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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp63869_c0_seq4
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_U3_small_nucleolar_RNA-associated_protein_6_homolog_[Papilio_xuthus]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
Transcript
Level		FPKM:1.78 TPM:3.10
ORF EntryO_BomoEE10066_complete:A_BomoEE_comp63869_c0_seq4
Sequence
(Nucleotide)
TTTTTTTTTTGTTTTTTTTATTTTAATATCATTTTATTTTTGATAAAGTTTGATCTCTAA
TAAACTCATCAACAATATCTTTCTTGAGCATGCCCACAGCTCTTCTATATACAACTGCTG
AATTTGGAGCATTCCCATTCTCAATTTCAAAATTAATATAATCTGCCCAAATTTCTTTGT
TGTCAGTCCCGTGATGATGCACAGCACACTCATAACATTTTCTAATTGCTTTCAAATTTA
GCTTTTCTTGCGATTTTTCGATATTGATCATTATTTTATGAAGTTCAATTTGTGTTGGTG
GTGTCCTAATAAAATCTTCATACAATTCCCTAGTAGCTTTCAGGCCATTATGTTCGTACA
TTTTCTGTAAAAGTTTTGGTTTAACAGCAAGAAGAATTGCATTGTCACAATTTTGAAACT
TCTTGTATAGGGTTTTGATCATAGGCCCTGATTCAATGTTATCTAATAGAATATTATACA
ACTGCAAGGCATCACCAGTATTCAAAGACTTTGTTGCATTTTGTAGTATTACTAAAAGTT
GTTTCTCATCGTCTTTTTTATGAAGTAACAACTGTTCCCAGACACTCTTTAGTTTGGGAT
TTCTCTTTATTGCTGCATTTAAGATCTCTAATAGTTCATCAGTAGTTGTCTCATTCTCCA
GTTTCAACATTTCAATGCCAAACGCATACATGTCATTGCTGAGAAGACCATTGTCATGAC
CGTACATCCAAGCATGTTTTACAGCTTTGATTTTTTGTTGATCGGAACATATATCTTCAC
TCATACCAAGCAAATCATGGATGAAACGTGTGCATAAATTTTCGTCCATAAACAATTGCA
GTGCTTCTTCGTAAATACCTATTACATAACCAACAACTTTAGGAAAATTATGTTCATCAT
CAGCAAATTCCTCTATTTCCTTCCAATGAAAACCCTAAAACATAATATATTAAATAAATT
ATATGTGCTTGGGTACACTATCTATTGTTATTCAAAAAGCAGAAGATATTCCAATGTAAA
TGAAGACAAAAAGTCTCAAAGGTCACCCTTATAAAAAAATATATCAACTGCAGACCATTA
AGTTGACATCAAAAAGTTCAAAACAAGAATTATTAATTTATCAGAACTAATTTACTTCCA
GTTCCTTCAATGCAAGATAAGGCCAAACTTCTTGGTTATTACGATTTGACCATATTTCAA
GTTTTATATCGTCCACTAATCCACCGGTATATTCATACTTGGTACACAAGTCATACAATT
TGAATAGAAACTTCACATTTTGGATATTCTTTGCTCCGTTTCTCCAGATTATATCAGCCT
TCTTTTGCAGTTTCTCCTTTTCTTCGTCAGTCTCCGCCTTAAAGCACAAATCAATTAGCT
CAATGTTGAACAATTCAAGGTACAATGGCTCAGCATCAGGGTTTCTTTGAATTCCCTTTA
AAAGAAAGGCCTTTGCATTTTCTAGATTGTTCTGTTCTAAACTCTCCCATTTGCTCGCCA
TCAACCACATTTGAGGTTTATCACCATGTATCTGTAAATAGTAAAATGTTCCACTTTTAG
ATAAATACATTGTAAAAGGCAGTCATAAATGAAGTCTGTTTGCAGTATGTTAATTTCTAC
AGTAAACAGCCAAATTAGATGCAGTTTTTAGTAATATATTAAGTAGTGTTAAACTTTCTA
ATAATAAGGACAGTAAATAATAATGTTAATTTTAAACGCCCAGCGAAGCGGGCGAGTACG
(1740 bp)

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