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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp33020_c0_seq1
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		PREDICTED:_RB-associated_KRAB_zinc_finger_protein_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051567 P histone H3-K9 methylation
GO:0070491 F DNA-binding transcription factor binding
Transcript
Level		FPKM:24.46 TPM:42.66
ORF EntryO_BomoEE1885_complete:A_BomoEE_comp33020_c0_seq1
Sequence
(Nucleotide)
TGGAAAAATAAAACTACTACTATTGATATTTAAACAAAGTAAGGTAAATTAATGTCAATA
AAGGAAGATGGTTTAATGTTTTCATTAAATAAGTGCAGAATATGCTTAAAATCGGGAGAA
ATCTTTATCCCAGGGATTGAAAATCTTTTAGAACAAGTTATTGAATTCGGTGGTGTGAAA
ATAACGGAAGATGATTTATTTCCTAAACATTTATGCGATTCTTGTTACTCGTTACTTAAA
GCTGCCTTACTTTTCCGACAGAAAGCGCAGAATTCGGAGAGGATTCTCAATTATAAGAAG
ATGACTCTAGATTCTGAGGTAGCCAGCAGCGATTCAAAAAGTTCAGCAGACGAGGAAGAC
TTACACAATTTTAATGAACATAGCCAAACATATAGAAAGATTCAGCCAAAGCTCCAGGTT
TGGGAAAACGACTGTAATGACAAATTTTCTGGTGATGAATCAACATCTCGTAATGGCGAT
TTCCAAATCGAAGACGAATTGGAAAGCTCTGGGTCAGAAAGAGAATATTTGGAGATAAAT
GATGACACTGATGATTTTCTGAGTACTAATGTAATGTGTGTAATAAATCAAGATAGTGAA
ATTAATTTAGTTTCTAATAAGGATAACGAAAACTATCATATAGAACAATACCAATGCGGT
ATGTGTAGTATGATTAGTGAAACCCTAGATAAGTTGGAGATACATTGTGAATTGAATCAT
AACATTAAGGTAACTGATACTATGAAATGTGATGTGTGTAAGGAAGATGTTAGTGTCGCG
ATTCAACACATACACATGAAACAACATAAAGATGAATATAAACGAAAAAGAAGAAAAGTA
GGAAAAATAGAATGTAATATTTGCAAAAAATATATTATGAAAACCTATATCAAATATCAT
ATGAAAATGCATGGTCCGGAAACAGAAAGAGCCGAAAGAAAAAAATATTGCCGTTTGTGC
CAAAAGCCAATATCGTTACACTATTTTGTCAGTCACCTGAGAAGAGTACATCAAAGAGGG
CCAAATGAGGAAAAAATAGACCAAGCGAATTTAATTAACGTTAACAAAGATTCATTTGAA
AACTGTCCAATATGTGAAAAATTGGTGCACAAATCAAAGTACAAAGAACATCTGGCTGAT
CACGGTAAGCCTCCAAAGAAATATGTATGTGAATATTGTGCAAAAGAATTTAGATATCAA
TCAGCCTTTAAAACACATCAGTTGACTCACACAGATGAGTTTAAATACCAGTGTCAGTTT
TGCCCATACAAAGCTCAATATTTAGGACTCATTAAAGTGCATGTTAGGACTCATACTGGA
GATTATAACTATAAATGTCCACATTGCCCATCAAAATTCATAACAAAGAGTAATCTCAAC
CAGCATATCCAAAGGCATAATGTTCGTGGGAATATTAAATGTCATACATGCAATAAATAT
TTCTATCGTAAAAGTAATATGGAAAAACATTACTCAACAAAACATTTGGGCGTACGTGAT
GTAATCTGTGATATGTGCGGTACAGGCTTTAGCCACAGAGATGAAATGCTAAGTCATCAA
CTTAGAATGCACAACAGGGAGAGGTTACTTCGTCGGGTTCCGACCTATCTGAGAGTAGCT
AGAGAAAAGGAAAAAGATGAAATTGACATTAAACAACAGCAGTTGCAAAAATTATGATAA
TTTTAGAAGTGATAGTAGTAAGTAGTGTTTTAATTGAACCGATTATGAGTTTTAATTATG
CTGTAAGAAGTGGAATGGAAACATGTAATACAAGATATTTTTTATTGAATTATTATTTAA
CTTTATTTTGCCTTATTCAATTCACCTTAAATTAAATTAAGTAGCTAACAATTATAATGT
AAGCTTTATCTTGTTACCACCATTGCTTAAGCGTAAGCTCGGTGAGTTTGTGACCCAAAT
AAAAATTGTCTCAACGTTATGGTCATGCAACCTATAAACCAGGGCTGTTAAAAGCATGGC
CAGTCTCATATTTGAGAGGTCAGTGGCATGTTATTAAAATTGTGTTGTGTTAGATAGAAA
ATTAAAACTCCATGTCAAGTCATTTATGCCAGATTTATCATTCAGACCATTTGCTCATTT
GACAAAGGATTGTTATGAAACCACCCAAAACTTTTGATTATTTTAAATATAACAAGTAAA
CAATCTAATGCATGTTGTTCTTTACTATATTTGTTTATTTAATAATGAACGAGAGGGCTC
TGTGCTCTTTCTTATGTTTACATTGAACTAGTAGACAAAGGTTTTTTTTATTGCTTAGAT
GGGT
(2284 bp)

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