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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp63869_c0_seq3
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_U3_small_nucleolar_RNA-associated_protein_6_homolog_[Papilio_xuthus]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
Transcript
Level		FPKM:7.67 TPM:13.38
ORF EntryO_BomoEE10064_complete:A_BomoEE_comp63869_c0_seq3
Sequence
(Nucleotide)
TTTTTTTTTTGTTTTTTTTATTTTAATATCATTTTATTTTTGATAAAGTTTGATCTCTAA
TAAACTCATCAACAATATCTTTCTTGAGCATGCCCACAGCTCTTCTATATACAACTGCTG
AATTTGGAGCATTCCCATTCTCAATTTCAAAATTAATATAATCTGCCCAAATTTCTTTGT
TGTCAGTCCCGTGATGATGCACAGCACACTCATAACATTTTCTAATTGCTTTCAAATTTA
GCTTTTCTTGCGATTTTTCGATATTGATCATTATTTTATGAAGTTCAATTTGTGTTGGTG
GTGTCCTAATAAAATCTTCATACAATTCCCTAGTAGCTTTCAGGCCATTATGTTCGTACA
TTTTCTGTAAAAGTTTTGGTTTAACAGCAAGAAGAATTGCATTGTCACAATTTTGAAACT
TCTTGTATAGGGTTTTGATCATAGGCCCTGATTCAATGTTATCTAATAGAATATTATACA
ACTGCAAGGCATCACCAGTATTCAAAGACTTTGTTGCATTTTGTAGTATTACTAAAAGTT
GTTTCTCATCGTCTTTTTTATGAAGTAACAACTGTTCCCAGACACTCTTTAGTTTGGGAT
TTCTCTTTATTGCTGCATTTAAGATCTCTAATAGTTCATCAGTAGTTGTCTCATTCTCCA
GTTTCAACATTTCAATGCCAAACGCATACATGTCATTGCTGAGAAGACCATTGTCATGAC
CGTACATCCAAGCATGTTTTACAGCTTTGATTTTTTGTTGATCGGAACATATATCTTCAC
TCATACCAAGCAAATCATGGATGAAACGTGTGCATAAATTTTCGTCCATAAACAATTGCA
GTGCTTCTTCGTAAATACCTATTACATAACCAACAACTTTAGGAAAATTATGTTCATCAT
CAGCAAATTCCTCTATTTCCTTCCAATGAAAACCTTCCAGTTCCTTCAATGCAAGATAAG
GCCAAACTTCTTGGTTATTACGATTTGACCATATTTCAAGTTTTATATCGTCCACTAATC
CACCGGTATATTCATACTTGGTACACAAGTCATACAATTTGAATAGAAACTTCACATTTT
GGATATTCTTTGCTCCGTTTCTCCAGATTATATCAGCCTTCTTTTGCAGTTTCTCCTTTT
CTTCGTCAGTCTCCGCCTTAAAGCACAAATCAATTAGCTCAATGTTGAACAATTCAAGGT
ACAATGGCTCAGCATCAGGGTTTCTTTGAATTCCCTTTAAAAGAAAGGCCTTTGCATTTT
CTAGATTGTTCTGTTCTAAACTCTCCCATTTGCTCGCCATCAACCACATTTGAGGTTTAT
CACCATGTATCTGCAACATTTGTCCGATGATACCTGAGATAGCCTGTTGAAACCCCACAC
CCTTACAGAATTTTATATACTCAAAATATATTTCAATTTCATTTTGGAACTTATAAATAA
AGCGCTTGAAAAGTTGGTTCAAACGTTGAGCAATGGCATACTCCAAATCCTTTTTCTTCT
CTGTTAGTTGTATTTTTTTTCTACGCGTTGTTATATCCTCAAGTAAGGCAAGTTCATAAG
CGATGTATTGAACATAATCTTCTTTTTGTTTGACTCTCCTTTGTATGTGATATTCAAACT
CTTTTCGTTTTTGGGATATTTCTTTTATCTCTTCATCTGTATATAAGTTTGTTCTTCTCA
TTTGCTCCAACTCATTTATCATATTCTCAATACGTTGATTTACTTGTTCAGCCATTTTTA
TTTATATCTTTATATTACTTTTATTACACAAAAACACTTTCGTACAAAACGGTGGAATTA
AAATTTTAACCTCTCCTCAAAGCAGCTCGGTTTGTTTGGAATTGGCGATTATTTAGAGGT
TACCATAATTGTCACTTTGACATTACACAACATGAAGCAAAATAAATAATCTAAACATCC
TATGATTCTGTGCTTCCCGCCTATCGCTTTTAGCGCGTTAGTTGGGAAATGTTCTCCTGA
CTATAAAAATTATTATTTAGTATCTTAAAAAGTTTTTAATCCACCAAGATTTTTTTTATA
TGACTGGTGGCTCAAAAGTCTTTCCTGTTTCACCAAGACACGCGACCCCCTGGCTCAGCC
AGGATGATTTGGACTTGCTATCAGCTGCTGAAGAACGGACATATTTTTTTTACCTACTTA
ATCCTAGTAAGTTCAAGGGGTTATACTAACTTTAGCGAATGTACAGCGAGCTCACGGCCA
CCGCCTGAGAGACTCGCTCACCAGGTCTAGCCAATACAGTATAATATTTTATCTTTTCAA
TTATACTCTATGTTAGTCTATAATTGCAGCGCTCCGTATATAATCTACAAATATGCTGTC
TTTAATATTTAAGAAGTCAAGTTTAACTCAAAGTCCATCCGGTGCTTTCAGAGTAATAGC
TCACCTCACCGCAGGAGGTGACTGTCGGCATCTGGATCGTGTTGGACACGAGCATTTTAA
CTGTTTTAAAGAACAACTTAAAGCGCTAATGTACATTTAGAGACACCCTACCTAGAGTTT
AACAAGTACCTACTCTAATGATGATGATCATTTCCAAGCCTCAGATCTGAATATTTAG
(2578 bp)

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