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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp33230_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		LSM_Sm-like_protein_family_member_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005688 C U6 snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0030629 F U6 snRNA 3'-end binding
GO:0033962 P P-body assembly
GO:0044822 F RNA binding
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:1990726 C Lsm1-7-Pat1 complex
Transcript
Level		FPKM:13.88 TPM:24.20
ORF EntryO_BomoEE1969_complete:A_BomoEE_comp33230_c0_seq1
Sequence
(Nucleotide)
ATATATTAAAGAACTGACTGATTATTGATGTTTTATTTTATGGAAGACATCTTAATTAGA
AATAACACTTAATTGAATCACTGAATTTTTGAATACATAGTTGCACATCATTTATAGATA
ATGTGTATATTTATTTGTACCAGTATTAACTCATATTAAATCATAATCACAGATTGTGAT
ATTATTTATTATGTGCAATATAGATTGAGTGAATGTGATTGAAACACCAACTAAAGTATA
TTATCGATGATCAACTAGCTGACCATATATCGATTTGGGAACTCATAATACAGCATGACC
ATAATTTACAGAAGATACCCGGCAGCTATGCTATTTTTATTACGGTCGTGGGGTCTCCTA
ATCTAGTTATTCGATAATAGTTTTTTTCATATATTCATTAATAGGCCAAGGTTTATAAAT
GGAATTAGAAGACAACAATCATCATAATTGACTAAGCTCTTTTAATAAACGTAACATATT
TTAATATTGTTTTTAATTGTTAGCTTACCTTATATTGAATATGTGAAATTTGTTTTAATT
ACTATCCAACTGTCTCCCTCTCTTGATGTTCTAACTGTTTTTACCATAGCAAAATTAAAT
ACATTACTTTTCAAGGTTAATTGTATTTTTTTAAAACAAATTCTAATCAGAATTATTCCA
GTAGATTTGGTGCAATGCTATAATGGATAATCATACAAGCTAGCTGACAAAACAATTTAT
AATTGGCAATTCTAAATATTTTACTTAACAATTTTATATAACATTGTACAGCATAATAGT
GTACAGACACCCTTCTGTAATTTATAAACAACATCTGAGAAGTTCTCAATTTAGACTAAA
TATTTTTATCATTATTTGTGCAATCTACTTGGTGAACAATTATGTCAAGAACTTTCATTA
AGTAAAAAAAAACGAATGAGGTTTAAGTGCTAATTCGTAATTAATTATAAATATAAAAAA
TGAAAAAAAATTGTAGATTAAGAATCAAAAACTGAAGATAAGAATTTTATTACAAATAAA
GATGGTTTATTAGTTAAAGTTTTATTATACTTAAATGATATCAGTTTAAATACTAACACG
TACTGGTGGTGAAACAAGTATGACACCATCTCCTCTTACAAATAACATAGGAATAGTTCG
TTTTGTAGTTCTGTACACTTCTTCGTATGTTTCTTCGTCGATTTCAACGGTTGTTATAGT
TTCTTCGGCATCTCCTAATACCATATTCAGATGTTGATCATAGGCATGCAGTTTGCCTCT
GAGCTCTCGTTCATTACGCATTTTAACATAAATTCTCTCATCTAAGCTAAGCCTTATCAA
ATCCAAAGGTTCTTTTACGGTCATAACAGCTACATTTTCAGTATCGTCTGCCATTTCTAG
ATATTGTTATGAAAATAGCTTGTTTTATGTCTTGTTAAAGTAGTCGCTATTTTTAAATTG
TATTTTCAATGATGTCGGTTGAATGTATTAGGTTATCTTTTGGTTTTCGTGTTTCGATTT
GTACACAAAACATCCATGAATAGTGTTGTCTCGGTACTAAACTCTCTCTATTTTCAAATA
GTCGATGATTTTTTTAAAGGTTTCAATTATCGACTTTTTACGTTTTTTAATTTTACTGCT
GCTTAAATCTTGAACTTGAACCACCTTTGTGGAAATTAAATTTAAGATGAACAGTGATAT
TCACGTTACTCGCAAGCCAATATCTGCATAGCTTAAAGTCGATATCAACCGCTAAAGGCT
GAT
(1743 bp)

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