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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp33963_c0_seq1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_symplekin_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005848 C mRNA cleavage stimulating factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0006398 P mRNA 3'-end processing by stem-loop binding and cleavage
GO:0035363 C histone locus body
Transcript
Level		FPKM:15.68 TPM:27.35
ORF EntryO_BomoEE2363_5prime_partial:A_BomoEE_comp33963_c0_seq1
Sequence
(Nucleotide)
GTGCGCGCGCAGGCCGCCCAGCAGCCCCGGCGCCTTGTGCAGCCCGCCCAGCGCCGCCGC
CGGCAGGGACGTCAGCAGACCGAACGATGCCGGCATCAGCCGCTCGCAGCTCTTGATCCA
GCCCTCCCACGCCACCTTGTTCAGCCACGCCTCCTTTTCAATTAGCAGCTGCAGGATGTT
CATGACGAGCGGACTGAGGGCGGGGTACAGGGTGAGGCTCTGCAGCACGGTCCGCATCAT
CAGAACAGGGATCTTCGGCTCCTCGACCAGCCTCTGCAATACTGCTGCCAGGACGTCTTG
CGTGTAAATGTTTTTCTCGGCGAAGCACAGAGCCGTCGCCTTTATGATGTACTTCAGGTC
CGCCTTCTCAGGGTCGATGAGGTGCAGCTCTAGCAGCAGTTCCGCTGGTGACACGGGCGA
CTGCTCGTCGTACGTGCCGTTGATTCCCAACAGCTTGTTGAACACCTCCTTCACGACGGC
AGGGTTGAGCTTGATTAGTTTCGGTAGGGCTGCCACGATCTCTCTCTTTGACAGTCCGGT
GAGCACGGGGATCAAGAATCTAACGTCGGACACTCTGGTGGCGTATATGTCTCGTACTTT
CGACACTAGTTCGGCTGTTGGAGGCACTTTCTCGGTCAGTATATGCACTAGTCTGGTGAG
CAGAGTCTCTGCTCCTCGGGGACAGTTCTCGAGCAGTTCCCTGAAGGCGGGGCGCAGCGT
GGCGTCGTCCTCGTCGAACTCGTTGTCGGGCAGGTCCTTGGACACCATCGCCCGGATCGG
ACCCTCGATGGTTCGCAGTACAACGCGCTTCGCCTCTGCACCGGAGCTGCCGTATATCCT
TGCTATTTCCATCAGTAGTCCTTCTTTTTCTGGGAAGAGCGCCACAACTAAATTCAAGCA
CAGCTTATGTAAATTCTCATTCCACATGATCCTAGTTCTGGTGCTTGAAAGTTCAGGGGG
CGGATGATTCAACGATATGAACCCTAAGTACAGGAGAGCGTGTTTCTCGATGACTTTCTT
AACAGCTTCTGAGCCACGTTTGTAAACTTTGATGGTAGCTTTCAAAGCTATATCGCGGAT
TTCCTCATTTTCGCTCAAAACATGACAGACCAACGATGTCACATATTTGTGTGCCCGAGG
TGGTCTCATCAAACACAATTCCTCTAGCAACTCCAAAGCCAGCAGAGCCACCTGATCTTC
AGTGACCAAGTGCTTCAAATAATCCAGGGCCTCGTCCGTGATCACCGGACTCTCCAAATA
TATCTTCCTTAGTAAAACATCTTTGCATCCTTCCATGACAGGGTCGCCTCTCTCGGATAT
CTGGGTGACCAGAGCACAGAGCAACTGGTTGTAGTTTTGATCGTGCTTCTCGTGCAGTTT
CGGTTGTAGGGTCACCGGATGTCGGTTAAAGCCCTGCATGAATGCGTATTCTTCATATAA
CCACTTCAAAGCGAGGTTGATGCGCTCGGCGGGATTGTCTAAAATGTAATTCAGTACTAG
ATCGCGCGTTTCCGGCGTGTAACTCGAAGCGAATATCGTGATGAATTTGGCCCGGATCTG
TTCGGCTCCACCGATAGCGGCGTCTTTTTCCGCATTTAAAATCCTCTCAACGGCCTGCAG
TATCAACTTTTGCTTTATTTCTTTTGGGATGGGCCGTGTTATTTCCTGTAGTTTCAATAG
CTTCACTTTCTGTTTCAGTTTAGGCACCGTCGGAGTAGGTGGAGGAACCGGTTTCTCTTT
CTCCTTTGCTTTCCTCTCTTCCTCCTTCAAATGTTCCTGTCTCGTTTCTTCCATTAGTTT
AGAAACCGCACTCTCTATCTGCCTGTCTTTTGTTGACTCTTGTAATTTAGCTACAGCATT
TTTGAGGGTAGTTTTCTCATCATCTTCCCTTATTAACGGTATTTTCGCAGCTATATCGGA
TAAGCTCTGTTGTAATACTGTCTGGTTAGGTTGTGTATCTACCTCCATTGATTGTGTAAC
TATTTGTGTATTTTCTGATTCACCTCTTATTAAGCTCATCAACATTTTAGCCAAGTTCTT
CTTTTGTACTTTGCTACCAGAGTTAGGTATTGGCTTGTAATCATTTGTGAACGAGGGCGG
CATGTTATCTGGTAGACAATTCTGCAATGTTTTCATGACAAGATTAACAACATTGTCCAC
AGAATTTAAGCCTTCGAGGATACTGTCTTCTGTTGCCGAAGGCTTCGTGATGCTTGACTG
GCTGTCATCGTCATACATGAATTCACTACGGCTGTTACTGTCGCTACCTTGACTATTACT
TTGAGGTGAATCGATTCTGAACCGTTTAGATGGTGTATCCCCATTCCTAATTTCCCCTAA
GCGTTTGTTTCTTTTCTCTTTCGGTACCGCCTTATTAATCTCTTGTGCTGTCATTCCGAT
ATCAATTAGCAATTGTGTCAACTGCGGCATCATCTCATTAGAAGTTGATTGTTTTATTAA
ATTCAATATCTGCATTTTGAGATGTTTCCTGACTGAATTGACTTGAGACTGCGATAGAGT
TGGAGGTAGTGTCGTGTGAAGATCGCCTAGTGCTTGTATGACTCGGGGCAAGTATTTAGG
ACGGAATTTTGCTAAAGAACATAGCGTTGTCATACAAGCCATCAGGTTTACACTTGATAT
GTGCTGTGAATTATGAAATTTGACCAGTAGTTTGAAGATATGGTCAGATTCCTCTTCGAG
AGCTTTTCTATTGATAAAAGGAACATCTGATGGTAGACTATCCAAGCTGGATTCAGCATC
AACAATGTCACCGGGACTTTGCCGGAGCACAACCTCTTCCAGGAACTTAATGGAATGCGT
TCTGATACCTTCATTCTCACTGTCGATCATGTTTAAAACCATCAACTTTAATTCAGTTAA
ATGTTCCCATACATGTTTCATTTCCGATACTTCAGCGTCACCTTTACAGATCCACATTAA
CGTATTACGGTACAGTATACTGGCTGCTTGGATGGCCCTCTTCTGCACCGCAATGACTGG
GTCAAGGAGTAGGAGACGCAACTGAGCGACAATCTTGGGAAGAAGTTCAGGGTGACTTTT
ACTCAACTCTTCAACAAAATACGCGACCTGCTTCTTTACGTCTGTATTTTTATCGCTGAT
GTAGCTTAGTATATTCTCCATGTATACTGGAATCATTTGCGAGCCTTGATGTAGCAGAAC
TTCTATGACTTTTCTCAATAAGCCTGCTTTTTTGTTTCCTTCCGCCATTCCAGTATCGTT
TATCCATCGTATTAGCTGATTTTGTACTGTAGTATTAGACGTGTGTCCGTGTTTATTCGA
CATTCTGTATTGTTCATATAATAAACAATTCCATTTATTATTTTATTTACAATATTTTGC
AAAATTTTCAACGTAAGAAAAGGGCATCAAGAAATACGGTGATTATCAAAATTTGCACCG
ATTCTTAAATACACAGATTATTTTAATAGTTACCACGTAACATAAATATGTGTGTTATCT
ATG
(3483 bp)

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