SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64121_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		Karyopherin_beta_3_[Danaus_plexippus]
Ontology
GO:0000059 P obsolete protein import into nucleus, docking
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0005095 F GTPase inhibitor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006610 P ribosomal protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008139 F nuclear localization sequence binding
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0031965 C nuclear membrane
GO:0034260 P negative regulation of GTPase activity
GO:0034399 C nuclear periphery
GO:0042307 P positive regulation of protein import into nucleus
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0071230 P cellular response to amino acid stimulus
Transcript
Level		FPKM:237.89 TPM:414.90
ORF EntryO_BomoEE10365_complete:A_BomoEE_comp64121_c0_seq1
Sequence
(Nucleotide)
CCGGACCTCTCTGTCAGCGAGTGAAATAAATCTCAAAATAGTTGAGAAATTAAGTAGGTA
CATAATATTTCCAACTTTTTAAGTTCATTTAGTCGATGTTTTCATTGTTTTCTTAACTGG
CAACAAAAAAGAAAGTGGCCAGTAGTATGGCATGTTGGTTGGATGAAAAAAATTGTTCCT
TTTGAAGAAGTTCAACATGGCAGGAGATCAGGCGCAATTTTATCAGTTGCTAAATACTTT
ACTTTCAACCGATAATGATATCAGATCCCAAGCAGAGGACGCATACAACAACATTCCAAC
AGAAACAAAAGTAGTGCACCTAGTGAATTCAATTCAAAATGCAGACATTGCCGAAGATGT
GCGTCAAACGGCGGCCGTGCTGTTACGAAGATTATTTAGTGCAGAATTCTTTGAGTTCTT
CCCGAAATTGCCATTTGAGCAGCAGACAGTGCTCAGAGAACAATTGTTACTCACCCTTCA
AATGGATCTTTCCCAGTACTTACGAAGAAAGGTTTGTGATGTAGTCTCTGAACTGGCTAG
GAATCATATTGATGACGATGGCAACAACCAGTGGCCTGAGTTCCTACAGTTCATGTTTAC
CTGTGCCAGTGCGCAAGATCCAAACATCAAAGAAGCTGGTATTAGAATGTTTACATCTGT
ACCAGGTGTATTTGGAAATCGTCAGACTGAAAACTTGGATGTGATAAAAGGCATGTTAAT
ATCTGCTTTGCAGCCAAATGAATCAATGGCTTTGCGAACTCAGGCAGTTAAAGCTGTAGG
CGCCTTTATACTACTACACGATAAGGAGCCCATCATACAAAAGCATTTCAGTGATGTTCT
TCTACCTTTGATGCAGGTAATAGTTCTGTCTATTGAAGCAGCTGATGATGACTCTGCATT
GAAAGTACTCATTGAGTTAGCAGAATCAACACCTAAATTTCTCCGACCCCAGCTGGAGAC
CATATTCCAAGTTTGCATAAAGGTGGTTGGGGACAAAGATGCTGAAGATAACTGGCGCCA
ACTGGCACTTGAAGCGATGGTAACATTATGTGAGACAGCACCAGCCATGGTGCGTAAACA
AGTGCCCAATGCCGTGAGCATGCTCACTCCACTTGTACTTGAGATGATGTGTGAGCTTGA
TGAAGAGCCTGACTGGACCATACAGGACAACACTGCTGATGACGATAATGACCAGAATTA
TGTGGCAGCAGAATCAGCATTGGACCGCATGTGCTGTGGTCTTGGTGGCAAGATAATGCT
GGGACTTATTGTGGGACAAGTACCTGTAATGTTGCAATCTGAAGATTGGAAGAGACGCCA
TGCTGCCTTGATGGCTGTCTCCTCAGCTGGTGAAGGGTGTCATAAACAGATGGAACAGAT
GCTCGACCAAGTTGTTACTGCTGTTCTTAATTACCTGAGTGACCCTCATCCCCGAGTACG
TTATGCAGCTTGCAATGCAGTAGGGCAAATGTCAACTGATTTTGCACCAGTGTTTGAAAA
AAAATTCCACAGCAAAGTTGTACCTGGACTTCTGATGGTGCTCGATGATAATGCTAACCC
GCGTGTACAGGCTCATGCAGCAGCTGCTTTAGTAAACTTCAGTGAAGACTGTCCCAAACC
TATCTTGACTCTGTATCTTGACCCATTAATGAAAAAGCTAGAGGCCGTCCTAACTACAAA
ATTTAAAGAGTTGGTTGAATGTGGTACAAAACTGGTACTCGAACAGATTGTGACAACAAT
CGCCTCAGTTGCAGACACTGTTGAGAAAGACTTTGTCAAATATTATGACAGACTCATGCC
CTGTCTGAAGTATATAATTGCCAATGCTACTACTGATCAACTTAAGATGCTGCGTGGCAA
GACAATAGAGTGTGTCAGTTTGATTGGACTAGCTGTTGGAGAAGAGAAATTCATGTCTGA
TGCATCTGAAGTGATGGATTTACTTCTTAAGACCCACACAGAAGGTGAACAGTTGCCTGC
TGATGATCCTCAGACATCATATCTTATCTCAGCTTGGTCTAGAATTTGCAGAATAATGGG
CAAGAAATTCTCACAATATTTACCGATGGTTATGGAGCCGGTAATGCGTACAGCAGCAAT
GAAGCCAGAAGTAGCACTTCTTGATAATGAAGATTTAGAAACCATTGAAGGAGACCTTGA
TTGGCATTTTGTCACACTAGGCGAACAACAAAACTTCGGCATTAAAACTGCTGGACTTGA
AGACAAAGCTTCTGCTTGTGACATGTTAGTTTGCTATGCTCGAGAACTAAAGGAAGCATT
TGCTGAATATGCTGAAGACGTTGTAAAGCTAATGGTGCCCATGTTGAAGTTTTATTTTCA
CGATAATGTGAGAACTGCTGCAGCAGAATCCCTGCCTTATCTCCTTGAATGCGCCCGCAT
TCGCGGCCCGCAGTATATTCAAGGAATGTGGGCTTACATAGTTCCTGAACTGCTTAAAGC
CATTGACTCTGAGCCCGAACAAGAAGTGCAAGTTGAACTGCTCAACAGCTTAGCCAAATG
TATCGAACTTTTGGGCATGGGTTGCCTTTCTAACAATGAGATGATGGCAGAAGTCTTGCG
TATTCTCAACAAACTATTAACTGAACATTTCGAACGGGCTACTGAAAGGCGACAAAAGCG
TGCCGACGAAGATTATGATGAGGTCTTAGAAGAACAATTAGCTGATGAAGATAATGAGGA
TGTGTACAGTTTGTCTCGCGTAGCAGATGTATTACATGCGCTCATGTCTGCTTACCGCGA
TTCGTTCTATCCTCATTTCGACACGTTGTTGCCCCATCTTGTGCAGCTACTTGCGCCTAA
TAGGCCTTATTCTGATCGCCAGTGGGCCATTTGTATTTTTGATGACATAATAGAATTCGG
AGGTCCTGCTTGTGTGAAGTATCAAGATATATTCCTGGAGCCAATGTTGAATGCATTACG
TGAATCTGAACCGGAAGTGCGTCAAGCCGCGGCCTACGGTTGCGGCGTGCTAGCACAGTT
TGGTGACGTACAGTTTGCAGCCGCCTGCGCACGAGCTGTACCTCTTTTGGCCGCCATTGT
CGCAGAGCCGGACGCACGCTCTCTTGAAAAGATCAATGCAACTGAAAATGCTATATCTGC
CGTCGCTAAAATTATCAAATACAATCATTCGCAAATAAATAGGGATGAAATCATCACGCA
TTGGCTGACATGGTTACCGGTGACTGAAGATACCGAAGAAGCGCCTCACGTGTACGCCTT
ATTATGCGAGCTCGCGAGCAGCGGACACGGCGCTTTATCGACACCTGATGCCCCGCAACG
TGTGCTGGCCACACTCGCCGAAGCGTTTCGCGCCGACGCTGTACCAAACGATAACCCTGT
CTATGCGCAAATGGTTGCATTACTTCGACAGATACAGTCAAATGCCGAATTATTTAATTC
ATGTCTCATGACTTTAAGTAACGACCACAAGGAAGCTCTTCAGATAGCTCTGTCCACATA
GTAACGACGCCCTATCGACGCCCTGCACCTTATTCTGGCTACTCCCGCTACTTATAAATT
ATTGCACGTTATTTTAATGGCATAACATGTATTTATTGTGAAAGCTCAAGGAGCTGATGA
CTGTTCATGGAATTATTGTTATAATTATAAAATTGTCAATACATCACTCCATTTGTTAAT
TGTTTTCTTTCGAGAAGAATAATAATAGTTTTCATATAAGTGCTTATATTGGGCTGATTC
GAATTGCTGTGATATACCTTACCGGTTTATGCCTGGTGAAATGGTGCGATTGCATTTCTC
CATATTTACGGTCATGTCAACAGTTCCGTGATTGTACATATTAGAAGTTCGAAATGACGA
AAGATGGCCTGATTTGACAAAATCGAAACTGATAACGCACTACGTTATGTAGTATGTTAT
GCTGCTTTGTTAATATCTACATTATTGCTTGGAGTGTGTACATACTATTTTGGTTATAAT
TTATTGAAGTCTTAATACAATAATATGCAGCGTTGCATTATAATCTCACTGTTGAAAATA
AACAAACTGTTAGTTGTAAATTGGGCTGTCTACCTACATTTGATAAAATTACTACACGGA
GAACTAGGTGGTCATTTCAGCAAAACTTCGTGTTTATTAAGAAGTAATTTTATTCAATTA
TATATGTATTGTATACACATATTTGTTTAAACAAAAAATAAAAATATTGACATTAAAAAA
AAAAAAAAA
(4209 bp)

- SilkBase 1999-2023 -