGACTATAATAATAATAATAATTATAATATGAAACTGTA
TTATGTTTTGGGTCCAAATTTTATAGATAAAGAGCGATCCGGGTCCTTTGTGATTTAAAT
CCACGTAGATAGTGGCGATCGAATGGAGAAAAATTGTAAATTCTTTTATTCTAAAAGGTC
ATTTTGTAAAAGGAGAAATAAATAATTTAAGTTACATATTTTTGATTGTTGTTTGTATTA
TTGATAAAATTTTGATCCCTCAAAAACATAATCCCGAAGACGATCGTCTGAAAATAATCG
GTTTTTGCATTTCAAGTGCCCATTGGGATCTCTTATTTGTAAATTATATACCGACTCAGT
TGATTTATAAATTGATTAGATGAGATTTGTGTCTCGAGAGAGACGACATTCATATTCACG
GCATATGTGGTCCACCTGGTGTCAAGTGGTTACTGGAGCCCATAGA
(2686 bp)

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