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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64048_c0_seq1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_synaptobrevin_isoform_X1_[Bombyx_mori]
Ontology
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006897 P endocytosis
GO:0006906 P vesicle fusion
GO:0006911 P phagocytosis, engulfment
GO:0008333 P endosome to lysosome transport
GO:0009986 C cell surface
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0017156 P calcium-ion regulated exocytosis
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030133 C transport vesicle
GO:0030141 C secretory granule
GO:0030658 C transport vesicle membrane
GO:0030667 C secretory granule membrane
GO:0030670 C phagocytic vesicle membrane
GO:0031091 C platelet alpha granule
GO:0031143 C pseudopodium
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0035493 P SNARE complex assembly
GO:0035577 C azurophil granule membrane
GO:0043001 P Golgi to plasma membrane protein transport
GO:0043005 C neuron projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0043308 P eosinophil degranulation
GO:0043312 P neutrophil degranulation
GO:0043320 P natural killer cell degranulation
GO:0045177 C apical part of cell
GO:0045202 C synapse
GO:0045335 C phagocytic vesicle
GO:0048471 C perinuclear region of cytoplasm
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0070062 C extracellular exosome
GO:1900483 P regulation of protein targeting to vacuolar membrane
GO:1903595 P positive regulation of histamine secretion by mast cell
Transcript
Level		FPKM:15.22 TPM:26.55
ORF EntryO_BomoEE10244_complete:A_BomoEE_comp64048_c0_seq1
Sequence
(Nucleotide)
AATCGAACCCACGACCCTCGGCACAAAGGTCAGAGGCGCTAATAACTACACCACCGAGTC
AGTCTAGTTTTAAACTACGATTTAATTTAAAAAAAAAAACTAAATTAATACAGCATTCGA
AAATAGCTTTGAACGGATGTAAAAAAACTCATCTCCAATAGCGATTAAAGAACGCCTTAA
TATTACTAGTTTTTTTTATTATAATTATTTTATCCTCAAAGTGTTCGAAAAAACGTTAAT
TTATTCCATTCGAAATAACGATATTTAATCAGGTTGCAATAATATATTTGTCTTTTTCAC
GGTACCAGTTTCGTGAGACAATAATGTTAATAATTAGTATATTCTTTTTTTTTTCTTATT
TGATTAACCGACGCAAGATTTCCATGCGAGGCCTCCACACGCCATCGCTCCTATTAAGTA
AACCGCCAATGCTGCTATGGACACCAATATGACATACATTTTGATATTCTTCCAGAATAG
AGAGCGTTGAAGTGTGCGAGAAGTAGCGCGATACGACACTGAACTAGTGGCTAAGTTATC
AGCTTTGTTCACAAGCAGTTCTAGCTTTTCTCCACGCATTGCCATGTTATCAATGTTTTT
AACCATTATATTTTTTAATTCATCTAATTCTCCATGAACTCTTGAAATGTTGTCCAAGTC
TCGAGATTCACTGTAATGTTTCATCTCAGTGGCAAGAACCCGACCAAATTCACTGTTCAT
GGCGTAAGGTATTGCTGTCTGTGCGGTGTCAGCAAATGCTGTAGTGAATCTTCTTTTTAT
CTCATTAAGAAATAAGAACGCTCTCGAACGTTGGAATTTATCGTCAGTGATGCAGAAATA
AACCAATTTGTTCTCTGCTATGTAATGGAATAGATAATTTCCGTGAGAATATGTCAACTT
ATCGTCGTGGGGCGGAATCTTTGATAAAATCTGCTCTGCGACTTCAGTGAAATTACCCTG
ACAAGTTGCATATTTAGCGAGGACTACAGTGCCTCTAGCCACGATACTGAATAATATAGG
CATTGTGAATAATCGCGTAAACGACACAAAGAACACAATGTTACCAAATCACTATTTACA
CACGCACACCTTCTTTAGGTAATGGAATAAAATTTTGGATAAATATTTATTCAAACTAGA
AAATAATTATCGGGCAATGACCGTGACAGAAAATATTAGGTATAAATTGATTTTCTTGAA
ATGAATTCGGTATGTTTATGGTATACCTATTTACTGAAAATATGAAATTTTAATCACTCA
CTAAAACAGAGAACAACACAAAACACACTACATAAGTGTATAATCTATGCACCCATCA
(1318 bp)

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