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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp33323_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_topoisomerase_I,_mitochondrial_[Bombyx_mori]
Ontology
GO:0002168 P instar larval development
GO:0003677 F DNA binding
GO:0003916 F DNA topoisomerase activity
GO:0003917 F DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0003918 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006265 P DNA topological change
GO:0006338 P chromatin remodeling
GO:0007059 P chromosome segregation
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0016853 F isomerase activity
GO:0030261 P chromosome condensation
GO:0031298 C replication fork protection complex
GO:0045995 P regulation of embryonic development
GO:0048477 P oogenesis
Transcript
Level		FPKM:62.68 TPM:109.32
ORF EntryO_BomoEE2008_complete:A_BomoEE_comp33323_c0_seq1
Sequence
(Nucleotide)
GGCTAATGCACAAACCGTGCCGGATCCAAAAACTAAAGAAGAAACTATTGGGTGGGACTA
CTTGAACTTTTTTGGCGGGAATGCGAGAAGCGAAGCTGTGTGAATTTTGTCAATTTAGTT
TCTTAGGGTTTTGACGTGTTTTATCGGTGAATTATTAACTGTTCAATATCTCTGAAAGTG
CACTAATCACTGATGAGGGAGGGAAAGTGAAATAAATGCGCTGGACATTGGGTCTCAGGT
TCTTCCAAAAAGTGCACTGAAAAAGTCTTATAGTAATATAACCACCATTTTACCTTCTTT
ATTTATCCCATCTCCTTTTTTTGTATCATCCCAAATTTTCATATGAAAACAAAATAAGAA
AATATAAGACTTGGCTTGAAGGTCTCTTCACCAGGTTCATAAAATTGAAAAGATAAAAAT
ATGAGTGATTGTACAAAGACTGTGAATTGTCCTATATGTAATAGAAGTTTTGAAAATACC
GAAATTGAGGAACATGTAAACAAATGTCTTTTTCTCAATTCTTGTGAAAAATCTAATTCG
AAAAGACAAGGGCAACAACTATTATCTCCAAATGAAAAAAGAAAGAAAGTTGAAAAGTTA
ACAGCTTTGCCTCCAAACTTGAAGAGTTCACAATCACAAAAAATAAGCACAAATGAAAAC
ATAAAAATACCTCTATCAGAGTCTTTAAGGCCAAAATCTCTGGACCAGATTGTTGGACAA
AAGCAATCATTTGGCACAGATTCAATGCTCCGATCGATGCTTGAACAAAACAAGATTCCT
AACATGATTTTGTGGGGTCCACCAGGCTGCGGAAAGACGTCATTAGCAAATGTTATCTCT
AATATTTGTAAAAAACAAAATAATTTAAAATTTGTAAAACTATCAGCTACTACATCTGGC
ATCAATGATGTAAAGGAAATTGTTAAAATAGCAAAAAATGATGCACAATTTAAAAACCAG
ACTATTTTATTCATGGATGAAATCCACAGGTTTAACAAACTTCAACAGGACACTTTCCTG
CCCCATGTTGAGAATGGTACAATAACTCTGATTGGAGCCACAACTGAAAATCCTTCTTTC
AGTCTCAATAATGCTCTACTTAGTAGATGCCGGGTTGTTGTCATGGACAAACTGACCACT
GAAGATGTGATGGTTATTTTAAAGAAAGCCGTTGAATACAATGAAGCAAAACTTATTAAT
ACAAAGGAAACTGTGAACAAGAGTGATGAACCTGATCAAACCATACCCAGGTATTTAATT
GAAGAAGCTTCTTTGCAATGGCTGGCAGAAATGTGTGATGGAGACGCTAGAGTCGCTTTA
AGCGCCCTTGAACTGGCGCTTAATGCTCGAGATCCGGGCTCTGATGTGCACCTGAACGGC
CCAGCAGTGTTAACACATGATGATATCAAAGATGGAATAAAGCGCTCGCACGTGGTATAC
GACAAGCACGGCGAAGAACATTACAACACGATATCTGCTATACAAAAGTGTATCCGCGCT
GGAGACGATAACGCAGCGCTTTATTGGACAGCCCGAGCGATGCACGGTGGCGAAGATCCA
TTATATATCGCGCGACGATTTGTTAGAATGGCCTGTGAAGACATAGGCTTAGCCGATCAA
TCCGCATTAGTAGAAGCAGTTGCGTGTTTTCAAGGTTGCCACCAAATAGGGATGCCCGAG
TGTGACGTCCTGTTGGCTCAGTGTGCTGTGAGATTAGCCCGGGCTCCGAAGAGTCGTGAA
GTATACAACGCACTGAAACGGTGTCAACAATCTCTAAAAGAAACTAAAGGTCCTCTCCCA
CCAGTTCCATTACATTTACGGAATGCACCGACCAAGCTAATGAAGCAAATAGGGTATGGA
AGTGGATACAATCTCCTGAGTAAGGAAGAATCTGGACTTACCTATTTGCCAGCAGGAGTT
GAAGGTGATTATTTTCAGAAGGAATACGAAGGCGATTAACATATTGAAAATAAATAAAGA
CATCGTTCCTAATGTCACTTTTTATTTAGGATAATCTCATTTCACAATTTTATGACATGG
TAAAAATTTTATATTTACAAGATGAACATATAACACACTACAGAATTGTACCTTTCATAA
TCTTATATAGCTATTGCTTTTTGTTTTATAAAAATAAAGTAACCATTACATTTTATTTTA
TTTTACATGATTCACCACTGCAGTGTTTTCTAACATCATTTGCTTTTCGATACAATATTC
TTTTAAATTAGCCTTAGTTAAGTTTTCTTCACTATTCACAATACCGAATAGTATTTTCAC
AAGCACATTCAACATTATTATTTATGCATTTGAACTTTAGTGAACTATGAGCCTCACTAA
TATTTACAATGTGTATTTACACATCACAATGACTTATTCACAACATTTTGTCATTCTTTA
TAAAAGTGACTAGCAACTTGTAATTTAATTATAAGAATTATTTTCAGATAATACTATCAT
TATGGCTAGCTAAATGTTATTTTGTAAATGAGAACAAATTTTTGACCAAGTTGCAAGTCT
TACACAAAATCTTAAAACTAGAATTCCTTGAACTATCATATTAGTCTAAATAACCTAAAA
AGGGATCGAGAACTAAGTCCAAACTAAATAAAATAATTAGAATCAGACTTCTAATTTAAA
AAAGAAGGAACAATGTTCGGATTTTTTAATACATAAACTTTACTTGAACCTTAAATACAT
CATCACATAGTAAACTTTGTAAAATGTAAGTTCATAAAACTGATTTTATACATCATTTTG
TATAATTGGGACGTTATATTCAACATATAAAAATAGAGCTGCTAATTATTCTAAAATTGA
AACTAGAAGACATAGTCTGGCCCGGCCATGTCTATTGCCCATCGGAACTTATCCCTTTGC
GTTTTGTTATATATTTTCTCAATTGGAACACCATGTTTCTTGCACCATGCTACTGAAATC
CGTGGATCCAAATAATTCAGTTTCGATGTTCCAAGGGCAATGGTTTTATTTTCATCTCTG
TCTGTTTCCTGCAGTTCCAGTTTTTTAAGTTGGTCTTTGAGACGTTCAAGTGCCTTTTTC
TTCTTATCACATGCTAATTTTTCTTTAACAGAACCTCGCTTTGCTGCTTTAGATGCTTGT
TGAAGGTCTTCTTCAGCCTCATCAATTTGATCCCGTTTAGCTTGAATTTTTTCTTTTAAA
GCCTCCATGGACTTAGAATGTCCCTTAGGTACAGCACGTTGATGGTTGCACAAGATGGCA
ACTGCACGGTTTGCTCTATTGTAAGCTAAAATCTTCTCAGGCACAGAGGCATCACCATCA
GTGAGCTCATCTAATTGTTTCTGTAGGGTAATAGAAGCATTGTATGTACGGAATACCTTG
GCAGTCAAACCTGGCATCAAGTCTTTTAAATGTTCATTTAAAGTTTGTGTGTTAAGTCTG
TCGAAGAGATCATCACTGTCCTTTTTATTCTCAATAAATATTTCGAGATTCTTAAATACA
CGTTTCTCTACTGGCACTTCATTGTAATATCTTATTGAATCTTTACCAAGGAAATCAAAC
ACTACTACATATTCTTTACCGTCCTTTTCTTTGTGTAACTGGATATGTTCTACTCTTAAT
GAACAGCAACCAACAGTGTCAGCTTGTTCATCATCTTTTTCATTACCTGCTCTAAGTGCT
AATCGATCAATGAAGTATAGTGCCACTGCTCTTTGGCGCACCTGCATCTCCTTTGCCTTC
CAATCAGCACGGTAATTTTCTCTAATTTTGTCTATACACTTATGAAGTTTTCTAGCAGTC
TCATATTTCTGCCAATCTTTTTCACCCTTCAATTTTGAACTGGGATTTAACATGACATAC
TTAGCTTGCTGCTGAACATTCTCTGTCCAAGAGGCTAACCATGTAACTGTATTATCATGT
CTTACTTCTCTCCATTTATGTCCTGAAGGTGGTTTTGGTATTTTACTATCTTTTGAGCAA
TTGATTAAGACATCTTCAGGCATAACACGTCTCTTTAATTTCCCCATTTTTGGGTGCTCA
CCTCGACCTCTAAACAACCCTGGGGGTTCTATTCGGAAGTTCCCTATCTTCTCTTTATGA
CCATCTATTGTGCAAAATCCATATTCTTTTTGTATTTCTTCATTTTTGGCTTTTAAAGCA
GCCTTTTCTTCTTTAGATCGATTTCTATTTTTTTCAGATACACTCTGAAAGTATGCATGC
ATCTCTTTGAAGTTACATTTGGACAAATCTTTAATAAGTTTAGCTTCTTCCGGAGTCATC
ACTTTCCGCCAGTCAGTTAAAAAATTGGTGTTGAAAACAGACTTGGTGGTATAATCATGT
TCCAACATGCGTGCATAAAATCCTGCTACTTCTTCAGCATCTTCAGATAGTTTCAACTCT
TTACCATCATAATAAAATTTGACATTGGAAGGCAAAGGTTCATAAGGTGGAGCAAACACA
GGGCCTTTATGTTCCAAAAATGTCCATTTTGTTCCATCATCGGTCTTCTCTTCTTCCCAC
CATTTCCAGACTTGTTCTGTTTCTGTGTCTTGTTTTTTCTTCCGTTTATTGGGACTGATA
CCATCATCTATGGGCTCAGATTTCACCTTAACTGATTTAGTTTTTTCAGAACTCTTCTTT
TTCTTTTTAGGTTTTTCATCTTCTTCATAATCATCATAATCTTCATAAGTCTCTTCTTTT
TTTACTTTTTTCTTAGATTTCTTTCTTTGTAGTAATGGAATGTCTTCTTCACCATCACTA
ACATGGCGTTTTTTAGCTTTTCGTGCAGTTAGTGGTATATCCTCTTCACTTTCATCATCT
GGAGGCAGTTCAGAAAGTGGCTCATCTTTAAATTGGGACATAGAGTAGTCACAAGATGAG
ACAGTTGTGTTAGCTCCAGCATATCCTTCATCACTATCATCTTGTTCACGTTTTAAGACT
GGTTGATCCACCTCCATAGGTTCATCTTTTATGACATTCTGAGACTCAGATTTTATCTTT
TCATTTCTTTCACTTGAACTTTTCTCCTTGTTCTTGCTGGAGCTGTTTTTATCTTTTGAA
CTGGAGTGCTTATCTTTGTCCCTATGGTGTTTATCCTTGTCACTCCTGTGTCGATCTTTA
TCTTTTTCATCTTTACTTTTAGATTTATGATCTTTATCCTTTGATGAGCTTTTGTGTTCT
TTATCTCTGGATGATGATGATGATGATGTCTTTTTGCTATCTGAACTGCTTTTATTCTTG
TCTTTTTCATCACGCCTATCTTTGTCACTTTTTGATTTTTCTCTATGTTTGTCCTTGTCA
CTGCGGTGTTTATCTTTGTCACTACGTTCTTTATCTCTGCTACTGTGATCTTTATCACTT
CTGTCTCTCTTTTCACTGTTGTGTTCTTTATCTTTGCTGGAAGATTTATGGGAGCTGCTG
TGCTCTTTACTGCTTGAGTGTTTGTCTTTGTCCTTGTCTCTGCTAGAGCTGCTGTGCTTG
GACGAGCCCTTGTGATCGCGATCTTTGTCGCGATGCTTGTCTTTGCTAGAAGATTTGTGG
CTTGATTTGTGTTTGTCAGAGCTACTGTAGCCGTTATGCATGCCGTTCACGTGTTCATTT
TTATTTCCATTTACCTTTCCAGATTCACAATCATTATCGCTGGCCGGGTTTTCGACACTC
ATTTTGCCTACGTATCACAACGTTTGTTCGAATAAGATTACATGAGGCCGGCCGAAAACG
AGCGCAAAATCTAAGTGTCCAGAAGTGACGAATGCGCATGCGTCGTTGCTCATACGATAA
AAGGGAACTTCACTCCGCTTGGTTCAATGTTCTGGTTTGTACGAACTTCAAGTTGACAGT
TCAGCTTTTTAAAAAA
(5836 bp)

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