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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp33466_c0_seq2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_eukaryotic_translation_initiation_factor_4A_isoform_X1_[Bombyx_mori]
Ontology
GO:0000022 P mitotic spindle elongation
GO:0000166 F nucleotide binding
GO:0000339 F RNA cap binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0002168 P instar larval development
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003729 F mRNA binding
GO:0003743 F translation initiation factor activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007279 P pole cell formation
GO:0007446 P imaginal disc growth
GO:0009950 P dorsal/ventral axis specification
GO:0010501 P RNA secondary structure unwinding
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0016787 F hydrolase activity
GO:0017116 F single-stranded DNA helicase activity
GO:0030718 P germ-line stem cell population maintenance
GO:0043186 C P granule
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048477 P oogenesis
GO:0051297 P centrosome cycle
GO:0072686 C mitotic spindle
Transcript
Level		FPKM:44.27 TPM:77.21
ORF EntryO_BomoEE2087_complete:A_BomoEE_comp33466_c0_seq2
Sequence
(Nucleotide)
CAATTGTCTATGACTCACTTCCGGTACTAAAATTCTCAAATAAAAGTATTTAGTCATAGT
TTGAAGAATCTACACATTACCGTTTCTTAAATCATTTTAAAAATTAAATAAAAAATTATT
AAATTTTTTGTCTACAATATAAATTAGGACAAACAGTGTTCTGTAAAATTTATGTAAAAA
GCTCCTGTTAGCTCAACTTGACCTTGCTAGTTCTTTTCCGTTCAGCTACTGCGGTTGAAA
CATGTCTTATTCGTCTGAAAGAAGGTCAGAAGATTGGCCAGAGGATTCCAAAAATGGGCC
ATCGAAGGATCAAGGTAGTTACGATGGACCTCCGGGAATGGACCCTGGGACACTTGACAC
CGACTGGGATCAAGTTGTCGAAACCTTCGATGACATGAACCTCAAAGAAGAATTGTTGAG
AGGCATATACGCCTATGGTTTTGAAAAACCTTCTGCAATCCAGCAACGCGCAATAATGCC
TTGCATCCAAGGACGCGATGTTATCGCTCAAGCCCAGTCAGGAACTGGAAAAACTGCTAC
TTTCTCTATATCGATTCTACAACAAATCGATACAAGCATTCGTGAATGTCAAGCTTTGAT
CCTGGCTCCCACAAGAGAGCTGGCCCAACAAATTCAGAAGGTGGTGATAGCTCTTGGTGA
TCACTTGAATGCTAAATGCCATGCTTGCATTGGTGGCACCAATGTCCGTGAAGATATTCG
CCAACTGGAGAGTGGTGTTCATGTGGTGGTGGGCACTCCAGGTCGTGTATATGATATGAT
AACTCGTCGTGCGCTTCATGCCAACACCATCAAACTTTTTGTTCTTGATGAAGCTGATGA
AATGTTGTCCAGAGGTTTCAAGGACCAGATCCATGATGTCTTCAAGATGTTGTCAGCTGA
TGTTCAAGTCATATTACTCTCTGCTACCATGCCTGATGATGTATTGGAAGTATCTCGATG
CTTTATGAGAGATCCTGTACGCATACTTGTACAGAAGGAAGAGCTTACCCTGGAAGGTAT
TAAACAATTTTACATTGCAATTGAATTAGAAGAATGGAAGCTGGAAACTCTGTGTGACCT
GTATGATACACTGTCTATTGCACAAGCTGTAATTTTCTGCAACACCCGTCGCAAGGTGGA
TTGGCTCACTGAATCTATGCATCTGCGTGACTTTACTGTATCTGCTATGCATGGAGACAT
GGATCAACGTGAGCGTGAAGTGATCATGAGGCAGTTTCGTACTGGCTCTTCTCGTGTCTT
GATCACCACTGATTTATTGGCACGTGGTATTGATGTACAGCAAGTTTCCTGCGTCATCAA
CTATGATCTGCCATCCAACCGTGAAAATTATATTCACAGGATTGGACGAGGTGGACGTTT
TGGTCGTAAGGGAATTGCTATCAACTTTGTGACTGAAGCTGACAGGAGAGCACTGAAGGA
TATTGAGGACTTCTACCACACTAGTATCGTTGAAATGCCCAGTGATGTGGCCAACCTCAT
CTAAGGCGCCTACATTTTTCCGATTTATATTCTGTGTCCTGCGTTCTATTGCGATATTTA
TAAGAAGATCTACCCACTGAGCCTGTGAAACGCACTTTGGATACTTCTATGTGGAAATAA
TAAATCGAAATTTCCTCTAATGATCACTGATTTTTTCAGCAGGTCCTTTTTGAATCCTGT
ACCCCTAACAATTTTTTACATTTAATTTTTGCATTTAACTTTAAATGTTGATTTTAAAAT
AATTTTATATTTCAAATGATTTATATTTTTCGAATAAATTTTGTTTAAAATGTTAATTAT
TTTTGACAGAGATAAATAATATTGGTTACATATTGTGGTTCTAACAAATAATTATACATT
AAATTTTCTCAATCTGAAAAAATGCAATAATCAAGTAATTAAAATTGTATGTAGGGAATT
TCATATTTATTAACAAGTCATTATAGAGCAACAATCATATATTCTTAAAACATGGTCACA
AATAACTGATGGGGAAATATTAGAAGTAACAAAGTCTTCTAAAAAAAAATTATTATAATA
TTTAGCTTTCACTTTTAGAAGAAATACAATGTTCAAAAATTATGTGAATATTAATACTAT
CAATAAATTAATATCACCTCTTGAAATATTCATTGTAACTATTGCCACATGAAGCATAGC
TTTAATTATGTATCATAAAAATGCAAAAAGTAGTATCAGAAGAAGAACAGCAATGGGGAA
AAATATGTAAACGGATTTTCTGGGAAGACAAACGGAAATTAGAACAGACGTATCGTCCTC
ATCGTTCCGCAATCCGCCTTTTGTTGGCACTTCTACAATAACAAGTTCGTCACTAAAAAA
CCCTATATCAAATTCACATCTTGTTTTATTGATGCACATTTTGGAACTAGAGTTATTGAC
ATATTGGAATGTAGGCTTATAAATGTCAAAAATTGCATGAATGTCGTTAAATACAATATC
GTTATCACTATAAAACATGTAATAGTAATATCCATCCACTAACACTTCATGAATAACTTT
TAAAATTGTAGTCTCTTCCAAATAGTTTGTACTATTACACTGAATTGAAAAGGGAAAATA
CTCATTCATCAATATATTATCTTGGTAGCAATCGTATAAATTTATCTCGAAACTGGATAC
AGCACTATTGTCTGGCTTGACAGTACTGTTAAACGCATTCCCGCCGTGATGTACTCCTGT
ATCAAGAATAGTATTAGGATTATGCAATTTGGTGCGTGTATCTCTTTTTTGCTGCTTTTT
ATTTGTGCCTGATGTAAATTGTGATTTCAAGTAAATATTTTCAAATTTAGGTTTTGTTTG
TATGTCTTCGTCCAACGGATCCTTGGCCTTTTCACGGTGAGTACTTCTGGCATAAATTTC
GCTCTCCTTTTTGTTATTAGGATTTTGTAATGTTACCAGTACAGTTCCTTGATTTTCGGC
TAATGAAGGTTCTTTCTTAAATTTTCGTCTGTCTAAAATACCACATGTATTCAGTATTCT
GTCACCTTTTACAACTAAGATTTTTGAGCCATCATATCTTGAACAGGCCTTGAGTTCTAC
TGTGGCGCCTTTTAACAGATAAAAACCCCAGTATTCCAAAGTGTCATCTGGCAGAGTCAT
TGATTTTTTCAGTCGAATGTGCTTTCTTTTCTCTGAAAGTTCCGGTATGCCACTCATTTG
AAAAGCATTAAAAGAAGTATTCATTTGTAGTGTGTGTTTCTCACAGAAAACTGAAGATTG
TCCTTTGTGTATTTGTATTACATCAGAATCTGATATGCGATACATAACATCAGCATATTT
AATATTTCTTAAATATAAAGGGATCACTATCAGCGTTGTAGGTAGCAGCGTAGTCAATAA
GCAAAAAATCACTACCCTACGACTACCACGCATTTTATCTCGATCTTCATCTTTGTTGAC
GTATGTATATTGATAATTTGTACTGTAGTATGATGTACTGATAGATCTTTCCGGTTTCAT
ATGCATTTTTTAGAAAAATATTTTTGTTTTGGACTTTTTAAAACTTTCTTTGTGACATCA
AATAGCGATCCTACATAAATAAAGTATCAACTTCCTACGTACCTAATGGAAAAAGATAAG
CTTATCATCTGTGTTATCGCTGTTATGTAGAAACGTAAATGTAACGTTCTAATGAGAGGA
TACATTAATATATACTTAATTGATTACTAACAAACAAAACTTTATGATAATTTAATAAAG
ATTTATCTTTTTTTCTGTACGACATAAATACAGATCCAGTTTTTAGATTAAACATAATAT
TTTATAGTTACAGCAACGGTCACACGCTGAACTTATTTAAAATATGATGCTGGGTGACAG
TTGCGTATTGATGTGTTGGCTTTATGAGGAGTTTTGTAACTTTAAATGTACCGTACTAAG
TTCTTATTGAAAACTCAGTGGCAGGGTAATGGCAACCCAGTGTGCGCTATCTTCGATGTT
CTTTCGTTACGCTACCGACGTTGCGTACCTACTTTTTAAAGATTATTTATCAGCCAAATA
TATTGCTCAGACTTAGATCTTGAAAAATAAAGTGTTATTAATATTCAGCTCTTATTTTAT
GCCGTAATTGTAATAACTAATAAATATATATTTCAGGAGTCTATTTTCAGAACTTTTGGC
AGATTTTCGGGGTATCAAGTTGTTAAACTGGATTATTTTGTTAATTTACGTGTATATTAA
TAATGTATTAATGACTATTTAGCATCTATGAAAGCATACTAATGTATACATGAATTTTTC
AAAAATCCCATTGAATTTTCAATAACTTTTTATGATTGTACTAAGATTATTATTTCATTT
CATAGTGTTCAACGCCTATGGTGAGGTACTTATGTCGATCTTATTTAAATTTAGTTTAAT
TTTTTTCATTTACCTAATTTCAACGAATAAGTTTAATGGTACAAAATTTTTGGCTGTATG
GGGTAAGCATCCTTTGTCTGGCCAAGAGATTAATGAAACAAGAAGTAGGTATTTCTAAAT
AGATAGGTAATAGGTACCTACCGTACCTACTTCATAAGAAAATGGGTAGCTAGATTGATC
TTTGCGATAGCTGTCAGTAAAATCACGCCTATGATGTCCCAAATTTTACAAAGACCTTTA
TAATATTTTTATAATAGTACAGACA
(4645 bp)

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