SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp33311_c1_seq1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101735988_[Bombyx_mori]
Ontology
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005685 C U1 snRNP
GO:0005686 C U2 snRNP
GO:0006397 P mRNA processing
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0008380 P RNA splicing
GO:0022008 P neurogenesis
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:56.35 TPM:98.28
ORF EntryO_BomoEE2003_complete:A_BomoEE_comp33311_c1_seq1
Sequence
(Nucleotide)
AGGTCACAAAATTCCTTACAAAAAATTGTTGAATTAAAAAGCAGAGTCACCATAGACAAA
ATAAAGCGTCGACTTAGCGTGTGTACGATAGTTTTGCTGTAATTGTAATCTTTTTCACTC
AATTTCTCAGTTCACAAGCCCATAAAATAATACAAAATGACGTCAACAACTAAGCCACGC
TCTGAAATGACCCTAGAAGAGCTATCTAAAATCGAAGAGGAAGAGTTTAGTACCGGACCT
CTTTCCGTGCTCACGCAGTCAGTAAAGAACAACACACAAGTTCTGATAAATTGCCGTAAC
AATAAGAAACTCCTGGGTAGAGTGAAGGCTTTCGACCGGCATTGTAACATGGTATTGGAG
AATGTTAAGGAAATGTGGACTGAGGTACCGAGAACTGGCAAAGGAAAGAAGGGCAAAGCT
GTAAACAAGGACAAATTCATCTCCAAAATGTTCCTCCGCGGTGATTCTGTGATCTTAGTA
CTAAGGAATCCTCTTGCTACAGCTGCAGGGAAGTAATGCAGTAATTAGTTTAAGTATTAA
TGAATAAAATATTCAGGAAATGAATAGCTTTACTGGTTCATTCCTTAAACTGTAATAATA
CTTTTACAAAATTGGAAACTGTGTTAGTTCTATGATTCTGCAACTATATGTAATAAATAA
ACAAACTCGATATTTTAATATATTGAAATTGTATCAAGTTCACATATTGTAAGATAAAGC
TAAAAACGATCAGTTATTATAATGATGCATTAAAAGAGTCTCACCAGTATTGTTGTTAAT
ATTAGCATAAAATAACTTCATATTAGTGGCTGAACATACCAAAATTGAAAAAAAGATACT
TACTTTTGGTGCAAGTAGTAACTAACAATTTTGTAAAATATAGATGCTTTAACATTTTTA
AAGAAACATGGCAAAATTACAATGGTCAAGAAGTCCACAAACCTGTCAATAAGTTTATAA
TTTCTATAATAAACCAAAGTGTAAAAGTGTGTTTTTAAAAAAAAAAAAAAAAAGAAAGAA
GAAAAAAAAAAACGAAAACTGTCAATATCGAAGCCATTGATGAACACATGGAATATTCTC
GAGCAGGGGCGAGATCCTGCCCTCCTTCGATAAATGTCATTGATGAAAACGCTATGGATT
GCGACGAAAATAATTACGTTACCAAAATCGACAAAGTTCGAAAAAAGAAAGACATAATAA
AAGTGAAGATACTACGGCCCAGAAAAAAAAGCAGATCAAAAGAAAAATACGTCATATCGG
TAAATGAAATTAGCGAAATGTCAATCTGTACTGACAGCGGGATTAATGCCACGGAAACGG
AAGGCTTGTTTCCTCTCGATGACAGCGTGGACCTTATACATAATCATTCGGAAACTTGTC
TACACACAAATGAATGTGTAGCGGACAGCGTCGAATTTGTTGATATCTCAAATACAATTA
TTTCCTTGAACAGCGATTCTAGTCGATCACGGGATTGGATCCAGGAAATGGGATTTAAAA
ATGCCCAAAGTAGTTTTCCTAATTTAGAGACTGAAGTACAAGAAATAGAAATGGGCGTTA
ATGCAAAAGACAACGAACAAGGCATAGACTCGAGAAAAACGGATGATTATAATCTAATGG
AGAATTTAGGTCATTCCGAAAATAAGAACATTGAAATCATGAATACTAGTCTTATGACGG
AAGATTTATCTGATGAAACCCATACTCCGTCGCAACCAGAATGTCAATTTTCAAAGTGGT
TTTTATTCAGTGAAGATGATACTTCTAATGTGAACTTAGACCAATGTAGGTCAAATACTG
GCGGTTCTGGATCAAATCTTAAACAAATATTTCCTATAGCTTGTGCCATTCCCGATTTAT
CTACTATCACAGAAATGTCAAAAGAAAATGAGGATAGTCGAAAAACAAATTTAAATATAG
ATTACTTGAGTGGCGGCGACTCGACGAACCTGTTTAGTGCTTACATAGACAATTAGATTG
TACTAGTTTATATTTTTAGTGTGTAATTAGTTTAATAATTTATTTAGATGCTATATGTTT
TTTTTTTTAAATAAATGAATTAAGAAATTTTTGAATCCCAATTTCTTTTACCATTTTTTA
AGAATTTTAATTACGATTTCATAATTGATGACACAACAAAATATTAGGAGATTTTTTT
(2158 bp)

- SilkBase 1999-2023 -