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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp63910_c0_seq2
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_nuclear_pore_complex_protein_Nup214_isoform_X2_[Bombyx_mori]
Ontology
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0007184 P regulation of SMAD protein signal transduction
GO:0015031 P protein transport
GO:0046826 P negative regulation of protein export from nucleus
GO:0051028 P mRNA transport
GO:0090204 P protein localization to nuclear pore
Transcript
Level		FPKM:2.39 TPM:4.18
ORF EntryO_BomoEE10089_complete:A_BomoEE_comp63910_c0_seq2
Sequence
(Nucleotide)
TTTTTTTTTTTTCTTATATAAGCACTTTAATAAAGCGACACGATTATAAAACTCACTGAC
GTAAACATCGGATAATCATACATAATTATTTACTATTGCAAATCAGACTAAAGCTGCTTC
CCTACTTTCGTTTGATGGGTAGATTTCGTTTCTCGCGTAGCACTCTTTAGCCGCGCCAGC
CAGTGAACGATGGAGACGTATTGAAACTTGGAGCTTGTTGCTGTTGTTGCTGACCAGATT
GCTGAGCTAGATTACCGAACGTGAGGGTGTTCTGCGTCGCTAAATTCTCGAAAGTCGAGT
TCGACTGTGTAGACCCGAAACCTGATATAGGACTGGCCATTCCCCCAAACATTTTCCCGG
GGGAGGTGTTCCCGAAGGCCGGAGTGCCGCCGAACACGCTTCCAGAACCGAACGAAGCCG
GCGCTCCGAATCCGCTGTTCGGGCTCTTGTTGAATCCACCGAAAGACCCAAAGCCACCAG
CAGACTGACCGAATGTTGGCTTAGAACCGAATGCAGCAGGGCTACCAAAGCCGGGAGCCG
CTTGCTGTTGCGGAGATCCGAAAACTGAAGGCTTAGTTTCGGCGCTACCGAATGGCGAAG
TCTGTTGGGTGCCACCGAAGGCTTGGCCGGACTGAGGCGAGCTGAAGCTACCACCGGAAC
TGTTCCCAAATATCGACGAGCCCTGTGTTGTTGTCTGTTGACCAAATCCAGTTGTGCCAA
AGCCAGTGTTGCCAGCGGCGTTACCGGATCCCCACAAATTCGTAGCGGGTTTATCTCCAA
ACGTAGTTCTACTGCCGAATATCGAAGACGCACTAGAATTTGACTGACCAAAGGTTGTAC
TGCCTCCGAAAACATTAGTACCGCTGCTACCGAAAATAGACCCCGACGACCCTCCAAATA
TATTCCCGCCGGCGGTCGGAGACGCAGCGCTTGTAGTCGAGATACTTGCGGCTGCAAATA
AATTAGATTCACCGCCTCCAAACAGAGAACCGCTCTGGGCCGCCGTCGTCGGAGTTCCGA
ATAACGATGCTTGAGTTGTAGACGTCGGAGTACCGAATATAGACGCCTGCGTCGTTTGCG
TGTTACTTCCGAACACAGATGTTTGAGCTGGCTGGGTGGAGCTACCAAACACTGAGGGCT
GAGTGACAGCGGGGGTCCCGAACACGGAGGCCTTGTTTTGCGACGGAGTCCCAAACACAG
AGGCTTGACTCGTCTGAGTCGGACTACCGAACAAGGACGGTTGAGTCGTTTGGGCGCCGA
AAACGGACGCCGAAGTCGTTGGCGTCGCAGTACCAAACAACGATGTTTGTGTTGTTTGGC
TCGGCGATCCAAATGCCGCAGCCGGCGCAGCCGAGGTTGGCGTTCCAAACACCGACGCTT
GGGTCGAAGGTTGGCCAAACACTGACGACTGATTCGCCGCAGCTCCAAATATGGACGAGG
CTTGTGTGTCTGATGCAGCGCTACCGAATACGCTTTGAGTCGTTGTAGTCGCAGTCCCGA
ATAGAGATGGGGCGCTTGTGGTAGGCGTGAACACACTCGCAGTTGTCGTGGGTGTGCCGA
AAGCTGAAGCTTGGGTTGTGACTGCGCTAGTTCCGAATATCGAAGATGCAGTTGTCGGGC
TAAGTGTTGACGACTGTGTGGTCGCGGACGCCGAAAATACCGATGATGTTGCTGAGGCAA
AGGCAACAGTTGAAGACGTTGTGGCCGCCGCAGTTGAGGTCGTTGTTGCTGCCATAGTTG
AGGTCGCTGTCACACTCGCGCTAGGTACTGCGGTCGATACAGGTACAGGCGTTCCGAATA
CTGATGTGACCGGTTTCGGTGCGCTAAGCACCAATGGTTTTGGTGACTCACTGGTCGTGG
CTGGTGGTGTCCCAAATATGGAACCCGTCGCAGATCCTCCAAATATAGAATTTTGTGTTG
TAACACTAAAAGGCGTAGCTGTACTGAATATTGAGCTAGATGCTGTAGTTTTTGGTTGTG
ATGCGACGGCTGTTCCAAAAATGGAGACAGCAGAAGTCGTCGCTGGTGATGCAGTGTTAG
TTTCTGTTGAAAGTTCATCCTTTGTAGGCACATCAGGTTTCGGCTGGATCGGTGAAGTAG
TTGAAGCGGCTATTAGCTTGGAAGATTCGTTCACGGCACTGAATATCGAAGTTGTACTAG
ATGTGGCTGGAGTATCAGGCTGCTTGGCTGTTTCAGATTTCATTTCTAGCTTAATCGGAA
TGGTCTGCGTTGTTAGTACATTCGAACTTGTTGCAACTGGTTGAACTACCGGTATCAGCG
GTGACGGTTTAACTATTTGCGGGACAAACGTTTTAGGAACATTTTCTTTTTCGGCAATCT
TTTGAACGACTTTAGATTCATCGTTGACTTTGGCCGCTATGTTCTCTTTTGGTTTCTCTA
TCGCGTTTTCATTGTGCTTCACGACGGCTCTCACTTCTGTATTCGGTACTTCTTGATGAC
TTTTCAAAACGTCCGGTACATTAGAGATGGTGGGTGCAAATGGGGTAGTTGGTTTCATAC
CAAACAGGTTGGTAATAGGTTTATTAACCTTCTTGCTGTCGGCTGGTTTTGCTGCACCTT
CAGGTTCGCCGGTTTCACTGGATTTCACAGAAGCGACAGTCACAGGTTTGGGTTCAAAAA
CCACAGGCTGTGTTTGAGCACTCGAAGACAAGCTATTTTGACTAAGTCCAAGATTCGCTG
TCGACTTATTGGCCGGCACTAACGATTCCGCAGTAGCTGGTTGATTTGAGAACGGAGAAA
TAGGTGAGCATATTTTCTGTCCCATGAATTGCTTCAAGTCATTGTTAGGCGTTTGATTTG
AAGACATATTAGGTACAGGCGATGTGTATGAGAATGGGGGTGGTGCATAGCAAACTCCAG
TAAAATTAAAAGATTCAACAGGAATTCTAACTCGGGGTTCTTCGGGCTTCGGTTCGGTAA
ACAATGTTCTAGTGACGTTTTGAAGTCCCGGTACTGAGGGTTTGCTCTGAATGGGCGAGA
ACGGCGCTACTGTCTCGGTAAATTGTTTTGTTTCCATTTTAGGTTCAGCTTTAATAACAT
CTTTAAGGGGCACGCTTTCTTCAACAGGTTCAATTTTAACTTGCACTTCTTTGTTTACGT
ATTTTTCCGCGCTTGTTGCTTGTTGAGCTTTTTCCTGCATAGATTTTTCGTACTTAGACC
GCATCGTCGCCAAGTGATGTCCCATTTCAATGTCTACTGGCTTTATTTTAACTATTTTAT
GGTTCGATAGCATATCTCTTAAAGCGTCGTACTTTTGCGGCGTGAGCAGGGGCTTCTTTG
TCTTCGTTTCCGGTTCTATGCTCATATTCAATATGTTCTTCGTTAACTTCGAGAGAGGAT
CTTTGTTCCTAAAAGGAGTGCTTCTCAACAGCGACGGAGATTTGCTTAACGGTAATATGT
CACATTCCTTGAGTGCATTACGCAGGTTCCTTAAAACGGTCTGTTGTCGGCTCAGGATCT
CTTGTTGCTTCACCAGCGGCTGGTACACGTCGTCCAGTCTTGGACGTATCATGTACTTTC
CCTGTTTGGCATTTGGATCATTCTCGACTATTTCGTTCCATTTATAATCCAGCGCTTTCT
GTGCTTGTTCCAGTTGATTCCGCACGTAATAAGCAAGTTTCTTCACTGATGCAACTTTTT
TTATTGTCAGCGGATCCGCTTGCGTCCATTGTTGTAGATCTTTGGTGTTAGCATGTGTAC
GGGCTTCTGCGACTAGAGCGCAGGTGCGGACAAGTTCCAATTTTAGTTGTATTATCGCGC
CCCTTAAGTCTTCCAGTGAACAATCTTTCTTGAGCTGCTCAGAGTCTAGCGAAGTTAAAT
TGAAATTTGCACTTATAGATTCGATGTCGCGTTGAAGCTTAACTTGAGTTTCCCTCGTTT
TAACCATAAACTTGTACAGTTCCATTTGGAAATCGTTAACTTCTTTAACGAGCATGTTCT
TTAATTCTTGGTTAGCTTTCATTTTATTGATTCTCTCTTGTTCTTCTTTTAGCGCAGCGT
TCTCCTGTATCTGAGGGGATTGAGGAGTTGGAGCCACTGCCGCTTTGGGTTGCGGTTGGT
GTATTGTTTGGTTGGCGGCAGCCGGTGGTTTGGGTTGAGATAAAGGCTGAAGCTGTTGTT
GCTGTATGGGCGGTGGTGATTTTTTTTCTGGCATTGCTTGACTATTTTGATTCGTTGCAG
CCGATCCAAACATTGAAGTAAATTGCGGTTTTGGTACTTTTATTACATTGGATGCACTCA
AGCCACTTGTCGGGAGTTGGGGCTGAGCTGCAAAATTGCTAACAGCGGGAACAGATGCTG
GTGGATTCGGTTGTTGTTGGATGGGCTGAGGGGCCGGAGCTTGTTGGATTACTTGAGGCT
TGGGCTGTACGATAGATACGGTTGAAGCTTCTTCTGGTGTTTCGCCCGGTATTTCACTCG
TTAACGATGATGCGGGTAACGTGAATTGCTGAGGTGGGGCACAAACTTGAGGGGCTCCTC
GATTCAAGTTCACAATATTGAATATTGTTAGAAGACCAGATTGTGAAACGATCAGCAGGG
ACGGCATGTATGGAAGCGTTTCATTCTCACCCCAAGGCAGTTGTTGTATGGCACATGTGT
CAATAGCTATTCCCACAGGATAATTCTCCAATTTCTTGTCTGTCAATGGTAGCTCTGGTC
TGCCTTCGTCTGTTTGACACCACTGTATCCAGTTGGAACCGTCAGTCGATGCCAGCGTTG
CTATTTCCATACTGTTTGATGATGAAGCTAAAATAATATTCCATTGTGCTATCCCAAGTA
GAAAATAATACCAGGGCCTGATAGAGCCCATACTGAAACATACATCTTCATAATTGAGGC
AAGTAGGTTGTCCCGTCTTTCCAGCATTCACTATTGTAACCGATGGCCGGCTGTCATCGC
CAATACTTTTATAAACGACAGCAAATTGAAAAGTGGATATCCAATACACAGCTAATGCTT
CAATTGACGATCCTTCAGGTAACATCGGAGCTGGTATTGTTTTTGCAAGAGTCAAGTCTG
GTTTGTACTGACACAGTGTCCCGTCATTGTTGCCTGTCACCAACTGTTTCCCTTTTGGAC
TCCAACAAATACATCTCGCTTTTGTTTGTACTTTCTTGACCTGGTTTGTGGTAACTTGAC
AGGCAAGTAAGGTACCATCTTGGAATGCTAATGCTAAAGAGTCCGGTATGCAAGGGTTCC
ATTGTAATGCTGATACAAATGTTGATGGATTCACATTGGTCTTCATAAATATTGATGGTG
ATACATTCTGATTCTGAAAGTCTGTGACTTTAAACACGGAAAGAGATTGCGAACCAGCCA
CTGCAAGTAGTTCATCATCGCAACTAACAGCAATATGCGTAGCACACTCTTGAAGCTTCA
CATTTGTATGTTGTGTCTCATTAGATATCAGTTGTTTTAGGGAATAGACTGAAAGTGTCC
CATCAGGAGCAGCAATGAAAACAATGCCATATTTGCTGCTACAGGCCACCAAATTGTAAC
CCCGATTTGACAATTTTTCTGTTGTGTTAAATACTTTTGTCTTGTGTTGCAATTTATACA
ACAAATTCGGTTCATCAATAGAATTTGGTCCATACTTTGATTCCATGCTGCAGTCGGTTT
CAAAGTTCTACCTACAGCTACCTCACAAAGAATACCTCAATATCTTTATCAAAATACGCG
CTACAAGCCTGCGTTCAATACATCGGTAATTTATTGATTAAGGATACAAAATTCGAAGAG
TATTAATTTGTAGCACAATTGGCAGTCAATTCATATCGTTTTG
(5803 bp)

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