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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp33188_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_5_[Papilio_xuthus]
Ontology
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0036459 F thiol-dependent deubiquitinase
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0071108 P protein K48-linked deubiquitination
Transcript
Level		FPKM:24.23 TPM:42.27
ORF EntryO_BomoEE1958_complete:A_BomoEE_comp33188_c0_seq1
Sequence
(Nucleotide)
GGTCCTCCGCCTTCCGCATCCAAGACAGAACGCTAGTTACTAATTAATTTATAGTGATTT
GATTAATCCAGTCATATCCATACAGAAAAATAAAACAAACATTACTAAGAGAGCATACTT
TATTAATATTTTCGTTGTTTATCATTAATTCAGGAACACTATGTTTCATTAATCATGCAA
ATTGAATCACATACATAAATGAAATATCAAATACATTTTAACTTTTAACATTTGTATATT
AATTTATTACAAAGAAAGCAAAGAAATACAAAGAACAAACAAATAAATGCTATACATTTA
AGATTCACACTGGAACGAATACACTGTTAAAAATTATACCAAACATTGTAACAATGTTAA
ATCAATGATGGATGTATTTTGAAACAAACTAATGGATTTTCTAATGAGTTTCAATGATAT
TTTAAATTACCAGGTAACATACATTGTATTCATTTCTAAGACAAATATAAATTATTATTG
CTTTAGTTGCAAAGGCATACCTTAAGGCAAAAAGTTAAGCGTTGTATGTCAGTATGACAA
TATGTATACTTGACGTAATATAAAACTCTTTTAATGACAGAGGCAGTGCACACATTTGTG
CCTCTGGTAAACTTAAATTATCATTGACGAAAATAATAATTTATACCTTACTTTTTTATT
TACTAAATAAATAATACCTAATTTTGTTATTTTTGTTAAATCTCTTACATTTTCAAACAG
TCTAACAAGCCAATACGTATTTGGTTGTATATATCAATGACTCTGAAATCATAGCCTCTC
ATATAAATATAAATAACCAAGATCTTTGGGCGGATTCTCTGAGAGAGCAACCTTATTGTC
GTTGAATATGACCCATCTTCCTTCATGGAGTATGTGACACACATAATGACCAACCATTGT
AGAAGTGCCCATATGGGATATAAATGCTATCAGTTTGTATTTTTCTGGTCCGTCCCTACA
TCCAAGTGTCCTGTCAGGTCCCGGGGTGGGTTCATCCAGGTCGAGTTGATCAGCGCGACT
GAAGATCCAGTCAAGCGCTCGTGTGACGTCACCGCCCGTGGCCCCAAGCGCGCGGACTAC
CTGAGCCCGAGTGAATCCCATACTCATTATCTGCTCCACGCTTGCTTCATCAACGTTGGC
ACCCACGGCCGCATCCGAAGGCTTAGTCCCAGGCGGTTCAAACTTATGTTCAAAGTCCCA
ATCGGTCATGTGTTCCATGAGCCAGTTGGATGCGGCTTCGATACCAGAGTTGTTGGTGTA
GTACAAAGATTTCTTGCACGCTTCCACCGGGAACCCCATGTCGAGCAGTTGTGACAGTAA
TACTTCATCGTATGTAGGAGCTGGGGTGTCAGGGGATGCCTCGGGCAGCTGCTTCTCGTC
AGGCTGCAACCCTCGTCCACGGAGGCTGCTTAGATCCACCTCCCAAGGCATGTCGACAGC
CACGTCAAGTTTTGCAGGGGTCCAATCTTCTTTGATAGTAAACTTTTTAAGTTGTATCAG
GAGGTAGTCAGGAAACGTCGCTAGTCGAGTTATTTTATGTGCGGTGACTTTCTTGTTTAA
GGCACTACTGAAGAACTGCTCAATTGTCTCCTCCCTCATGAAACTCTCCAAGCAAGCTTT
AAACGGAATGTGTGGCCTCACCACCAGGGCCGGGTCTAATCTCTGACCACTGGCTTCGGC
CTGGGCCCGTCTGGCCTCGTACTGCTGGACCTGCTCCACGTTGGTAGCAGCGGAGAGGGG
CACGGGCAGCGGCAGATGATGTTCGGCTCTCGTGGTGTACCTCACGCAGTTCGACTCCGA
GCACTTGATGCGCTCCTCCACTGCGAACTTCAAGCAGTCCGCAGGGTTCGGCTTGTGGCG
GCTGTTTCGCTGTAGGAGCGTCAAGAGATGCAAGTAGAACTCGTGCGCGTCCTGCTGCCG
CTTGGTGGCGAACTCCGGGTGGTGCTTCCCGACGAGCTGCCGGTACATGTGCGGGCTCAC
CCCCAGCTGGCCCCCCTCGGGGTCCGGGGTCGAGTACCGGCCCGACAGCAGACCCACGCC
CAGCTTTGCGGTTTGAACATTAAAATCGTTGACCGGATCTTCGGGGAAGGTGGCGAATAT
CTCCGGAGCCCCCTCCACGTAGCGACGCACGAAGTCGGGCATTCGGAACATCACCTGTAC
GACGCTGTTGATGTAACAAGAGTTTCCCAAGTTGTTGAGTCCAGTGAGAGCGGGCCCGTG
CAGTGGTCTTAGATCACTTCCAGATTCTTGCAAGGTATTCCATTCTCCCGAACGCTGGTT
CAGCTCGAGCTCTAATTCCACCATAGATTTATCTGTCTTCTGCAGCTGCTGTACATTAAT
CCCAAAGTGTTTGAGGTGATCAGCGAGAAATGGGTCTTCCACCATATCATCTTCAGCGTA
CGAAAAAACATCTCCTTTTCCTTCAGCGGTAATGGTTCCCAGCTTGACAGCGAGTGGATA
GCCTGTCTCTCTGTAGTGTTCTACAGCATGATCATTCCCTCCGGTGCCATCGAAGAAGCG
ACGTCCGCAAAGTATGGACCCATCAGTCAGGTTCAACCAGAGGTTATTAGTCAGGTCACA
CTTCTCACATTTCCATCCAGATGGAGGTATACGGATACCATTGTCCAGCTGCTTGAGGTT
AACAGAGTGTACAGAAACTTCACGTTTTTCACCATCCCAGGTGCCTTGTAATGCTGCCAA
TTCTGCGATTTTGAATGGTGATTCTGCATCGATAACAGCTTGAACTGATTTCTTTACAGG
TTCTGGTAAATTAGGATCAGGCCATGGGAATGTGTGAAATCCTGGTAGCACCACCACACT
GTAATGATCAGTGTATGTAAATTTAGGTTTTCCACATTCAGGATCAAAGCCTCCCTCAAC
TCCTATGGCGAGCCTGGTGATCTTCTTCTCGGGACCATCGCCTGTTTGCTCTGGTTCAGG
GATTGGTTGTTTCTCTCTTCTGATATGTAAGAAGACGGCGTTTCCGGTTTTCTGGAAATA
CTGTTCAACGTAATTGCGCCCGAATCCCAAGAATGACACCAGGGACACATAGAGACCCGT
CTCGGATTCCGGGTTGTCAAAAGAATATACACATTCGTCTTTGTACACAAGCTGATGCGG
TCCTGGCAATTTAATTTTAGACAAATGAGACGTTAATAAGCTTAACGATGCCATATCGAT
AACGGTGCTTTAAGGATTCTATCAATAGCTAGAGAAATTTAATTTTTTTGTTAAAACTTC
TAATATTTAACCTGACACGGCGTCGCACTAAAAATACCTTCTTTACATTAAAGGCCTG
(3298 bp)

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