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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp33466_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_eukaryotic_translation_initiation_factor_4A_isoform_X1_[Bombyx_mori]
Ontology
GO:0000022 P mitotic spindle elongation
GO:0000166 F nucleotide binding
GO:0000339 F RNA cap binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0002168 P instar larval development
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003729 F mRNA binding
GO:0003743 F translation initiation factor activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007279 P pole cell formation
GO:0007446 P imaginal disc growth
GO:0009950 P dorsal/ventral axis specification
GO:0010501 P RNA secondary structure unwinding
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0016787 F hydrolase activity
GO:0017116 F single-stranded DNA helicase activity
GO:0030718 P germ-line stem cell population maintenance
GO:0043186 C P granule
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048477 P oogenesis
GO:0051297 P centrosome cycle
GO:0072686 C mitotic spindle
Transcript
Level		FPKM:132.55 TPM:231.17
ORF EntryO_BomoEE2084_complete:A_BomoEE_comp33466_c0_seq1
Sequence
(Nucleotide)
CAATTGTCTATGACTCACTTCCGGTACTAAAATTCTCAAATAAAAGTATTTAGTCATAGT
TTGAAGAATCTACACATTACCGTTTCTTAAATCATTTTAAAAATTAAATAAAAAATTATT
AAATTTTTTGTCTACAATATAAATTAGGACAAACAGTGTTCTGTAAAATTTATGTAAAAA
GCTCCTGTTAGCTCAACTTGACCTTGCTAGTTCTTTTCCGTTCAGCTACTGCGGTTGAAA
CATGTCTTATTCGTCTGAAAGAAGGTCAGAAGATTGGCCAGAGGATTCCAAAAATGGGCC
ATCGAAGGATCAAGGTAGTTACGATGGACCTCCGGGAATGGACCCTGGGACACTTGACAC
CGACTGGGATCAAGTTGTCGAAACCTTCGATGACATGAACCTCAAAGAAGAATTGTTGAG
AGGCATATACGCCTATGGTTTTGAAAAACCTTCTGCAATCCAGCAACGCGCAATAATGCC
TTGCATCCAAGGACGCGATGTTATCGCTCAAGCCCAGTCAGGAACTGGAAAAACTGCTAC
TTTCTCTATATCGATTCTACAACAAATCGATACAAGCATTCGTGAATGTCAAGCTTTGAT
CCTGGCTCCCACAAGAGAGCTGGCCCAACAAATTCAGAAGGTGGTGATAGCTCTTGGTGA
TCACTTGAATGCTAAATGCCATGCTTGCATTGGTGGCACCAATGTCCGTGAAGATATTCG
CCAACTGGAGAGTGGTGTTCATGTGGTGGTGGGCACTCCAGGTCGTGTATATGATATGAT
AACTCGTCGTGCGCTTCATGCCAACACCATCAAACTTTTTGTTCTTGATGAAGCTGATGA
AATGTTGTCCAGAGGTTTCAAGGACCAGATCCATGATGTCTTCAAGATGTTGTCAGCTGA
TGTTCAAGTCATATTACTCTCTGCTACCATGCCTGATGATGTATTGGAAGTATCTCGATG
CTTTATGAGAGATCCTGTACGCATACTTGTACAGAAGGAAGAGCTTACCCTGGAAGGTAT
TAAACAATTTTACATTGCAATTGAATTAGAAGAATGGAAGCTGGAAACTCTGTGTGACCT
GTATGATACACTGTCTATTGCACAAGCTGTAATTTTCTGCAACACCCGTCGCAAGGTGGA
TTGGCTCACTGAATCTATGCATCTGCGTGACTTTACTGTATCTGCTATGCATGGAGACAT
GGATCAACGTGAGCGTGAAGTGATCATGAGGCAGTTTCGTACTGGCTCTTCTCGTGTCTT
GATCACCACTGATTTATTGGCACGTGGTATTGATGTACAGCAAGTTTCCTGCGTCATCAA
CTATGATCTGCCATCCAACCGTGAAAATTATATTCACAGGATTGGACGAGGTGGACGTTT
TGGTCGTAAGGGAATTGCTATCAACTTTGTGACTGAAGCTGACAGGAGAGCACTGAAGGA
TATTGAGGACTTCTACCACACTAGTATCGTTGAAATGCCCAGTGATGTGGCCAACCTCAT
CTAAGGCGCCTACATTTTTCCGATTTATATTCTGTGTCCTGCGTTCTATTGCGATATTTA
TAAGGTGTGTGTATTAGGACAAGACTCCTAACTACCTAACACTGCCGAATTTTTATTGGA
ACTTATTTCATTTGGACCGATATATTCGTTTTAGTTTTAATTAATGAATACACTATACTA
TAGACGTATCAATATAAGTTTAATATACATAGGTAGGAATAAGCCCGGCTTTGCCGGATG
GCCCCCTTTCCACATAGGCCTTTTTGCCACTTGCACAGAGGTCTAATTGGGTTCTGGAGA
GGCTATTTCAATCACAAAAGTACTAGGAGGAAATAACATTGTAACTTTTCCAACTGTACA
TAATATGGTATCTGTTTTTGTAATATGCTAATAAATAAAATTAAATGCCTATCCAAATGT
ATTGTTATTGACATGTGGAAATTGTAATACTCTGTCCCTAATTGGGATTCTATTGTCTAA
ACTGTATTGAATTGTATAAATTTTGTTTTGCAGAAGATCTACCCACTGAGCCTGTGAAAC
GCACTTTGGATACTTCTATGTGGAAATAATAAATCGAAATTTCCTCTAATGATCACTGAT
TTTTTCAGCAGGTCCTTTTTGAATCCTGTACCCCTAACAATTTTTTACATTTAATTTTTG
CATTTAACTTTAAATGTTGATTTTAAAATAATTTTATATTTCAAATGATTTATATTTTTC
GAATAAATTTTGTTTAAAATGTTAATTATTTTTGACAGAGATAAATAATATTGGTTACAT
ATTGTGGTTCTAACAAATAATTATACATTAAATTTTCTCAATCTGAAAAAATGCAATAAT
CAAGTAATTAAAATTGTATGTAGGGAATTTCATATTTATTAACAAGTCATTATAGAGCAA
CAATCATATATTCTTAAAACATGGTCACAAATAACTGATGGGGAAATATTAGAAGTAACA
AAGTCTTCTAAAAAAAAATTATTATAATATTTAGCTTTCACTTTTAGAAGAAATACAATG
TTCAAAAATTATGTGAATATTAATACTATCAATAAATTAATATCACCTCTTGAAATATTC
ATTGTAACTATTGCCACATGAAGCATAGCTTTAATTATGTATCATAAAAATGCAAAAAGT
AGTATCAGAAGAAGAACAGCAATGGGGAAAAATATGTAAACGGATTTTCTGGGAAGACAA
ACGGAAATTAGAACAGACGTATCGTCCTCATCGTTCCGCAATCCGCCTTTTGTTGGCACT
TCTACAATAACAAGTTCGTCACTAAAAAACCCTATATCAAATTCACATCTTGTTTTATTG
ATGCACATTTTGGAACTAGAGTTATTGACATATTGGAATGTAGGCTTATAAATGTCAAAA
ATTGCATGAATGTCGTTAAATACAATATCGTTATCACTATAAAACATGTAATAGTAATAT
CCATCCACTAACACTTCATGAATAACTTTTAAAATTGTAGTCTCTTCCAAATAGTTTGTA
CTATTACACTGAATTGAAAAGGGAAAATACTCATTCATCAATATATTATCTTGGTAGCAA
TCGTATAAATTTATCTCGAAACTGGATACAGCACTATTGTCTGGCTTGACAGTACTGTTA
AACGCATTCCCGCCGTGATGTACTCCTGTATCAAGAATAGTATTAGGATTATGCAATTTG
GTGCGTGTATCTCTTTTTTGCTGCTTTTTATTTGTGCCTGATGTAAATTGTGATTTCAAG
TAAATATTTTCAAATTTAGGTTTTGTTTGTATGTCTTCGTCCAACGGATCCTTGGCCTTT
TCACGGTGAGTACTTCTGGCATAAATTTCGCTCTCCTTTTTGTTATTAGGATTTTGTAAT
GTTACCAGTACAGTTCCTTGATTTTCGGCTAATGAAGGTTCTTTCTTAAATTTTCGTCTG
TCTAAAATACCACATGTATTCAGTATTCTGTCACCTTTTACAACTAAGATTTTTGAGCCA
TCATATCTTGAACAGGCCTTGAGTTCTACTGTGGCGCCTTTTAACAGATAAAAACCCCAG
TATTCCAAAGTGTCATCTGGCAGAGTCATTGATTTTTTCAGTCGAATGTGCTTTCTTTTC
TCTGAAAGTTCCGGTATGCCACTCATTTGAAAAGCATTAAAAGAAGTATTCATTTGTAGT
GTGTGTTTCTCACAGAAAACTGAAGATTGTCCTTTGTGTATTTGTATTACATCAGAATCT
GATATGCGATACATAACATCAGCATATTTAATATTTCTTAAATATAAAGGGATCACTATC
AGCGTTGTAGGTAGCAGCGTAGTCAATAAGCAAAAAATCACTACCCTACGACTACCACGC
ATTTTATCTCGATCTTCATCTTTGTTGACGTATGTATATTGATAATTTGTACTGTAGTAT
GATGTACTGATAGATCTTTCCGGTTTCATATGCATTTTTTAGAAAAATATTTTTGTTTTG
GACTTTTTAAAACTTTCTTTGTGACATCAAATAGCGATCCTACATAAATAAAGTATCAAC
TTCCTACGTACCTAATGGAAAAAGATAAGCTTATCATCTGTGTTATCGCTGTTATGTAGA
AACGTAAATGTAACGTTCTAATGAGAGGATACATTAATATATACTTAATTGATTACTAAC
AAACAAAACTTTATGATAATTTAATAAAGATTTATCTTTTTTTCTGTACGACATAAATAC
AGATCCAGTTTTTAGATTAAACATAATATTTTATAGTTACAGCAACGGTCACACGCTGAA
CTTATTTAAAATATGATGCTGGGTGACAGTTGCGTATTGATGTGTTGGCTTTATGAGGAG
TTTTGTAACTTTAAATGTACCGTACTAAGTTCTTATTGAAAACTCAGTGGCAGGGTAATG
GCAACCCAGTGTGCGCTATCTTCGATGTTCTTTCGTTACGCTACCGACGTTGCGTACCTA
CTTTTTAAAGATTATTTATCAGCCAAATATATTGCTCAGACTTAGATCTTGAAAAATAAA
GTGTTATTAATATTCAGCTCTTATTTTATGCCGTAATTGTAATAACTAATAAATATATAT
TTCAGGAGTCTATTTTCAGAACTTTTGGCAGATTTTCGGGGTATCAAGTTGTTAAACTGG
ATTATTTTGTTAATTTACGTGTATATTAATAATGTATTAATGACTATTTAGCATCTATGA
AAGCATACTAATGTATACATGAATTTTTCAAAAATCCCATTGAATTTTCAATAACTTTTT
ATGATTGTACTAAGATTATTATTTCATTTCATAGTGTTCAACGCCTATGGTGAGGTACTT
ATGTCGATCTTATTTAAATTTAGTTTAATTTTTTTCATTTACCTAATTTCAACGAATAAG
TTTAATGGTACAAAATTTTTGGCTGTATGGGGTAAGCATCCTTTGTCTGGCCAAGAGATT
AATGAAACAAGAAGTAGGTATTTCTAAATAGATAGGTAATAGGTACCTACCGTACCTACT
TCATAAGAAAATGGGTAGCTAGATTGATCTTTGCGATAGCTGTCAGTAAAATCACGCCTA
TGATGTCCCAAATTTTACAAAGACCTTTATAATATTTTTATAATAGTACAGACA
(5094 bp)

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