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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp63910_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_nuclear_pore_complex_protein_Nup214_isoform_X2_[Bombyx_mori]
Ontology
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0007184 P regulation of SMAD protein signal transduction
GO:0015031 P protein transport
GO:0046826 P negative regulation of protein export from nucleus
GO:0051028 P mRNA transport
GO:0090204 P protein localization to nuclear pore
Transcript
Level		FPKM:23.15 TPM:40.38
ORF EntryO_BomoEE10084_complete:A_BomoEE_comp63910_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTTCTTATATAAGCACTTTAATAAAGCGACACGATTATAAAACTCACTGAC
GTAAACATCGGATAATCATACATAATTATTTACTATTGCAAATCAGACTAAAGCTGCTTC
CCTACTTTCGTTTGATGGGTAGATTTCGTTTCTCGCGTAGCACTCTTTAGCCGCGCCAGC
CAGTGAACGATGGAGACGTATTGAAACTTGGAGCTTGTTGCTGTTGTTGCTGACCAGATT
GCTGAGCTAGATTACCGAACGTGAGGGTGTTCTGCGTCGCTAAATTCTCGAAAGTCGAGT
TCGACTGTGTAGACCCGAAACCTGATATAGGACTGGCCATTCCCCCAAACATTTTCCCGG
GGGAGGTGTTCCCGAAGGCCGGAGTGCCGCCGAACACGCTTCCAGAACCGAACGAAGCCG
GCGCTCCGAATCCGCTGTTCGGGCTCTTGTTGAATCCACCGAAAGACCCAAAGCCACTAC
CCGTAGGAGAACCAAAACCAGCAGACTGACCGAATGTTGGCTTAGAACCGAATGCAGCAG
GGCTACCAAAGCCGGGAGCCGCTTGCTGTTGCGGAGATCCGAAAACTGAAGGCTTAGTTT
CGGCGCTACCGAATGGCGAAGTCTGTTGGGTGCCACCGAAGGCTTGGCCGGACTGAGGCG
AGCTGAAGCTACCACCGGAACTGTTCCCAAATATCGACGAGCCCTGTGTTGTTGTCTGTT
GACCAAATCCAGTTGTGCCAAAGCCAGTGTTGCCAGCGGCGTTACCGGATCCCCACAAAT
TCGTAGCGGGTTTATCTCCAAACGTAGTTCTACTGCCGAATATCGAAGACGCACTAGAAT
TTGACTGACCAAAGGTTGTACTGCCTCCGAAAACATTAGTACCGCTGCTACCGAAAATAG
ACCCCGACGACCCTCCAAATATATTCCCGCCGGCGGTCGGAGACGCAGCGCTTGTAGTCG
AGATACTTGCGGCTGCAAATAAATTAGATTCACCGCCTCCAAACAGAGAACCGCTCTGGG
CCGCCGTCGTCGGAGTTCCGAATAACGATGCTTGAGTTGTAGACGTCGGAGTACCGAATA
TAGACGCCTGCGTCGTTTGCGTGTTACTTCCGAACACAGATGTTTGAGCTGGCTGGGTGG
AGCTACCAAACACTGAGGGCTGAGTGACAGCGGGGGTCCCGAACACGGAGGCCTTGTTTT
GCGACGGAGTCCCAAACACAGAGGCTTGACTCGTCTGAGTCGGACTACCGAACAAGGACG
GTTGAGTCGTTTGGGCGCCGAAAACGGACGCCGAAGTCGTTGGCGTCGCAGTACCAAACA
ACGATGTTTGTGTTGTTTGGCTCGGCGATCCAAATGCCGCAGCCGGCGCAGCCGAGGTTG
GCGTTCCAAACACCGACGCTTGGGTCGAAGGTTGGCCAAACACTGACGACTGATTCGCCG
CAGCTCCAAATATGGACGAGGCTTGTGTGTCTGATGCAGCGCTACCGAATACGCTTTGAG
TCGTTGTAGTCGCAGTCCCGAATAGAGATGGGGCGCTTGTGGTAGGCGTGAACACACTCG
CAGTTGTCGTGGGTGTGCCGAAAGCTGAAGCTTGGGTTGTGACTGCGCTAGTTCCGAATA
TCGAAGATGCAGTTGTCGGGCTAAGTGTTGACGACTGTGTGGTCGCGGACGCCGAAAATA
CCGATGATGTTGCTGAGGCAAAGGCAACAGTTGAAGACGTTGTGGCCGCCGCAGTTGAGG
TCGTTGTTGCTGCCATAGTTGAGGTCGCTGTCACACTCGCGCTAGGTACTGCGGTCGATA
CAGGTACAGGCGTTCCGAATACTGATGTGACCGGTTTCGGTGCGCTAAGCACCAATGGTT
TTGGTGACTCACTGGTCGTGGCTGGTGGTGTCCCAAATATGGAACCCGTCGCAGATCCTC
CAAATATAGAATTTTGTGTTGTAACACTAAAAGGCGTAGCTGTACTGAATATTGAGCTAG
ATGCTGTAGTTTTTGGTTGTGATGCGACGGCTGTTCCAAAAATGGAGACAGCAGAAGTCG
TCGCTGGTGATGCAGTGTTAGTTTCTGTTGAAAGTTCATCCTTTGTAGGCACATCAGGTT
TCGGCTGGATCGGTGAAGTAGTTGAAGCGGCTATTAGCTTGGAAGATTCGTTCACGGCAC
TGAATATCGAAGTTGTACTAGATGTGGCTGGAGTATCAGGCTGCTTGGCTGTTTCAGATT
TCATTTCTAGCTTAATCGGAATGGTCTGCGTTGTTAGTACATTCGAACTTGTTGCAACTG
GTTGAACTACCGGTATCAGCGGTGACGGTTTAACTATTTGCGGGACAAACGTTTTAGGAA
CATTTTCTTTTTCGGCAATCTTTTGAACGACTTTAGATTCATCGTTGACTTTGGCCGCTA
TGTTCTCTTTTGGTTTCTCTATCGCGTTTTCATTGTGCTTCACGACGGCTCTCACTTCTG
TATTCGGTACTTCTTGATGACTTTTCAAAACGTCCGGTACATTAGAGATGGTGGGTGCAA
ATGGGGTAGTTGGTTTCATACCAAACAGGTTGGTAATAGGTTTATTAACCTTCTTGCTGT
CGGCTGGTTTTGCTGCACCTTCAGGTTCGCCGGTTTCACTGGATTTCACAGAAGCGACAG
TCACAGGTTTGGGTTCAAAAACCACAGGCTGTGTTTGAGCACTCGAAGACAAGCTATTTT
GACTAAGTCCAAGATTCGCTGTCGACTTATTGGCCGGCACTAACGATTCCGCAGTAGCTG
GTTGATTTGAGAACGGAGAAATAGGTGAGCATATTTTCTGTCCCATGAATTGCTTCAAGT
CATTGTTAGGCGTTTGATTTGAAGACATATTAGGTACAGGCGATGTGTATGAGAATGGGG
GTGGTGCATAGCAAACTCCAGTAAAATTAAAAGATTCAACAGGAATTCTAACTCGGGGTT
CTTCGGGCTTCGGTTCGGTAAACAATGTTCTAGTGACGTTTTGAAGTCCCGGTACTGAGG
GTTTGCTCTGAATGGGCGAGAACGGCGCTACTGTCTCGGTAAATTGTTTTGTTTCCATTT
TAGGTTCAGCTTTAATAACATCTTTAAGGGGCACGCTTTCTTCAACAGGTTCAATTTTAA
CTTGCACTTCTTTGTTTACGTATTTTTCCGCGCTTGTTGCTTGTTGAGCTTTTTCCTGCA
TAGATTTTTCGTACTTAGACCGCATCGTCGCCAAGTGATGTCCCATTTCAATGTCTACTG
GCTTTATTTTAACTATTTTATGGTTCGATAGCATATCTCTTAAAGCGTCGTACTTTTGCG
GCGTGAGCAGGGGCTTCTTTGTCTTCGTTTCCGGTTCTATGCTCATATTCAATATGTTCT
TCGTTAACTTCGAGAGAGGATCTTTGTTCCTAAAAGGAGTGCTTCTCAACAGCGACGGAG
ATTTGCTTAACGGTAATATGTCACATTCCTTGAGTGCATTACGCAGGTTCCTTAAAACGG
TCTGTTGTCGGCTCAGGATCTCTTGTTGCTTCACCAGCGGCTGGTACACGTCGTCCAGTC
TTGGACGTATCATGTACTTTCCCTGTTTGGCATTTGGATCATTCTCGACTATTTCGTTCC
ATTTATAATCCAGCGCTTTCTGTGCTTGTTCCAGTTGATTCCGCACGTAATAAGCAAGTT
TCTTCACTGATGCAACTTTTTTTATTGTCAGCGGATCCGCTTGCGTCCATTGTTGTAGAT
CTTTGGTGTTAGCATGTGTACGGGCTTCTGCGACTAGAGCGCAGGTGCGGACAAGTTCCA
ATTTTAGTTGTATTATCGCGCCCCTTAAGTCTTCCAGTGAACAATCTTTCTTGAGCTGCT
CAGAGTCTAGCGAAGTTAAATTGAAATTTGCACTTATAGATTCGATGTCGCGTTGAAGCT
TAACTTGAGTTTCCCTCGTTTTAACCATAAACTTGTACAGTTCCATTTGGAAATCGTTAA
CTTCTTTAACGAGCATGTTCTTTAATTCTTGGTTAGCTTTCATTTTATTGATTCTCTCTT
GTTCTTCTTTTAGCGCAGCGTTCTCCTGTATCTGAGGGGATTGAGGAGTTGGAGCCACTG
CCGCTTTGGGTTGCGGTTGGTGTATTGTTTGGTTGGCGGCAGCCGGTGGTTTGGGTTGAG
ATAAAGGCTGAAGCTGTTGTTGCTGTATGGGCGGTGGTGATTTTTTTTCTGGCATTGCTT
GACTATTTTGATTCGTTGCAGCCGATCCAAACATTGAAGTAAATTGCGGTTTTGGTACTT
TTATTACATTGGATGCACTCAAGCCACTTGTCGGGAGTTGGGGCTGAGCTGCAAAATTGC
TAACAGCGGGAACAGATGCTGGTGGATTCGGTTGTTGTTGGATGGGCTGAGGGGCCGGAG
CTTGTTGGATTACTTGAGGCTTGGGCTGTACGATAGATACGGTTGAAGCTTCTTCTGGTG
TTTCGCCCGGTATTTCACTCGTTAACGATGATGCGGGTAACGTGAATTGCTGAGGTGGGG
CACAAACTTGAGGGGCTCCTCGATTCAAGTTCACAATATTGAATATTGTTAGAAGACCAG
ATTGTGAAACGATCAGCAGGGACGGCATGTATGGAAGCGTTTCATTCTCACCCCAAGGCA
GTTGTTGTATGGCACATGTGTCAATAGCTATTCCCACAGGATAATTCTCCAATTTCTTGT
CTGTCAATGGTAGCTCTGGTCTGCCTTCGTCTGTTTGACACCACTGTATCCAGTTGGAAC
CGTCAGTCGATGCCAGCGTTGCTATTTCCATACTGTTTGATGATGAAGCTAAAATAATAT
TCCATTGTGCTATCCCAAGTAGAAAATAATACCAGGGCCTGATAGAGCCCATACTGAAAC
ATACATCTTCATAATTGAGGCAAGTAGGTTGTCCCGTCTTTCCAGCATTCACTATTGTAA
CCGATGGCCGGCTGTCATCGCCAATACTTTTATAAACGACAGCAAATTGAAAAGTGGATA
TCCAATACACAGCTAATGCTTCAATTGACGATCCTTCAGGTAACATCGGAGCTGGTATTG
TTTTTGCAAGAGTCAAGTCTGGTTTGTACTGACACAGTGTCCCGTCATTGTTGCCTGTCA
CCAACTGTTTCCCTTTTGGACTCCAACAAATACATCTCGCTTTTGTTTGTACTTTCTTGA
CCTGGTTTGTGGTAACTTGACAGGCAAGTAAGGTACCATCTTGGAATGCTAATGCTAAAG
AGTCCGGTATGCAAGGGTTCCATTGTAATGCTGATACAAATGTTGATGGATTCACATTGG
TCTTCATAAATATTGATGGTGATACATTCTGATTCTGAAAGTCTGTGACTTTAAACACGG
AAAGAGATTGCGAACCAGCCACTGCAAGTAGTTCATCATCGCAACTAACAGCAATATGCG
TAGCACACTCTTGAAGCTTCACATTTGTATGTTGTGTCTCATTAGATATCAGTTGTTTTA
GGGAATAGACTGAAAGTGTCCCATCAGGAGCAGCAATGAAAACAATGCCATATTTGCTGC
TACAGGCCACCAAATTGTAACCCCGATTTGACAATTTTTCTGTTGTGTTAAATACTTTTG
TCTTGTGTTGCAATTTATACAACAAATTCGGTTCATCAATAGAATTTGGTCCATACTTTG
ATTCCATGCTGCAGTCGGTTTCAAAGTTCTACCTACAGCTACCTCACAAAGAATACCTCA
ATATCTTTATCAAAATACGCGCTACAAGCCTGCGTTCAATACATCGGTAATTTATTGATT
AAGGATACAAAATTCGAAGAGTATTAATTTGTAGCACAATTGGCAGTCAATTCATATCGT
TTTG
(5824 bp)

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