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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64051_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_collagen_alpha-1(XVIII)_chain-like_[Bombyx_mori]
Ontology
GO:0001525 P angiogenesis
GO:0005198 F structural molecule activity
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005582 C collagen type XV trimer
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005788 C endoplasmic reticulum lumen
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.72 TPM:1.26
ORF EntryO_BomoEE10246_complete:A_BomoEE_comp64051_c0_seq1
Sequence
(Nucleotide)
GTCGGTCGTTTAGCTTCAATTCTAAAGGTGCTAAATCAATTGATAAAACCCGTATTATAA
TTAGGTAATAACTGTAATGGATGCTCATTATCACACTGACACAATGACATTCGTTTGACA
CATCCATCTGTCAGATTGACAGCCGTCCATTTTGTTTCAAATACAGGAAAGGCGGATACG
ACAGTCCCGCGTTACGTGATAAGATGACACAAACAATTCACAGAAATAAATGTTGAACTT
TCATATACACAAAATTTTCAACACCACACATATTTCAAGTTATATTATACTATGGCGCAC
ATCAATCTCACATGTTACATTACGAGTATTACTCAAGAAGTTGAAGTCTGTACACTAAAA
ACTTTTTACTATGTACCAGCAAACGGTTTTCGGATTCGTTTATCGTACGTAACACGTTTC
TTGGGCCAGCGCTTCTTATGATTGTGTCTCGATGCTTGCGACGATAACTCGACGCAAAGG
ACTATAAGTTTATTATCACAGCTCAATAGTCTTTGTTCTAAAAGTTTGTCTAGAGGAGAT
GCGGTGCCAAACATTTGTTGGCTATCTGAGCTCCACTCGTCACAGTATGCTTTTGTTGAT
CGATTGCCTAGAGTATCAGCACCTATCCACACCATTTTCTTAGGCCATTGTTGATCCACA
TAGACGTTTCTGTTGTCGAAACTGTAGATATTAGCCTTAGATTGCCCGTGCATTGATCTG
GCTCCATCAAATATGCTACTCCACGAAGGGTAAAGAATTTCCCCCTTTAAATTTGTAACA
GGAATGTTACGTTCTGACGGTTTTACTAATGAAATTAGGTCTGTTACCCTGTTTGAGAGC
ACAGCAACGAATGTTCCGTTATAGTCGCGCATGGACTGTCTGTGGCACTCGTAGTTGATC
GCGCTGTAGCCAACCCTATTTAAGTGGGTCTCCATTCTACCAGAGTAAGGTTCGTTCAGG
GCTGCCAAGCGTATATATCTTTTGTCGTTAGGTGACTTTGACGGTTGATTGTATGGTACA
AGTCTAGGTGCGCTTCTCGAAGGTTGGTACATCGATCCAATATTAACATTCTGCCATCCA
TATTCCACTCTCAACAACAAAATTTGTTCATCCAGAACGTAAGCGAGAGTTCCTACAGGC
GTTTTCGATGTTCTCTTCAACAGACCCTTGTAGGTCTTGAAAATAATCGTGTATGATTTA
AAGAAGGCTTCATCGTCGTTGCTATCGAAATCAACTGTTTCATCAATATTATTCGATGTC
ATCGTAAATCCTGGTTCACCTTTCGGACCGATTATGGACGCTCCTGGTTGACCCGCTTCA
CCGTCTCTCCCAGGTGATCCTGGAGGCCCTGGGGGTCCAGGAGGTCCAGGGATGGGTGGT
TGAGGACTCGACTTCTCACAAATTCCTGGAGGGCCAACTGGTCCTATGGGGCCAGGCTTA
CCGGGACTACCTTCTAGCCCTCGATCCCCCTTTTCACCTTTCAGCTTTGATACGTCTATT
TCCGGGGCTTTATCGCCTTTTTGACCTTTTTCTCCAGTACTTCCTTTTGGTCCTGGAGGT
CCTGTAGCACCCTTTAGTAAAGCTATTTCTGAAGCTGGTACTTTTCCAACTGGTCCTGGT
GCACCTCTTGCGCCTTTGTATCCTCTAGGGCCCATAGGACCTTGTTTTCCTCGGGGACCT
GTAGGTCCTCGAGGCCCCGTGCTTCCAGTTCTACCATCTTTACCGGGTTCCCCTGCTAGA
CCAGTATTCCCTTGATCACCTTTGCTGCCCTTATCACCCTTGTCGCCGTGTTCCCCTTTG
AACCCTCTGAATTTCTCAATGATTGCCGCTTTTGTCAATTCGTCCATTTCTTCGTCCAAA
ATTGAAGCCAAGCTTGCTGGAAGTCCCGCCAGCCCTGGTGCTCCTTTATCACCTTTATCA
CCTGTTCTCCCGTCTACTCCGTGGTTTCCATGCATACCAGGTCTACCATCTACTCCTGCG
TCACCTTTATCACCCTTTTTTCCTTTCTCACCCATTTGACCCATGATACCTTCTTCTCCT
TTTGCACCTTGTTGTCCAATTTCTCCTTTGTCACCTTTTGATCCGGTTTCACCTTTTGGC
CCGGGATACCCTGGTAAGCCAGGTGAGCCTTGCTCACCTTTAGGCCCAGGTATCCGAATC
TGTCGAGCCTTCTTTTCTTCCTCTGTTTCCATGAAACCAGGACCGGGTGGGCCAGGTGGG
CCTCTTAGTCCAGGTTCTCCATCACGACCGGGTGCTCCGTCTTTTCCTGGTGGTCCTGGC
TCCCCAGGCTTTCCGTTTCGTCCAGGTACACCATCGTGACCTGGCTCCCCTACTCTACCG
TCTAGGCCAGGTTTCCCCGCAGGACCTTCAGGGCCTTTCTCCCCATGAAGACCAGGAAGT
CCAGGCTCGCCCCTGGGACCAGCTTCACCGGGAGGTCCTCTCATTTCAGGCATTGTTTCC
AAAAGAGTCGATACCAAATTAGGCGAGCACTCACACTCCCCTTTCGGTCCTCGCTTTCCT
ACGGGGCCAGGGGGTCCTAGCGGCCCAACAGGTCCTTGTGATCCTTCTGGACCGATGACG
GAATTTCCAGGCTCTCCTTTGAGACATTGGTGTCCTTTTTGTCCTTTTTCACCCTTCTCA
CCTTTGTCACCTTTCTCACCTTTCTCCGGGTTTTTAATATATTGAGGTTCTTCTACATTG
TCCGTTGACTCTTCGTTTTCTTCATTAAACTCGTTGCAAATATTTTTTATGGTTTCTTCG
TTTGAGTCCGGATATATTTTTATTTCCTTTATGGATCCCATAAAATTCTTTTCACTGTAA
GGCGACTCTCCCAAAACCAACGTCGAATCCGGTTCGAATAAAACATCCATAGTAGGTCTC
TCGGTGCTCTGCTTAAATAAGAGTATACAGTCCAAACGAGTGGTCAACGAGGTGCGATCG
ATTTCAAAAGTGTATTTTGTCCATGAATCTTTGTCTACTTTCACTACGGTTTCTATAGGG
CTCGTATCGAGGCCGTTGAAGATAAATCTCACTAGAGACTCGCTGGCGGGCTCCATACAC
AAACTGAAGTACGTGTCAGCAACGTTATTCTTAAACTGGAATAAGCATGTCGCTGTTAGT
TCGTCCAATTTGATCACTGCGTTGATAATAAACGGTGTTGGTAGATAATCCCCGATTTCG
ATGATGTCGCTTATTGGTATTGTGACGGATTGATTTGCGAAATTTGGAGCCGGAAAGCCG
TCGGGTGCTACGGTTGTCGGTATGTCGGAAGGTAATTGGTCCAGTCTCAGTAAGTTGTAA
CCACCAGACAAGTAACTGGAAATTGCTCTTTGGAAGAGTAGTATAGAAAATAAAGTGTAC
AAAATTCCCGCCATACTGCCGTTCCGAATTCAAAATCTACACACCACGCTAAATACAATT
ATTCAAAACCACAGCACCAAAAACGTTCAATCAGTACACTCATATTTATCACATTATCGC
TCAGCAAATATTTTTTTATTGTATCGAAGTTTCGCTTCTGGGCACGCGAGGCGCCGGCGC
ATGTGTTACTAACGAGAGCGTGA
(3563 bp)

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