SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp33187_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_serine/threonine-protein_kinase_SMG1-like_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006950 P response to stress
GO:0007274 P neuromuscular synaptic transmission
GO:0016246 P RNA interference
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0018105 P peptidyl-serine phosphorylation
GO:0035195 P gene silencing by miRNA
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048489 P synaptic vesicle transport
GO:0050808 P synapse organization
Transcript
Level		FPKM:22.89 TPM:39.92
ORF EntryO_BomoEE1955_5prime_partial:A_BomoEE_comp33187_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTTACATAGCGTACACCGTTTAATAATATTATATAATTAAGCGACACATTC
ATTCACATAGCAGACGAATGCATTTAGACTAACTTTTCATAAAAATAATTTGTTTAAAAA
ATATAAATCTTGAATCATTTGGAAATATTAAAACATTAACAGTTATGGTAGCATTAAAGA
TTGTTTCTGAAAATAAACAAATTTGTGATGTTTTAGTAGAAGGGTTACTGAAATTACATT
CTGATTGTAGATATCACATAGTTACCAATAATCTTATCAGTTCCCATATAAATCACAAAT
ACAATAAGAAACAGAGCATGTATGAGAGAGAACACTCCACGGCGCACGTTGTTAGCGGAC
ATATTGTACACAGACATATTTTATTGCGAGAGTAATAAATTAACAAAATAACTTTATTAA
AAAAAAACAGCATTAAGGAATACGTGACTATTCGATCGATATTACAGGATTTTCGGAAAA
TTAACAACAAACATTTTATCACAGAATTTGTTTTCCGTTACATTTTAAGATCAGCATTGT
ACTTTATGTGTGAAGTGGTAAAGTTTGTGGGATGTGGTCGTAACGTAGCTCACCAGGAAC
GAGAAATGTTAACAAAGGAACATTACGGGCACAGTATTAGGGGCTGGACGTTAGAAATGC
ATTCGTCATCACAAACATTACGCGCCCCCGCTGGAGGGAGGACAGCAAGCCATACATATT
GTGATAACGTATTATAACATATACTACACTTAGACCCGTTCCCCGATGGATACGGATTGT
ATTGAACAACTACTGTAGCGACGCGCTCGGGGGACCGGGACTGAGCTGGACTACACTAAT
GATACCTACACGAGTAATGGTAGACGATGCGGCCTGCTCCTACTTTACGAACTTTAAGCT
TTTTGTTTAATTGAGCTCGACGATCGAACAGGCCGCAGACGCGAGGACACTACCGCTGGT
TCGGAACGAGGCTCGCCGAGAAGAACCAGCAAGAAACTCGGCGGCGGCTGGCGGGGTCGG
CGAGTGACGTCGACGTAAGTATTTCGTCGCTTTGTGCACCCACATATGACGTCATGCGCC
AGGTTACGTTTACGTGTATATTTAATATTACTGAAGAAAGTTCGCATATGTGAAGTCGAT
ATCCCAAGACCGTGCCGGGCCCGAGTCCCGTGCGGCACGAGGGCCCGGGGTCCGCAGCGC
GTCCGGCGCTTGTCATTCTCCGAGTGACGACATCGGCCGTATCATCGACCCGACGTCGAA
CGTTTTGTTTATTTCCATTAGTCGCGAGTCGGCTCGCGGCCGTCCGGAGCCGTCCGAGTA
CAAGTAATGATTGAAGGCTAGGTCGCCAGGCGCCCCCCTGCGCCCCCCACTGCGGGCGGG
GGGGCGCGCCCAGGAGCGGGACCAGGAGTGTGCTCAGTGCGAGAGCCAGTCGTCTGCGGA
TCACACCCAGGCCATCCAGCCTTCGTACATCAGGCACAGGTTTTCCGCGCTGGTGGCCTC
AGATATCAGGTGGTCCACCAGCTCGTGCGGCTGCGGCCTCCCCTCCAGCTTGAGCCGCAC
CCGGCGCCACACGCTGGCGCCCACCGCGCTCTCGCACGCGTGCTTGTTGTTGGAGGTGAC
GGCGGCCTGTCTCGTCAGCTTGCGGCCGCCCTGCTCCGTCGGCCAGTTCTCGTGGACATG
CAGTAGCGTGTGCGCCAGCGCCGGCAGCAGCTCGCGCACGCGCCGCGCGCCGCGGGACAC
G
(1741 bp)

- SilkBase 1999-2023 -