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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp33659_c0_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_dual_specificity_protein_kinase_CLK2_isoform_X6_[Bombyx_mori]
Ontology
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001964 P startle response
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007548 P sex differentiation
GO:0007601 P visual perception
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0008407 P chaeta morphogenesis
GO:0009306 P protein secretion
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030717 P oocyte karyosome formation
GO:0031987 P locomotion involved in locomotory behavior
GO:0034125 P negative regulation of MyD88-dependent toll-like receptor signaling pathway
GO:0035071 P salivary gland cell autophagic cell death
GO:0042051 P compound eye photoreceptor development
GO:0045494 P photoreceptor cell maintenance
GO:0046777 P protein autophosphorylation
GO:0048102 P autophagic cell death
GO:0048477 P oogenesis
GO:0048749 P compound eye development
GO:0048854 P brain morphogenesis
GO:0050896 P response to stimulus
GO:2000255 P negative regulation of male germ cell proliferation
Transcript
Level		FPKM:20.40 TPM:35.58
ORF EntryO_BomoEE2209_complete:A_BomoEE_comp33659_c0_seq1
Sequence
(Nucleotide)
ATGTCGATGTTTCACATCTGCCAAGCGTCCCGTGACGGCACATTTTTTTTAAAATATTAC
TTTATTTTATTTACTCTAAAAATGAATCTTGCGACGCAACAAAAAAAAAAACAAATAATG
TCAAGACTGACAAGTCTTTATTTTGAAATAATTATTTATAAATACAAATTGAGAAGTACC
GATTCACAACAAAATATTCCTATAATTAGAGCGTACGACAAAATATTTATCACTTATAGT
TCATTATTATATGTACAAAGTATTCACAAGACGTCGTCGGCCCCCCTCACCGACTCAACG
AGTGCGACCGCGCGCGTTCATTGCCGAGCCTCTGGTGCGGCGGCAGCTTGTTGAAGAAGG
GGTGCTTGAGCGCGTCGCGCAGGGTCACGCGCTGCGAGGGCTCGTACTCCAGCATGCGCG
CGATCAGGTCGAACAGCTGACGCGCCTCCTCGTTGTTGTTCAGTAAGTACCTCAATAATG
GTTTACAATTTTCTCTGACGTATCTGCCAGCAGACGATTTTTCTTCCCAATCTAACTTTC
CATGATAGAAATATTTTGTTCTAGTTTTCCGCGCCATTCTGTACGGTATGGGTCCCAGGA
TCCTCTCCATCATAGCGAGGTGCTCCCTGTTGTCGTGTGTCTGGAAGAGCGTGATCCCGA
GGTACAGCTCGAACATGATGCAGCCTATCGACCACACGTCGCACGGCTGCGACCAGCCCA
GCTCCAGGATGACTTCTGGCGCCCGGTAGTGTCTGGTGGAGACGATGGTGCTGTGGTGCT
CGTGGTCGAAGGTGGCGCTGCCGAAGTCTATCAGTCTAACATCGCTTCGCTTCACGCGTC
TTAAGTCATGTGTCTTCTTAGAACTAGTGTAGACGCTGACGACCTCGTAATCGCTGTCAA
CGAATAATATATTTTCAGGTTTGAGATCGGTGTGCGTCAGTTTGTTGTCGTGCAGGAACA
TCACGCTGTACACGAGCTGGTACGAGATGTGGCGCACCTGCTCCAGCGGGTACGGCTGGT
AGTTGTTGTCTTTCAGGAAGTCAAATACACTTTGACCGAGCATTTCAAACGCGATGCACA
TGTGACCGTGGTACTCAAACCAGTCCAACATCTTCACGCACAAATTCTTACAATCCGGAT
CGACGTCAGCTAATTTCTCTAATACGTTAATCTCAAGTTTGGCAGCCTCTCTGTACTTCT
CGACGTTTTTGATTATCTTCAGAGCCATTCTGTGCTCCAGCTCTAAATCCTTCACCTCGA
CGACTTTGCCGAAGGTGCCCTCGCCGAGCGTGTCGATGATTTTGTATCTCGCTCCCATGA
CATAGCCGGGCCAGTAGACCAGATGTCCGTCCTTGTCGTCCTTGACGGAGGAGCGTGCCC
GGGAGCTCTGCTCAGGAGGAGAACGCGGAGAAGATTCATCGCGATGGTGTCTCCTCCGCC
TGTGTGAAGTGGGTGAGCGTCGGTGATGTGACCGTTTGGAACGTTCATTTCTCCTTCTCC
ACGAGTGCTCTGAGCTGTCACGATCTCTGCTACGGCTGCGTTTCCTGTAGGTTCCCTCTG
CTGATCCATCATCAAGACGACGACGTTTTGCTTCATAGGATCTTGATCTGGATTGTGAAT
GTGAAGAATAATGCTTCCTACGTGTGCGGGGCATCATTAACAAGGATATCAAAACTCGTA
TCCAAGCAGTTTAAGCCTGATTTCACGTAAATGTTTTAATTTACACCAAAGTAGTTGAGT
AAAATTTGTTAAACAATTCCAAGTTCGTGATGCTGAACCTTGAAGTATACTTCGTCGCAG
TAAAGGGCCGAACATCGATCCGAAACCGAGACAAGCGGGTTGGATCGTTGATCGCTGTTT
TTGACAGATAGCAATGGCGTCAACATACGTATTTCAAATTATAGTGTATCAAAATCAAAG
TGGCTGTTATAAATGATTGAATAATATTCTTAACTTAAAAAAATTACAAAATGGTTCAAA
AATAAATTCTGCTTCTTAAAAAAAAAACTGGGTGATTAAGATTTACCCTTTAAAAAGTTT
AGTTATACAGTAATTCAGAATCACAGTATGGTG
(2073 bp)

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