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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp33540_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_eukaryotic_translation_initiation_factor_3_subunit_C_isoform_X1_[Bombyx_mori]
Ontology
GO:0001731 P formation of translation preinitiation complex
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005852 C eukaryotic translation initiation factor 3 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0016282 C eukaryotic 43S preinitiation complex
GO:0031369 F translation initiation factor binding
GO:0033290 C eukaryotic 48S preinitiation complex
Transcript
Level		FPKM:52.79 TPM:92.07
ORF EntryO_BomoEE2160_complete:A_BomoEE_comp33540_c0_seq1
Sequence
(Nucleotide)
AAAAAACTCGCACTAAGCACACAGTTCGTAGTATTTACGGAGACTATTAATTAAAATGTG
ATAGAAAAATTCTCGTATCGTTTTTTGCTTTAGAGCAATTCTAGTCGTCTGCGCGTTCGT
CGTCGCGGCGACGGTTGCGGGTGCGTCGGTTCCAGCCCTCACGCGGCCGCTCTCGCTGAC
GCCCCTCCCCGCGCTGTGCGCCGCCCCGTTGGAAGAACGAGCCTTGTTTTTCGAATATAC
GCTCATTCGAATCCACCAAATTTCCGACCTTGTCGGCAAGCTGTAGTGCCAGAGCCTGCA
TACGTGTTGGTTCGGAACGGTGCAAGATAGCACATTCGCTCGGGTCATCCAATGATGCCA
AGAGCTCCTCGTTGATGATCATTTTAGACACTAGAGAATGTACGCGTTGACGTGGTAATT
CAAACATGTCAGCGAGAGAACGCAATGACAGTGACGCGTACACGTGAGCATATGTGAACA
GATAGGTACGTAGGGACTCTTCACGTATAAGACGACCTAGCATTGCACGAACATTATCAG
CTCCGACCATTAAATCCCAAACCTTGGCATTCATTTTTTCATTCACGATGTAATTTAGGC
AAGCTCTCCAATCACCTCTGCGCATGGCCCTTGCAGCCGCCACTGCGTGCTCTCGCATCG
ACTCAGGAGGGCCGACAAGCGCCTGACGTTCACTAGCACGTAGATTTTGATAGAAAGTTT
TACTAATCATGCGACGTCGGGCATCAAATTCGTGTGCTGCCATGTACGGAATCTCAATCA
GCATCGCTGATACTAAATAGACACACTCGAGTAATTCCAGATTAATGTGCATGTGAAAAG
GCATCTGGCGTTGTTTTTCAATTTTCTCCTGCTCCTTTGAGCGCTCATGTTGACGTTGAG
GTAGTAGACCTTGAGCCAATAGCTCTTTAGGCTTTCCAGTCATCATTAACTCGGCCAAAC
AGCCATGAGCTTCTTTCACGTTACCTCGGCGAAAAGCACACAGACCTAAATTAGCCATTG
TCCGATTATACAAAATCTGTGTACTAGGATCAGAGTGTTGTACGGTCTCTTGAAGATGAG
ACATGAGTAACAAATCACGGGCTTGGAACCAGTTGTCATGCAGGGCATGGTGATAGATAT
GAGAAAGTATAGCACGAGTTCTCAGACGATCGGTCTCATCATGGGCATAAATGTATTTGC
AGTAACGTTCCATTTTCTTAATAGTTGTTTCCTCAGTAGGCGGAAGATCTTTTCGAACTG
CACGTGGATCAAATTTGTAGTACAAATGATCTATTTTTCTTAGATACGCCCTACAAATTT
CTTGAGGTGTACCATCACGTTCAACAACTTGACATACACGGTCAATGAGAGCTGAAACTC
GCACTTCATCTTTTAATCTCTCTACATACTCATTAGAATGTGGGTCACATTCTTTTAGCA
ACTTGGTAAATTCATCATCAAGTCTTTCCAGATAAGTAAGTAGACAACCGCGAACTTGGT
ATGGTGGTGTGACGAGTTGTTCATTCTCTTCAAGGATTGTCTCACTCAGAACCATATCTT
CGTGAGCCAGAAGAAGAGTTACCATGTGATCAATATTTTCAACCAGTTTTGACCAATATT
CCGGTTTCATTGCATCAGAGACTTTAGGATTATAGTCAAAGAGGGCAGCCACGATGGCCG
AGCGTAGTTTTAGTTGTAGTGCATCTCCCAAATTATGTTGAAGCGCAACAGTACGCAACT
CATGTAAAAGTTCTAACTGAGCACGACGATCAGTTCTTTTTCGACCTCTGGCTGCGCTTA
TTTCACCAAGTTTCTTCACGACAAGTGCAGCATCAATATCACTATCTTTAGCGAACATTT
TAGGCTTATCAGAAGTCGCCGCACCCTTTCTGACTGTTTCCCATTCACCACCATCATCAG
CTACGTCGCGTTTATTGATTTTACCAGACCTTTCACGTCTTTCCTCACGTTTCTTTAGTT
TAAGTTTTATTTTCTCTTCATCATCCTCTTTCTTGGTAACTTTCTTGATGAATTGTTCAC
GAATATTGGAGGTACCACGTTCCTCATCATCAGAGCTAAAACTGGAGTCAGAAGAACTAG
AAGCCCAATCCATAGAATCTGATGATTCATCATCTTCTGGTGGTGGACGAAGAAGGGGCT
CGGGTTTAGGCTTCTCTTTAATTGGTTTTTCTTCATCTTCAGACTCATCTGATGATGATG
AATCTTTACGTTCATTGTCATCGGGTAGATCAGGATCTTCACGGAACTTGGATATTTCAG
CTTCAAAATCTTTAGTGTACTTCCTAAGTTTCTGTCTTAGTGAGGTAAGAGCTTTACTGT
TTCCTTTTGATAGAGCTTTTCGGGCTTCACGTTCATTCCATGCTCCTACTACCCAATCGT
CCAATTCTACAAGAGCTCTTATGAAGAATCTAGGAGCAACTCCATTCTCCTCCTTTTGAA
CAACCGGTGCGGCTCGAGTGTATGCCTTTTGGAGCTCTTCGAAAGAAGCTAATGCTGAAC
TAAAATCCTTGATTTTCCGATGATTGCGTATAGAGTGTATAATTCCTTCTAATTCCTCAT
AACGCTTCTCTTTCATTGAGCGCACAACTCGCTTTGTTTCTTCCTCATCGTCACTAAACG
TGTAAACTGGCGCGGGGGCGCGTACTACTGGCTCGTCCTCGCTGCTGCTCTCTGACTCCG
AGTCCGTCCCAGTTGCAAAGAAACGACTCATATTTACAAGAGTTAGTTAATGCTTTGTCT
TATATTAAAAACAGAGTAGGTATTCAGTTTTCAAGCAATCCTCTGATGATAGACTTAATA
AATTTGTAGCGAATAGAAAGAAAGCTCTCAAATACAGACCTTGCCCACGACTCACTTCAT
ACGTCAAACGCATCAAAGTTGATCAAAGAGCTAAACTTTGTTTCAATTGTTCAATTGGAA
AGGCAAAGGGAACGTGGCATATTGACTTTTTTTGTTCAATTAGACAGACACTTAAAAAAA
TCGTTTTATTTGGCTACATCCCTTTGCTCGTCGTATCAGATAAATTAAACCTAAAATAAA
CATTTATGGTACATACCTACCATAATAATTGTGTATTATCTGTGCTTACCACCCCCATAA
TTTCAAGTGCATTCTTTTTGAACATCACCAATAAAGTAACGAGAACACACCTACGTAGTA
AATTACATTTTAAGCAATGTCTGGGCATAAATATTTCACAAATCCGAACAACCTATTCGA
AAATGACGACGTCGATGATAACGAATTTGTAGATCGCTTCCGGTCAAGAATACCTCAAAC
ACAGCAAGCAAATAAGCCTTATGGAGGTCATATTGCAGAACTGGAACGTCAACGCCAAGC
TATGATCCAAACACAAAGAGAAATCGAACAACGGACAATAGATTCATCAACGAGAAGTAT
CGGATTGCTTCGTGATTCTGAACAAATTGGTATTGCAACGGCCGAAGAGCTTTCCCGACA
ACGTGAACAGCTACAGAACACAGACAGGCGACTTGATGAGATTAACACCAATTTAAACTA
TAGTCAAAAACATTTAAATGGTATAAAGTCTGTATTTTATGGTCTGAAGAATTATATTTC
CGGAAAAAGTGATCAAACACCATCTAAAAGTCCAGCGACCTCGAATGTACGTAATGCTGG
TACAAGTAGTAGCAGGCTTGATGAAACCCTAGATAATATGTCTAGGAACGTTGAAGATCG
CTTTGAGAGTCATCCCTCAGCACGCCTACATGGTTTGTCTCAAGAAAGCGCTAAGAGTCC
TGAAACAGAAAACGAGAGAGTAAATAATATACTTGATTCGAACTTGGATGAAATGGTGCA
TGCTATATCCCGGCTCAAACATCTAGGAGTTGCACTTGGTGAAGAGATAGAACAGCAAAA
CAACCTCGTGGATACTATTCAAGACAAAGTTGAGATTGCAGATATCAAGATTGGTAAACA
AAATAAACAAATGAATAAACTACTTGGGAAATAGCAATAATTATAGCAAATTAAAGATTT
ATTTTAAACAACAACTAAAAGGGTCTATTAATCTATTAAATGTATCTGTTTATAAAGATT
TAGCATGTTTTTAATGTGAGTGGTTTGCAAAATTCAGTAGTGTAATCATTTTGTGTGATA
AGGAATACTAATGTATGGCAAAGTTTGATAAGATTATTTTTTATTTGAATCACATGACCA
GCAGCAATTTGATAAACAACATGGTGTAAAAAGGGGATTTCATAGTAAAGGAAAAATCCA
TATATAATAAACCTACTAGTAATGTAAATTGTCTGAAAGGCTTCTTACTGCATACTAATG
CTCTATACATTCGTCACCACTGCTGAGCTGACTGGCATTTTTATAAAGCTTCATAGTATG
TAATAATGGTTCTTGTGTGATACTGTCCATTGTTAGCTGATCATGTACACTTAGTTACAT
CTAATAAAATGGTGTATGATTCATATTATTTAGGTAAACCTTTTCTGTATCATATTCGAT
CATCATAACCTTCATTCATTCTTCATAACTTTATTGTGCACAGTATATAGTAAAAAAAAT
TATCTTGTAATCTTTAAATAAATGTGTTATCTTTTTGGCTAGCAACTTATCATGACAAAT
TTCTTCTATTTGTTTCTAATTGTTGTTCATGCAATTAGAGACAGTTACAGTATAATAGCT
AGGTTTCACTATTTTAAGATAAAGTTTTAAGTACACTTAAATATATATAAATAAGACTTG
TGTGCAAATAAAACAATATTAGGGCAAAACAACCAATATAAGGTGAGTACTTACTTTAAG
TACCTATGTTCTATTAACTAATCCAAATTTTAAATGGGTGAAAGTTCCAGACACCTCATC
ATGAATTATGTTCTTGCATCATAAAGTAAGGTACATACATACTAATATTGTTATCAATGA
GTTAATGTTTGCCATTAACAATAATTTCATTTATATCCAAGAACCTAGCGATAAGTGTAA
ACAGTCATTATTATTATATATACTTATTTTATATTGTTTCCATTAATAAATATATTTCAA
ATCACAAATGCTTTATTTTCTTTAGTTTTTTAAATTCTAGATAGTAATTTACATATTTGC
ATCAAATACTTGTTCGAAGAAAGTATTATCAACAACAGTTTCCAATATCATGTCATTGGC
ATCAACATTATGAGTTTTTATATGTTTTTGAAGAACTCTTTTATTTGACAGTTTCTTCCC
GCATATATTGCAATGGAGCTCCACAGTGGCATGAGATTCCATATGCATTTTTAAGCCTGA
GGCTGTTGCAAAACCTTTGAAACAAGTTGTGCATTTGTGCTGTCTCTCTGTCGTGTGAGT
GTGTGCAAAATGCACCAACAATGAATGTTTGGTGGCAAAGCTTCTTTCACAGTCTTTATT
GGAACATTTAAATGGTTTTGGTCTCTGTTGGCCAGTATGAACTATGCTATGTTCCCGTAA
ATAAATAGCTCTGGTGTAAGCTTTAGGGCAACTAGGGCAAGCAAACTGTTTTACTCCAGT
ATGACTTTTCATGTGCATGACTAGAGTTGATTTTGCTGTAAATCGTTTTCCACATGTAAC
ACATACAAACAGTTTACTGTTGCTCGAATGAGCGACTCGAAAGTGCTCTTTCAATGACTG
CCTTGATTTATAGGTTTTGTTGCAAAAACCACATTTGAACTGAGCAATATCTCTGTGGCT
CAAGAGATGTTGGCGTAAGCATCCAGAGTTGTGAAATGTTTTGCCACATTTGGAACACAA
GAAGCTTTTCACATTAGCATGCTTAGTCATGTGATACCTTAAACCATATATTCTTGTAAA
TGACTTAGAGCAAACTGTACATGTGTATTTTTTTTCACTTTCTTTTTTAGGCGGTTGTTC
AGTTGATTTAATTACAGTAACAGGAGGTAAAGGCGTTAACTCTTTAGATGAGAATGGTTC
AAAGTCTAATGAAGCATGGTTATTGAAAAGTGGAATATCATATTCATGATCTTGATAAAC
AACATTAATATCAATATTTTCTATTTCAGTCCTGTGAAGATTAGTCAGAGATTGCATCAT
AAGCATTTGAGATAAGGTTGCATTAGCTTTTAGACAGTTTAATTTGAAATTGTAGGAATG
CAAAGCTGTAGAAACACACGACGAACATATTCCTTGTGGCCAATTCTCTTCGTCATTATT
CTCTAAACAGTTCAGGAAAACTAAAACATCGATCAGTTTAACCTTACTCATTTCGTGTTC
TACTAAGTCCTGAACATTCATAAACATTGTAGAATCAGATTCTGTTAAGCAAGTCCGACA
TATGTTTTTTGACAAAGGTATTATTAGACTTGTGAATTCCATCATTAATGGTAGGTACTA
AAAATCAAACGGAAATTTATCAAAAACATCAACCATATTTTTCACAGCAAAATTCACATC
AATTAAATAAATTAGTGCAGTCTATGTCCATAGATTATACACTTAATATAT
(6471 bp)

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