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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64052_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_vacuolar_protein_sorting-associated_protein_18_homolog_[Bombyx_mori]
Ontology
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0007032 P endosome organization
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007634 P optokinetic behavior
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0015721 P bile acid and bile salt transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030674 F protein-macromolecule adaptor activity
GO:0030897 C HOPS complex
GO:0031902 C late endosome membrane
GO:0035542 P regulation of SNARE complex assembly
GO:0043485 P endosome to pigment granule transport
GO:0045176 P apical protein localization
GO:0046872 F metal ion binding
GO:0048069 P eye pigmentation
GO:0048757 P pigment granule maturation
GO:0060036 P notochord cell vacuolation
Transcript
Level		FPKM:11.55 TPM:20.14
ORF EntryO_BomoEE10248_complete:A_BomoEE_comp64052_c0_seq1
Sequence
(Nucleotide)
GGTACCCACCCGCGCGGACTCACAGGTCCTACCAGTTTGCGTCGTACAAACACCTCAATC
GGAAAATTTCACTACTCCCATTCCTTCATGACTCGGTCCCAGTCCTCGTCTGATATGAAC
GGTTTATCGATGCAACTGATCATGTGCTCTCCGCAGTAGATGCATTCGTTCGCCACGATG
TCGTCTATTTCGTTCTTCAAGACTTCCCTGAGGGGCAGGCCGCTCGACGTGGCGGTGGAC
AGCTCGATGTTGGACAGCACGGACAGCTGCCGCTGCAGGTCGCCCAGCTTGCTGCGCTTT
GCTGCACCAAGCATCGGCGTGATCTCGGCAGTGAGGCAGTCCGCGTGGAAGTGGTGTCCG
CAGGGGAAGAGGTAGAAGGGCCGCAGCAGCAGCGCGAGGTCGCAGGCGCAGCACCCGGAC
GAGGCCGACACGCGCACACTGCGACCGCGGAACGAGTGGATCTCATCGCGAACGTATTTA
GCGGCCTTCGTAGCTTCTTCCATTTCAGCTTTTGTCTCCTCAATTTGATTGTTGTACTCC
TGTAAAGATTGACAAATAGGTTCCCTAAAATGATCTATGGTGACCACGTCGCTGAAGAAC
GGCAGGATATCTTCGATCTTGATCAGAGGACACTCCTCGAGGAAACTCATAGCTTCCTTG
ATGTCTTGGTTCTTGGTGATCACGTGTTCAGCGATGTGCAGCCACAGCTGGCGCTGCACG
TGCGGGCAGTCGGGCAGCGCGGCGACGCTCTTGGCGAGCGCGAGCCGCACGCGCAGCGCC
AGCTCCACGGCGCCTTCCCACAGCCCCAGCAGCGCCGACAGCTTCACGCACGCCTCAGAC
GCGTTCTTCTCGCGACAAAGCCTCAGCGCGTAATGAACATCGTAGTTGACCAGCGCGATG
TCCTGCCCTTGCCGCGACAGGTACCTCATCAGCGCCTGCTGATCATGCTCCGCGTACAGC
GTCAGCAAGTAGTTGTGAATCGCCTTGTCCTTCACGTTGAAGTGCACCACAATGAACTCC
AAGTATCTGGTGATCTCCGTGATGTGCGCCTCGTCGTTCTGACAGGACAGGAACGCCGGC
AACAGCTTCGAGGGACTCAGCCTGGCGCCTTGAGCGATCAGAGCGTTCACCATGTGCTTG
GGAGCCGCCTCCATCAGCACCGGAGCGAACTGGTAGAACAGGTCCGGGCGCTTCAAGTTC
TGCAGCGCGTTTATAGCTTCTAGATAATTCTTCCTGTACACGTACTGGGACACGACGTTT
TCAAAATCCTCGTTGATCATCGTCAGTTTCAGTAGATTCTGTTTGTCGCCGTGCGAGGAC
ATCAGCTCGTATATGACGGATTTAACGTGACGCATCGTCTTCGATACCTTCGGATGGAGC
AGGAACACTTCGAAGTCGCTCTGCATCTGATGGTATTCCGAGCTGTCGCCCCTGCCCGTC
CGCCGCAGCGTGCCCAGTTGCGACAGATACAACTCCGTCATCCAGATAACGATCATCGAG
ATCAACGTCTTATCGTCATCTGTCAACGACTCCAGTCGCCTTTCCAAGTATTTCTTTAAG
GCATCAAATTGCTCGGCTTCCAAAAACTTAAGACATATCGTCTCAAAGCTTCTCTGGGTT
TCGGCATATATTTCGGCACTTCTCTCGTATTCGCCTTTCGAGAAGAACAGATCGGCTTGT
TTCATGTTCACGATATCCAGGAAGGCCGGATTGTTCTGACAATATTCTCTAGCCAGATCG
AACTGTTCTTTATCTGAATATATCTGCCATAGGTTCCGTTCTTCACGAACGATCTTGTAG
CGAAATATCTTTTTTTCCGTAAACACCCAAATCTGTCTTTTCTTCAAGTCGCGTATTATT
GTTTTGAGTTTCCCATGAGCTTCCGAGTAAATATCCTCGTGGACAAGTTCTTGATTGAGT
AGAGATACTACTTTAACTCGATCTGAATACATTAGCAGAGTGTGGAATTCCGTGAGAACA
AATGATAATGGGGGTATTTCTTTGCCGTCCGGTCCCGAAGGGTAGGTTACGAGCGAGCCT
TGGGTGACAACAGAATTTGAGTTCTGTTGAGATGTCGGGTCCAACTGACCATAGAAGATA
CCCTGTTCGGTAAGCCAGGCAAACGTTTTAGGCATTTCATTCTTATCAAAGTAATATTGT
AGCTCAGAATATTTTAACGTAGAAGGTATTTCCTGAAAACCTGTTTCTGGAATGGTTAAA
TACGGATAAAAGACTGACTTCAGAGATGGTTTGTTCTCAGAAAAAATGGCATGCCCGATG
AACTGGTAAATTCTTGTTGGTGTTGTCACAAATATACAGTACTTTTTTGTTCCGGCAACC
CTGTGAAATTTTATTCCAGTTATGGGTGTGTCTGCCCCCTTTCCAATGTCGAAAATCTGT
CGCCAGTACTGTTCACTGGCAATGAACATTTTGTCATTGTTCGGTTCTAACTCAGTTTCT
AGTAAATGTCCTTTAGAAGTGCCTAATAAAATAGGTCCCGTCATGTTGTTAGATGTGTTT
TCAAAATTCCAACCAACTTCAGTAATTTCATAGTTGGGGATTTTGCTGACAAATTTTAGT
TTCGAGCTCTTTTGATGGATATAGGCTAGTTCAGGGCATCCATCTTTTGTTTTAGATGAA
AATGACATTAAGAGATGACATCCGAGTGGATCCAGAAACAAACCGCTCAATTTAGAGGTT
GGCTGACAATATTTTGAGTAGTGAATTTCTTGCTCAGAATCAGGATTCCTTATGTCCATT
CTAAACAATTTCCCATTCGCCATAGCCACCACTAAGTTATCACTAGAAACGGCAGCGTGA
GTGATTAAATCCGATGGGTTGAGGTTCATTTTCTGTTTCGTAAACATCGGTACATTATCT
TCGAGCTGCATATTGATGTATCCTGAAGATATCATGGGCTCAGCAGGTGGCTTTGTTCTA
TAGGAAGCCTGTGCTGCTTGCTTATACTGATCTAATATCGAAGTCATTTTGGAAAAAACA
GTTCGTATAACTACACCGACGACAGCGAACAGTAATTATAGCTCTGTGATAAACATTACA
CTTTATTTAAGTACATTTTAAATTTTAATTAATTTGATTGACATAAAAACAAGTACCAAG
TATGATGTTTTTTTGTTCAATTATATAGGCAAGGGGAATGTCATCCAGTAGTCCAAAGCC
ATGTCAATGTCAATATTTCCACATTTAATAATTCAATCATTTTAAATACATCAAATTAAT
CTTAGTTTAAGTATAAGTTCCCAGAAATGCTAGACTTTGATTTCAAATGTAATAATGTCT
TGGAGAAGTTCTAAGTAATTGAGAAAATTGAGATCACACATTCAATTTATATCTTAAAAT
TTCTCGAAGCGAACAGCAGTATATTAAAGTTGTTTTTGTTGCTTTTTTATAGAAGGTAAA
TGTTTAAAAATGAAATAATATTATTTTTATGTTGTCAAACAGCGAGAACGGATATGTGAA
TGTGAACGGCGAAAAAGTGAAGTGTGGTATTTGAAGTCCTAATAATTAAATTGAGTTTTA
ATTAGTAGTTTATTGAGAGTTTTTATTTATCCCGAGACTTAGCGCGTAGCAGTTTTATCA
AAATTTTGTTACTTCTTCACGCTTTTAACGTCGGGTGCTTTTCATTATTTCAAACGAATT
TCTAATACTTTCAAGTAACTTTGCCGCACTGCCTCTACTATAAGCAGAACGTTAAAGGAT
TACTGAGGAGATTTCGTTTTACACAAATACATGATTTAAAAAACGACTCAAAAACTTATA
TCTCATCACCTCCACTTCACCTCCACAATATTTTATATAAAGTATCATTACGTTCCCACC
ATTAGTTTATAAATTATTTTATACTGGTTGACCCGGCAGACTTCGTAGT
(3889 bp)

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