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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp33506_c0_seq2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		acinus_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0016887 F ATP hydrolysis activity
GO:0019899 F enzyme binding
GO:0030218 P erythrocyte differentiation
GO:0030263 P apoptotic chromosome condensation
GO:0035145 C exon-exon junction complex
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0045657 P positive regulation of monocyte differentiation
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0061574 C ASAP complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:65.49 TPM:114.22
ORF EntryO_BomoEE2115_complete:A_BomoEE_comp33506_c0_seq2
Sequence
(Nucleotide)
GGTCTTAGTTACCAGGTCATAAAACTCTTTAAAAAGAAATGATACTTTTTCAAAATGGTG
GGTTTCTTGTAAATTGTCGTGTGCTCTTTATGTGTTATTGTGAATTCGTGCTATTGTAAA
CAGTGAATTTTGTAGACGAAAGCGTGAGGATGCGTCGGAAAAGTGAGCGTACCGCCAGTA
AGAAGGCAAAGGCCTCTCCTGAAGTAAAAGTTGAAAAAGCAAAGAAAACAAGAACGCGAC
GTAGAAAACAATCTTCTTCATCAGAAAATGATTCTCCAGATGAAGCAAGTCCAGTGCGTG
TAGCTGTACCCGTGGCGGAAGAGGAACGTAAACCACCACAAACTCCCGCCAAAGGGGAAA
ATGTGGACGAGTCTCCGGATCAAGTTTGGCAGGTTAAAACTGCTGAGGGATCAGGTGATG
GTGGAGAAATACAAAAACTCAAAATTTGCTTAACACGTCCGCCATCTACACCAGAACGTG
CTGAAAGATCGCCGCGTCAAAAAAGGAAACACTCGCGAGCTACTAGTTCTAGTGATAACC
CTAGTGATACATCGGAAGAAAAGAAAAAAAATAAACACCGTTCTAAAAGATCTTTTCGAG
ATAAAGATGGCACTGACAAAAATCAAGACAGCCAAGAAGAAGACCAAGACGCTGAAAATG
AAGATAAAGAGAAAAGTGATCATGAAGTATCTCAAAGTGAAACAGAGGCCAAAGTAGAGA
CTTCTGTGTCTACAACAAATAAAGAAAATAAATCAATTGAAGAATCATCCGAAGATGCTT
CAAGCAGTATAAAATCTAGTAATGTCGTAGAAATTTGTGCTTCTGTACAGGACGATCCTG
TTGCTGATACAACTGTTGGATCACCCAGACCTGAAACAAATGCTTCACTCAAACTTGACT
CAGTATCAGCTGCGGCCGCTGAAACAACTGAAGTAAACAATGAAAATACTGATGAATCCA
TAAATGATGAAAAAACAGAGATAACAAATGAAGACAAAACTGTTGAAACAACAAATGCTG
AGTCTGTTACTGAAAATAATGAATCAACATTAGATACCTTAAAGGATGAAACTGTTTTAA
TTGAAAAGGAGGAAACAACTGTTGTAACTACCAAAGACACATCTCAAACAGAGATAAATG
AAACTGAATCCAATGACAATAAGTCAACCAGCAGGGAAAGAAGTGATTCTGTTGATAAAT
CAGAGGTATTAGAATTACATCCAGAAGAATCAAAAATGGAAATACAAGATGTGGAGATAA
GTAAATCAAAGGATATTGAAACCAGTGAGGAATTAGAAGTAACTGTGGATCATAATGCTG
AGGTAAGTATTAAAAAGGGACAAACAGACAGCAATGAACCAGAGACAAACACTGGAAATG
CAAAAGTTATTAATGAATCTGATGTTGTAGAGAAATCCAGAAAAACTTCAACAGATTCTG
GACAAAGCAATGAAGTGACCAAATGCAATAATGGGAAATATTCATCAAACAATAATAGCA
GCAATAGGAAAGATCTAGGACAGTCAGATGAAACAACAACATCTCAAAGTGAAATTGTAC
CAAATGGTCAAATTGTTCCAATTGTTGTAAATAGGAAAAGAAAATGGGGATCTAGACCAA
GTAAACTAACAACACAGAAGTCAATCACTATATCAACTGATGTGTTGAAGGATATCATAC
CAAATGTTAAACCTGTTGAATTTGATGAAGTTATTGAAGAGAAGAAACATAAAAGAATAG
AAGTTAAAGAGAAAATTGATCGGCCTGTCTTGCCCAAAATTGTTATAGATAATTCAGAAA
ATGTTGAACAAAAGAAAAAAGATGAAAGAAAAGAGAATGACAAAGACAAAGAAAACGTTA
AACTAAAGGAAATTAACTCCAATAGAAAAATATCGATTATCAAAGAAAAAGACAGTATAA
TTGCAAGACCGCCCAGTCCACCAAGGCACAAACAGTCAAATATACTCTTTATCACCAATT
TAGTCAGGCCATTTACACTATTGCAACTCAAAAACTTACTGCAAAGAACTGGCAGGATAG
AGGAAAATGGGTTTTGGATAGATAAAATAAAATCTAAATGCTATGTGAAATATGAAACTG
AAGATCAAGCTGTTGAAACAAGACATGCCTTGCATGGGGTGACATGGCCTGTATCAAATC
CAAAGACTTTACATGTGGACTTTTCAACAACAGAAGCATTTGACAAAGCATTATCCAGTG
AGGAAGCAGAGAGTGCTCCACCTTCGGCAATTCCAGGAACAGTTGAGGATTGGCTTCGGG
AGCAAGATCTGAAAAGAGAGGCAGAAGTGGAAAAGTCATGGGAGCGTAAAGGAACTATGA
GGGAGTGGGATGTAGGCAAAAATGATAAAGACAAAGAGAGAGACAAGTTGCGACGTGAAG
AGCGTCCATCTGAGAAAAGACGACATCGGACCCCAGAAAGGAGCCCCGAACCAGCGAGAA
AATTCAAAAAGAAAGAAGAAGAGGCTCCTGCAAAATTACTTGATGATTTATTTAGAAAAA
CAAAAACAACTCCATGTATTTACTGGTTGCCACTGTCTGCTGAAACGATTGCAATAAAGG
AAGAGCAACGTCGCCAGCACATGGCCGAGTATGAACGTCGCTTACTAGAGCAACGTCGGC
CGCCGCCCCACCGACGTCATTAGCATGGTCCGTCCTGCATACATTCATTGAACATTTACA
TAATCACACCACTTATCAAACATAACACTCACACATTTCATATTAAAACACAGTGACACT
TCACAAGCTCATACTCATCTAATATAACTGTCGATCTTCGACATTTTTCTTTCAGGTAGC
ATTTTCTTAAGAAGTACTTTTTTAATTACTGTGTTAACTAATAATAGCATATGAATTAGG
TTCAAGTGCACAGGAAACTCGAATGGATTTTAAATTGTAAAAAAAAGATATCAGTCATCG
TCTGAATTTATTTTATACACAATGTTATAGAAAGGCAAGCTTGGAGGGAAAGCTATGATT
TAATTCGTCGGAGTACCGCGGTCACTAACACGATGCCGGGGGATATGAAGCTCGGCTCTG
AGGATGTGCGCGGGTCCTACGCTGACTTGATGATTGTCACAACGAGATATTGGCGATACT
TGTAGACGTCTTGGGACGTTGTCGATTAGTTGTTGCTAAGCAAAGTTGAACTGACTTGCT
GGAATTTTATGACCGGCGATAAATGTGCGAGCGATAAATGTGACGAGAATGGAGCCGTAA
TTAAAAATGCTCAAGTCAATAAGTCTATCGTGAACTAGTTAAACGAGGGCGCCGTTTACA
GTATATTTCCAGAGAAACAAAAGAATACAGGAGGCATGTTTGATGTCTGTCTAATGATTA
GTCTAGAAAGCTGCTCACTTGGTGGAACGCTGATCGTCATGGTTTAATCGGAAGACGTTG
AATGTTTCCTACGAATCACGCAGCTATGTGAAAATGTGTTAGATCCTTCTGTCATATAAA
TTCTGTTCTGTCCAATTATATATTCCAGTCACTGTATGTTGAATAAATACTTTTCAAACA
AAAAAAAAAAA
(3551 bp)

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