SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64082_c0_seq2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_protein_PTCD3_homolog,_mitochondrial_[Amyelois_transitella]
Ontology
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0006417 P regulation of translation
GO:0008150 P biological_process
GO:0019843 F rRNA binding
GO:0032543 P mitochondrial translation
GO:0043024 F ribosomal small subunit binding
Transcript
Level		FPKM:12.49 TPM:21.78
ORF EntryO_BomoEE10298_complete:A_BomoEE_comp64082_c0_seq2
Sequence
(Nucleotide)
GGAAAAATGGAACTGCTACATATTGTAGACTTTTCGCATTGTTGATTGTTTTTAATTTCT
TAGAATAGTGCTTTATTATTAATAATTCATGATTTCTATTTTCATTTTAAATTATCTTTA
CTGAACCAGTAAACTTTCAATAGTAAGATGTATTCCAATATAGTAATTACGAGACAGATT
TCAAAAATTAAATGTTTATGTCGATCCTTGGTAAGTATCGAAAGTCAGAAAACTCCACAA
AGTGGTGCCTCTAGTGATGGTATATCACCGCCTGTTCGCATACAAAGAGGGCCAACTGAT
ATACTTCAAGCTTTGTCCACCACTGTTGGAATTGATCCTACAGCTGCACATTACAAGTAC
CATGATGATCCATATTTAATACCATTATCAAATTATCGTAAGAGAGCTTATGCACTGGCA
GCTGAAGCTGGTCGAAAAGCAGCAATATGGATTAGAGATGAACATGCAGACTTGTTTACA
ACAAGAATCTGGGATCCTCCGCTAAGGAAAAAAACACCTTACTATAATGCTGATCCGAAA
ATTGAAGCTTTCTCGCCCAAACCGATTTATAATGACGAAAGCAAGGTAACTGAAGAAGAT
CTAATATATACAATCCAAAATGCTCTCATTGAAGACTCAATTAAAGTATATCAGTTACTT
GGCGGGAGTCAAGGAGTGAGTGATGAACTGAAACTGCAATTGTTGCAACTTCTGTGTTTC
TATAATGAAAAGGAGCCTGATTCTGTGGAATGGTTAGAGGAGAGATGGTTTTCGGCAAAC
ACTAGAGAACGACAAGCAGCTACTTGGAGATTGGGAAGTTTGGCAGATACAATTTTTACA
TCAATGGAACCAAAAAGTCCAGAAGCATACTGTGCAATCATACAAGGAATGGCAAAATAC
TATCAGGCAGAAAGAGCTTATGAACTATCTCAGGAAGCAATTGAAAAAGGCATACCATTG
TCGACTGGGGTATACAATGCTTTACTAGGATGTATAGGGTTCTTGAGAGAAGGTGCTACC
TTACGGATAGAAGCCCTAAAATCGACACTAATGCAAATGAACGAACAGGGTCTCTCGCCA
AATATTGAGACATTGAGTGCTTGTCTCCGTTCTATATCTGTGTGGGGTGGCGGCATACAA
TTACAAAATTTGGCAATGCAATTAGTTGCTGAATTTAGAGAGCTTGGCATCCAACCTGGA
CTCTCTGCTTATTATTATTTACTCTGCTTGTTCTGTAAAGAAAGAGGGCCCCGTAATAAT
ATTCTATCGAAGATCCTCACTGATTTGGAGAGCAGAGAACGTTTAGAAGTGAATGAACCA
ACAGACACGAATTTCTTTATTACTGCAATGGGCGTGTGCAGTGACCATTTACAGGATATA
AACATGGCAGAAAGAGTCCACGCTCTGCTTATGAAGAACAATAACTATAAATTGGTAGGC
GACGCCTACAAGGAGAGCATATACTACAGACATCTAGTAACTGTTGCTTGCAGGCATGCA
CCATTCGAGAAAGCAACCGAATATTTAGACACGCTAATACCAAATATTTATATACCGGAA
CCATCGGTAATGGAAGAGATCATAAGAACCTTAGAAGTGGCAGGCGCGGGCGACCGACTG
GCACAGGCGTGGTCCCAGATCATAGTGTTCGGACACGCGAAACGAACCAAACTCGTTGAA
AGGCTGCTCTCAGCTTTATGTAATTGTTACGAGTATCAGGAGGAAGATGTAAAAGAGAAA
ATACGATCAGCGGCTGAAAGTATATTGAAACATGGAGAGACTTTAGAACAAAGAGATGAA
TCCAGAGACCAGAGATCACCGGTCTCACAAAAGTTATCGGCGACAGCGCTTTCGAACATC
ATCGAGCTATTGTCCGACGTGTCAGATAAATCTTCCGAACGCTGGACCAGTGTTGAAACT
GCACTCAATAAATTAAAACAGGAGCAAGCCACCGGAGTTCCATCTAAGCCAGAATCTATA
TCAACCTTAGCCGAGAAGGCTGCCTCTATGGGAAAACTAGAAATAGCTGCTACGGCCGTA
GCTTACCTGGCGGAGTGCGGGTTCGAGGAGGCGGCGGGTGCGAGCGCGCGCGTGCTGGGC
GCGATGCTGAACCGTCCCGAGGAGGAGGTGCGCGCGCTGCTGCAGGAGCCGGCGGGCGCG
CTGGCGGGCTCGCTGCACCCCGCCGCGCTCGCTGTACTCCACTCTTACCACTTAGCCAAG
ACTGGAACTGCAATACGCGATTCAGAATCGTCGACCAGTTCGGAAAGTGATTCCGAATCG
TCATCCGACGAAGACTAGACTATTTTAGGATTATTGTAATCACTAGATCGCTTCATTAAA
TGCATTTAGGTACGTAATATTGTGTTTTAATACTTTCATTAGTTTTAGAATTTTATTTAG
ATGTTATATGTGCCCCGTGACTTTCGCCTCCGTTTCCTTGCGCCGATAATCCTCAATGCC
GAGGGTCGCGGCCTTCCTTGATAACTTTCTCCAGGACTATCCTCGGCTGAGCGGATGGCA
TCGTGGACTAATATGTTGAGGATCTAGCGTATAGAGGACTTCTGCCTCTGGGCCTTCTCC
AAAAAACTCTAAACTCCCCCGCACGCATATAAGTACTGAGCGGCATCAGAATCTTGAGTT
CGGCAAAAATAGATTCGTTGGTTCTGTGTTCGGTCCAATAAATCCCAAGTATCCCGGGGA
CTTGACCCGCGAATTATTGGCAACACCTATTCACGATAAAAAAAAGGTGTGAATCTGCGC
GGGTGGATACCACCACCCTGCCTATTTCTACTGTGGAGTACCATTTTATTAAGGCTTGAA
AAGTATGGAAGCCATTTAACTGAAAACTGAGAATTCGTATTCATGTCTCAAAGTGCGTGA
CCTTTAGCTCTTCCACCCATATAAGTAATAAAATAAACAACTAGAATGAAAATACTCACA
GCTGACACCGACAGCTTAGTGTTATTAATCTTCTAATGTTTATAATAATGATGATGCTAT
AATGAAATCCCACAGACCCTGGATCACACCTATCTCCCGCAGCCATTATCATCACTGGAT
GTCTCGTCAAAGTGTGATTACGACAAAATATTCTTCGACTTCACCTTTGGCGGAGACGAC
ACCCAGTACATCTCCATCACAAACTCTGAGGATGTTAAGAGTGAGCATTATGACATGGTT
ACCGCTGTCAGAGACAATATCAATCTTCAAATCGAAGATCATATTCTGGAAGTTCCTGAA
TTCGTGTTGGGGGGACCAGTGTCGGATGTGATGTCACATATCGTTGTGGGAACTGACGAG
TTGACAACAGTCGATGAGTATGAAAATAATATAAAAACTGATGGAATACCGCATTTGACA
ATGAGTCCCCTAACGACAACACAAGAAGACACCATCGTGGTCCAAAGGCCGAAAATCGAG
AGAGTCGATATAACGCATGCGGGCTATAAAATCGAATACATGTCCGAGAGTCAGATGCTG
GCTTACAGAGAGGAACTCAAGGACAAGGTCAGCTACGCCAGCTCCGTGTACAAGTGCGAG
CTGTGCGTCCTGGGCTTCTACTGCCAGCAGCTCATCAAGGATCACTTCGTGTCCTGCCAC
CGCGCCAAGCCGGGCACCCTGGCGTGCCGGATATGCTACGTGTACGTGGAGGAGTCGAAG
CTGACCTCGCACGTGGACTCGCACTACATGAAGCACGTGTGCAACCTGTGCGGCCACGTG
GAGCAGAGCCGCGGCATCATGATGATCCACGTGGCCGGCCACGCCGAGACCAGGGTGCCC
AGCAACGTCATCAGGATCGGGGACCTGGGGCCCTTCGGCAGCAAGGGTAGGAAGAAAAAG
CAGGAAGCGACGAAGAAGGCAGCGCCGCCCGCCAAACCCGGAGATCTGCGGAGGCTGCTG
TCCAAGACCACCATAGAGGGATACAAGTGCTTGGAATGCGACATGTTCTTTAAGAGCACC
CGGGCTCGCAAGACCCACGTCGCGAGGTACCACCGGGAGGGCCTCCAGTGTGACCACTGC
AAGAAGACCTTCGTGAACAAATCCACATTGGTCACCCATCTCAAGTTGCACGACGGTCCG
TTACCGCGGGACGAGTGCCCGATATGCCACAAGATGGTGAGGTCCACGCAACTGAAGTAC
CACGTCCAGAGGCACAAGAGCAAGAGCCGGTACGAGTGCGAGGAGTGCAACAAGGTGTTC
TCCCACCTCGCGACCTACCAGGCGCACCTCAAGTACGCCAGGGCGCACGCCACCGAGCAA
GTCCTCAAGTACCCTTGCCCGATGTGCAACAAGGGCTACCCGACGAAGGAAGCGATGCAG
GACCACTTCAACTACCAGCACCTGGGGAAGACGGCGCACAAGTGTCCCGTGTGCGAAAAG
CCCATAGCCTCCAGGGCGAATGTTGTGAAGCACGTGATGAGGGTGCACGGCGAGAAGAAG
GAGAAGCCGAGGAACCACGCCTGCGGGATGTGCAGGAAACGGTTCACTGACAAGAAGGCT
CTGACTCAGCACGAGGTGATCCACTCCCGGGAGAGGCCGCTGACCTGCGACATCTGCCAA
CAAACCTTCAAGCAGAAGGCCTCTCTTTACACGCACAAGAAGAGGGTCCACAAAGTCGTG
CCCAACAAGAAAGTCGTTGAATTCATTGAGGCGACGGCTTAGAGATGTCCCGGGACTGCA
CCGCGCTTGGGGTCTTCGCGAGGAAGCGTCGGCCCCATCAGGCAGGAGTGGTGTTGCACG
AGCGTATGACGTGCCTTATCAATGAAGAAGTCTTCAGCGAAGGGCTCCTGAGAGCGCATA
TGGCGGTAACGAATTTGGGACTGCAAGCCCCTGGTTAGGGGTGTGTCGGGTACCACATAT
ATTGGTGATTGGAGACCCATATAGGAACTCTGGGGGCTATAGTGATTATTGTGAAGGAAT
TCGGTAGGCAGCGGCTTGGC
(4940 bp)

- SilkBase 1999-2023 -