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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp63874_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		CRM1_[Spodoptera_frugiperda]
Ontology
GO:0000055 P ribosomal large subunit export from nucleus
GO:0000056 P ribosomal small subunit export from nucleus
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000776 C kinetochore
GO:0003723 F RNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005642 C annulate lamellae
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0010824 P regulation of centrosome duplication
GO:0015030 C Cajal body
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0030529 C ribonucleoprotein complex
GO:0031965 C nuclear membrane
GO:0034504 P protein localization to nucleus
GO:0042176 P regulation of protein catabolic process
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
GO:0046825 P regulation of protein export from nucleus
GO:0051028 P mRNA transport
Transcript
Level		FPKM:40.67 TPM:70.93
ORF EntryO_BomoEE10071_complete:A_BomoEE_comp63874_c0_seq1
Sequence
(Nucleotide)
GGTCAAATGGTGGCAAAATGGCGGGGGTTTTTTTTTTTTTTTTTTTATTGAATGTTTATT
CCAAACACAAAATTGAAAGACTTGAGTTAATCGGACCCAAAATTCATCAGGAAATCATCC
CGTGATTTAATTTCCAACATACAATGAAATTGGTTATTACAACATTAAACAAAACAAAAA
TATTACTAACATCGATCCATTGTGTTTTCCTAGAATCTACATGTAATACTTCGATTCTGC
AGCGCACATATTGACATCTGACACTGGTTACATCACAGAGATTAGCATTACTTACATTTG
AAGATTACTTAAAAACAGATTTTCTATAATTTCTAACAATGTAAATTGATGCAGTTTACA
ATCTATAAATATGTACGGCTCAGAAAATGTCTTAAGCTATTAAAATATACTCACTAAATC
ATGTTCTGCTGTCGTTTAAATTCACTTGCATTCATCTTCTTGCATCGGAACCTAGCAATC
TCTTATACAAACTATCATAAATGGTAATATTTTAAGAGCCCAAGACATAGACAATAAATC
AATGGCAACAGGACACAGTATAATTACTAAACTAGTGTTAATACAGTCAGATACATTAAT
ACCGAAAAACCCAACTGAATATTGTATGAACATATCTTAATCTATGTCTGACACGAAAAC
CTTATAGGCGCAAAACTAAAGAAAAAAAATGCATAAGTTTTTTGATTAAAAACATGGGCT
CACTCAAAGCAAGAAACAAGCAATTAAAAAATACAATTGCCCAAATTAACTGAATGTTAG
TTGTTTCAAGTAGTTCATAACCATTTTATTAAGTACTTATTTTACTATTTATTATATTAT
TTACTTTATTTTACTATTATGGAAAAACATGAATTTCCAATGATTGTCTCTATCAGACTT
TATAAAATATTAATTTTGAAGCTAATACAAACCACCATTGATTACAGCTTATGTCACTAA
TTTCCTAATGTCACCTTAAACTGTAGTTATCTGAATAAAATTATCTAATCTATGCACACT
GTTGCCATTTTCTGAGTTTACAGTAATCTCTAATTAATCTTGCATCTCTTCAGGCAATTC
ATGAGGGTTCAGAATGCCGGGCACTGACAACTGCACTGTTCTCTTATCTTCTTGTGCCTG
ACGTAATACAAACAAACGCTCTTCCAAGTACAAATCGCTATCATCTTCACCAGTGTACTC
TCTAATTTGAACTAAGAAGTCTCTGAGATGATCCTTGAAAGCAGGTATATCTTGATTCAG
GTTGAACAGGCCTTGTACAGTAATTTTAATTTGGTTATCAGTTAAGTGTGAAAATGCTGT
TTTCAAGAGATTTGCGATATATTCCTGAATATAAAGAACATTGTCTGGTGTGGGTCCAAG
TGGTACAGTAACTCGGCCAGCCTCTACCAATGAGAAAATGTGAGCCAGGATTGTAGCGTG
CATAGTGAGTCCTGCACCATGTGATGTATCAGTGACTACACTGAAGACATGCTCCAAAAT
GTCACAAAGGTAGGTTCTGTAAAAACTCTGTGCTGCCTGTGGATGTTCCTCAACATTTAA
CAACAGTCGGTACAATATTTGTAAACCGGTATCTGCCACATTCCTCATTGTATGTTTAAA
TGCCCAGATTATGGAATCTAAAACCAACTTGAATTGTGCTGGTGGTATGCTCAAAAATGC
TTTGAAACAGTTTGTATTGACCGCCTGCAGTAATAAGAAAAATTCTGTTCTATGTTCTGG
ATACTCTTCAAAGTCTTTGTTAATCATTTCCAGAGTACATTCAAAGACTGCATCAAATAT
TTTTGGTACTTCAGAAGTTATATGTCCTTCAAGTCTGTGCACGATTGCTGCCATGCAAGA
CAGTACTTCAGGCTCACGAGCTTCAGGAACAGCAGTCCTTTGGTAATCCAAAAGCACAGC
ATCGAGAAGAGGTGGAATAAAGTTTTCCAAAACCATACTGTTATCAATCGAGCGTGTAAC
CCAACTTGAAATAAGGTTCAAAGTTTCCTTTTTTATTATTCTCATATTCTTAATGAGAGG
TTGTTTAGTAACTGCTACGCCATTTAAAGCTATGGCTTGACTTATATTTTCAGACATTAC
TTTGTAAACATTAAGCATGTCAAGGTATATCCTTCCTAATTGCACAACATATGGGTGTGC
TAGTGCACGACATGCACGCACATTTGTTTTCAGTATACTTACAAGTTGTTTAACAGCTTC
AGGGTCTTTCAAGATTTCAACATTACGAGAAGCTTGAGATATAATATCATCCCAAACTTG
ATTAGGCAGAAGCATGTATTTTTCAATTAAAAGTTCTTGGGCTACTTGATCTACTTGGGC
ACTGATCATGTATCCAACAGCTTCATAAAAAGTGTGAACTTGCAATGTTTGTAAATCACA
AATTATAGTACTAATGGTGCCCAATATTTCTTCAATAAAAGGACAGGCTTCTCCAACTTG
AGTAGTGACAAAATGTCGACGGCATTTTATAGCAATTTTTATGAATGTATCACACGCCAT
GTCTTGGACACCATCATGTGTTTCATGCATGAATTCAAAAAGTTTATTGACAACGGTTTT
TAAAAATTTCCAATGTGCACGAAGAAAGCGTGGGTATTGTCCTACGACATACATTATGTT
ACTAGCAATTATAGCTTTGTTATCTTTTCCCTTTTTCTGTTCACAGAGACCTAGAAGCTC
TTTAATCACAATAACCAAAAATCTCTTTTCATCATCCTCAGATAGAGCTCCAGAAATAGA
TCCAATTGCCCAACATAATGTGTTCAAGTTCTTCCATGACCACTCAGTACCATTTACTTG
ATTTTGTAATTTCTCTGTCATAATACGTTCAGTATCTAAATAGTCTAAATGTGTCAAGTA
AACTAATGTTTCTCTCATATTTTTATACAAATTAATGGAGTCTGTGTCCTTCATAAATTC
TCTCACAACTTCACCATTTTCATTTTCAACAACTAACACCTCTTCTGGTTTTGCCATTCT
CGAGATCATAATATACCGAACACTGCTCAAGACATCAGCATACAAAGCTTTTCGGCCTCC
ACTTTTACCCAAATGGTACAAGTTTGACGAACATGGCGCAATTTTGTACAAATCAGCAGC
AAGAGCATTCCAATATTCAAGACAAATTTTGAAAATTTCTACATCTTCTACCTCTGATAT
TAAGACAAGATACCTCAAACCATTCATTAAAGTGTTTGTTAATCCACTCTTTTCTATGAG
CGGACCATGCTCTTTTAGATATGTGCATAAGAAAAGTGCAAGATTTTGAATAAAAACTTG
TTCCTGATCTCGACCAGCTACATATGCTTCACGTATGTTTGTAGTTAGAGGAAGCATAAC
TTCAAGTTGTTCCATAGTTTGTACAAACAAATAAACAAACTGCTGATCATAATTGCTGAC
TGTGACACCGGCAATTTCAGTAAGACAGCTCAATGTTACATTCCTAAACATCGGCACGTT
CAGAAACTTAAATATCAATGTGCTTATCAATTTCATTTCGAAAATATAACCAAGTGGAAT
CCAATTTAAAAATCTCAAAAGAGTGTCTAAGGTCACTCCAACTAAAGGTGCATTTTGTGA
ATTTTCCAAGACAAATTGGCATAGCTGAAAGATTTGACTGAATTCTGAACACATTGTATC
TTTTAGATGCTTAGCTTTTGTTTGTGTGAGCTGGCCTGTACTAAACATAAATACTTCTTC
ACTCAACAACTTGAATATTTCCATATTGTTTTGACAGAGACTTTCATTCGTCTTTGAGGC
ACCCACAATGTCACTGATAAAAGTTTCCCAATTATGGGGCCATTCTCTTTTCAGAACTTG
AATAAGGATCATGTTTAGTTTTTTCAAATAAACTTTGTTGCTTTCCATCGTAACAGGATC
TGATGAATTTTTAATGATAAGGCCAACTATATATTTTTTTATACCCTCACACTGATTTCT
TGGTAATATTTTCCATCTCGTTAGTATTACTTGTTCTAATATTTGTAATGCATAATATTT
AGTTTCTTGATTTTGAGAATATTCAAGTATTGTATCAACACGAGTCCAAGCATCAGGATG
TTCCTTCAAAGCAGTCAGTATATCCTGAGCAACACGTTGTTGATCCCCAACAGCAGAATA
TAAACAGCCAACAATGTTGTCCAATAAATTGATGTCCAATTTTTGATTGAAATCCAAAAG
TTTAGATGCCTGTTGTTCTAAGGTTGCCATTCTGGTAAAATATATTTATTTAGTTAATTT
GTTCCCTTTTTTCCAAAATCAAAATTATTTTGATTAATCCACATTCATTCCTCACCTTAT
ACAACACCGAGAAAATAATTTGCGGCGCAATCAATCTAACGCACTACCATACATACTAAT
CCGTTGTTTTCATGAAGCTTGAAAAAGCTTACACATTTAGTCTATGGTCATAGAAAATAC
TAGTGCGGAACTCCTGTTGAACGTTGCATTGCATTGACTACAGTTTACTCAATGTGATTT
CTTTTAAAATTTAGTGGAGAAATCTTCTGCAAATTTAAAATTAAAAGCTAATTAATAAGA
AAAACTTATTCACTTCATTCTATTGCTAATTTGGGTTCAAAAACAGAAATATGGACTTTT
TAAGTTAAGTGAAGTTAAGTTGTAAGTCAAGTTAAGTCAGTGTAGCTTCCCATCTCATTT
GTTCAAGTCCGTTAAGTTTCAGCAAATTTACACCAACCAACACCAACTACAATTACATTT
AACCACAAGTTATTGAGATATTACTTCTTTTTATCTCACTTGCTAGGCTGTATGCTAATA
TTTTTTATATAATTTTTATGTTGCCATTGTAAGTTGTGAAAAATAAACTATTTTTTTTAG
TTTTTGGTATCTATGGTATTTTTTATCTATGGTATTTTGTGATTAAAGGCTTATTACACT
TGGC
(4924 bp)

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