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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64064_c0_seq2
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		ap_endonuclease_[Danaus_plexippus]
Ontology
GO:0003677 F DNA binding
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:87.32 TPM:152.30
ORF EntryO_BomoEE10277_complete:A_BomoEE_comp64064_c0_seq2
Sequence
(Nucleotide)
GTCTTTTTTGTGCTACCTGGAGGCCCCTTGCTACTTTATTATTTGACTAGGTACCATGGT
ACCGTTCTATCTATGACATTTGACAACTCAAACCTTACAGTGCAATGTTTGACAGCAAAA
ATTGGCGGCAGGGGTGATCTGTCATTTTACCGGAAATTTCGCCCGCCACCATTGGTGTTT
AACGCGTTTTTTTATTTTTGAATTCCAATTATCTTCTAGTAATAAGACTGTTACAGTAAT
AACGAAGACAAATATATCTTCTTAGATCATGGCACCAAGATCAGCAAAAGCTAAGAAAGC
AGCAGAAGCAAAAGTAGCAGACAATGATGCACCTAAAAAAGGAAGAGGCAAAGCAAAAGT
AGTTGAAGATCCTGAAACGGAGTCTGTAGAAGCTGAAGTTGATGAAAAGAACATTGTATC
TGAAAAGAAAACCAAACGCGGAAGGAAAGCTGCCGGTGACACAAATGGACAAGATGAGAA
TGGTAAAATAGAGGAAACAGCACCAAAAAAAGGAAGGAAGAAGAATGTAGAGGAACCTCC
GGTGGAAAATAAATCTACTGATGAACCCTCAGTTGAAGATGAAGTGGCAGTGTCTGAGGA
AAATAATCCTAGTGAAGATGGTTCAGAAACAAATGGTCACATAGAAGAAGAACAAGTTCC
TTCAGGTAGGGGACGTAAGAAACAAACCAAAAAGGAAGTTAAAAAACCAGAGCCTAGAAC
AGGCAGAGGTAGGAAACCTAAACAAGAAATAGAAGATGAAGTTGAAGACAAACCAAAAGG
TAGGGGCAGAGGACGCAAAGCCAAAGCTGAAGAAGCTGAGTCTGATATATCTGAAACTGT
TGAGGATGAAGGAAAGCCAGAAGCTGCTAAAGGCAAGAAGAAAGTTCAGAACCAAGCTGT
TGAGAAGCCTGCAGAGAATGATGATGATGAAGTAGAAGAGGAAAATGTAGAGGAACCAAA
AAAGAAGGAAACCAAAAGTCGCAAAAATCAGGGCAAAAAAGTAGCAGCCAAAGAAGAGAC
TGATGATGCTGTGAGGGAAGATGAACCAGCTTCTAAGAAAAGGAAGGTCACAAAAAAAGA
TGAAAAACAAAAAGCTGCACAAAATGAAGACGATAATGTTGATGAAGAGGAAAAACCTGA
ACCAAAGCCTGCAAAAGGAAGGCGGGGTCAAAAGAAGGCAGAAGTATCTGCTGAATCCCA
TGAGGAGCCACAGGACACTGGTGAGCCAACTACAAAACGTCGACGCAAGCCTGTCGAAGA
AAAGGTGAACACCGAAGACGCGAAAAAGAAAGCACCGCCCAAGAATAAATCCACGACAAA
TTACGAAGATATTGACTTTACAAATGAATCGAAGACGACGCAAGGCAAAGAATGGAACTT
CAAGATAGCGAGTTGGAACGTTGACGGGATCAGAGCGTGGATGAGCAAAGGAGGCTTGGA
TTACATCAAATACGAGAAGCCGGACATTTTCTGTTTGCAAGAGACGAAATGTGCAACGGA
CAAATTGCCAGACGAAGTGGCTAATGTTCCAGGCTATCATGCGTACTGGTTGGCCGGGGA
CAAAGATGGCTACGCAGGCGTAGGCATTTACACGACAAAGCTAGCGATGAATGTCAAATA
TGGCTTGCAAAATGAAGAGCTGGACGATGAAGGTCGCATTATAACGGCGGAGTACGAACA
GTTTTACTTGATTTGTACGTACGTACCGAACGCGGGCCGGAAACTAGTCACAATGCCCAA
AAGGCTGCGATGGAACGAGGAATTCCTCAAACACGTCAAAGAATTAGATAAGAAGAAACC
TGTGATAATATGCGGCGACATGAACGTTTCCCATAAGGAAATCGATTTAGCGAATCCGAA
GACGAACAGAAAGAATGCCGGCTTCACGGACGAGGAGCGCGCCGGCATGACGCAGCTGCT
CGGCGACGGGTTCGTCGACACCTTCCGACATTTCCACCCCGACCAGACGGGCTCGTACAC
TTTCTGGACGTACATGATGAATTCCCGTTCGAAGAACGTCGGATGGCGTTTGGATTACTT
CATAGTTTCCGACAGACTGATTCCGTCGGTCTGCGACAACGTCATCCGCGACAAGGTGTA
TGGCAGCGACCACTGTCCGATAGCGCTCTTTCTAAATCTAACAACAGCCGAGAAACCGAA
GGAATAAAGTCCTTGTGTACTTTGTCCCGATGCCGAACTGCCCACCAGCCCGACCCGCCC
AACTGCTCCCGACACTCATACGAGTTATAAATATTGGCAAAAACTTGTGTCTAATCAAAA
ATTTTACTATAATATATTAAGTGTTGCTTGTAAAAAAAACCCAGGAAATTCATTAATTTT
CAATGCTTAATCGATTTGATTGCTGCAGATAGGCAAGACGCCCCCAATTAGTGTTAGACC
CACAATATGAGATGTGGTTATGCCGCCGCGAACCTTGAATCTTGAACCGTTGAAGACATT
GTAGGTTATAATAACGGTTGTCTATTCTTTAAACCGAAAAAGCGGATTGGTGCAGGTGTG
CTTAAAAATTTCGAAAAATGTTAAAAACATTAAGCCACGGCAGCTCGTGATTTGTAATCT
TATATTTCAATTTGAAAAAAAAAGACAAATGATTCTGTGATTTTACGTTTCTTTGGTAAA
TTGCGAAAATATGGACTGATACATTTTGTTTCGTAACAAAATAAAATTTTGTAGCTCAAT
ACATGTGTTGTTATTTTTGATTGTAGGAAAAATATCTAATAAGCTTTAAATTATTATCAC
TTTCCTTGTCCATTTGAAATAACCAGCCTAAATAATGTTACTGTTCAAACTTTGGTTCAT
TAGACTGCAGACGCCACATCGGTTGGTCTTTAAAAATAAATTGCGAGCAAAAACAGTAAA
TAAATGTTATTTTTTTATGTGTTTTCGTGTCAGAAGTTATTTCTAGCATGTCTCTAACAT
CGATGTTATTCGATCCTGTTAATTGAGTATATTTATTATAATTTTTTTATCGTCTATTTG
GTCGAGTGGTTAGCGGTTGACAATTACTGCATTACGCGATCTGGGATTTTCGGTCAATCT
TAGTAAATAATATTAGAGGTCTGTGTTGGGTTAGTACTTCTGCGTCTCTTAAACGAAAGA
AAACATTGCTATGTAAACAATGTATCCATTGAATGTGGATAGTCTATTTCTTTGTTTGCG
TAGGTGACCTGAAGAGCTCTTATCCAACCTGATTTTAAGTTTGATGCCAAGATTCGAGGT
TTTTTTTTTAATTTATTGCTTAGATGGATGGACG
(3274 bp)

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