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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp33010_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_procollagen-lysine,2-oxoglutarate_5-dioxygenase_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0001701 P in utero embryonic development
GO:0001886 P endothelial cell morphogenesis
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0008104 P protein localization
GO:0008475 F procollagen-lysine 5-dioxygenase activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0021915 P neural tube development
GO:0030199 P collagen fibril organization
GO:0030867 C rough endoplasmic reticulum membrane
GO:0031418 F L-ascorbic acid binding
GO:0032870 P cellular response to hormone stimulus
GO:0033823 F procollagen glucosyltransferase activity
GO:0042311 P vasodilation
GO:0046872 F metal ion binding
GO:0048730 P epidermis morphogenesis
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0060425 P lung morphogenesis
GO:0070062 C extracellular exosome
GO:0070831 P basement membrane assembly
Transcript
Level		FPKM:18.00 TPM:31.39
ORF EntryO_BomoEE1884_complete:A_BomoEE_comp33010_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTTAAAATTTATAACAGTTTTTTTTATTCTTATTTCATAGGAATCGCTTTG
TTACAACGCTGTCAATCTAGTACGTCACAGTATATACGTGCGATATTATCTTTGGTTTTA
CGTAAGTCTAAATGAATCGTTTACGTAATATTTATTTAAATAAAAAATATTATATATATA
GATGTGAATATATATATCACAAATATATATGATATTACAAAAACAATTTAAAAGTAGACA
TATGATTGATTAAAAAAAGTATCAAAATCTTAATTTATCTTATAATAATAATTGCATATT
GAGATTCAATAGATTGTCAGACGATTTGCAAATACTGGGTACATACTTATAATTAAACAT
TCCTTCCTACTGATTGTCGTACATGCTGTTGTCAATTATTATAAAATGCAAATCGATTAA
AGACCTAAATTCTCATATGCATTGCTTATATGTAAGTTAAAAGGCAAGATCATATGTGTC
TTGTTATGATTATGTTATAGATGGCTCCAAATCAGATACAAAAGGCCGGATCTACACTAT
TTTATCATATTTTGAGATTAAACTGAATAAAGGGATACATGATGGATGATGCAACCTTTT
CAAAAAGAAAAGAGGAAGATAGAGTCACCCTATAAAATAACTGTACATCCGACCTTTTGT
CTGTGATAGAGAGCTTTTAGCGAATAATTCATGGATCCACGAAGGAAATCATGATGTATC
GAGTTCCTTTGGTGACGAGGAGACCCTCGTGGTAGTGAGTTAGACGTCCCGGATGCATGA
GGAGCCAGCCTTTCTTAGTGTTGCGAACCGAACAATTATACCTGATGAATCTGCAGCCAC
CGCCTTCGTAGTCCACGTTAGGAGTGTTAAGAGCCAAGTTGATGGTATATGTAGAGGAAT
CGTGATGAGGTCGCAGCGATGGTTGTTCATCCGGTCGGTAACGAACAACAAAATTCATTA
TAGACGCTGGAGGATTATGATAGTATCCGGTGAAGACTAATTCTTGAAGTGGTCGTACGT
AATCCTTCAGGATCTGTAGCCAATGACGTTCCAAGCCGACTTGGCTCATGTGGATATCTC
GAGTGGGCACAGCTTCGTAGCCGCTTTCCAAACGTTTGTCATTATTGGTTCCATCGCTCC
ATTTTCCGTATGCTTCCATTATAGCGATCCACTCATCACAGAATCTATCAGACATCAAGG
GGAACCAATAAACATCAGTGCACGGCATTAAATGTTTCCGATCCTCTTCGAAGTTAGCCA
GGTATTCAGGGTGCAGATAACGGGTAGTCCATTCCATATTATTCTCGAAGAGCTGGTACA
TATCGGGATGGGTTTTTGTTATGTCATATGTTTCCGGATTAACGAGATGGCCGAAATCCT
CTTCGTTGCTCACATACATGAATATATTGAGCTCTCTGAGACTCGCGCAGAATGCCATGT
CAGAGTCGTGTCCTTCCTGTACATAAGTCACAGCTTTGGCCTTAGGCGCTCTGAACAGCG
ACATCTTCAGCAGATAGCAATTGGTAATGAAGGGCACATTCCATACTCCCTTTATAACTC
CATATACTATGTCCATATAATCTGCGGATCTCGCATAAAATCCAGCAGAGTTGAGAGCTC
CCCAGAAGTTGGACCAGGCTTTGCCAGGACGCGTTAGCATCGGCGCGATGACGTCATAGC
CAGAAGAGAGCAAATAACGTAAAACGTTACTTTCAAGACGAGACAGGCTGTCCACAGAGA
ACAGATAGTCGCATGCACTGTTGATGCATCTTTCCTTTGCAAGGTTTCTTGCTTCTGCTT
CTGAAATGAAGTCTCCAGAATTTATACGTTTTGCTGAGGCATATTCTTTAGAGTAGGCTC
CGAAAAATTTCTCCACCTCATTCTCGTGATATTCTACATTATTGTGTATAAACAAATGAA
TTTTATTCTTAGGATAATCAGTATCAATGACTTGATCTAAAAAATCTTCTAGAAATGGTG
TTGCTTGCTCTATGAATACTGCCATCATAACACTCGGTAAGTTGTCCTCCTTCAACTGAA
TCTTTTTCTCTTTACACAGCACACAGCCCTCATTCACTGACCAAGACTTAGCCAAATAGT
TTCCATAATGGTTCAGGGTATTTTTAACTGGTCCATTACCATGGACAATTAAAGGCCTTA
ATTTTGTTACCACATTTTCAATATATGGCCATTCTTCTGTAGTATTAGCCCTTAGTTGTA
CATCAGAAAGAGCTCCATTTAAGTTTTGGAAAATCTCTGATTTATGATCAAGTGTAATTT
TGAGTGATTCCCTCAAATCCTTATCAAGATATATCTTTGTGTAGTACAATTGATCATCAT
CCTTATCCTTGATTGGGTTGCTATTGATAATCTCATATATTTCTGGCAAGTAACCTATAA
ATCCACCAGAGTTCAAATATGGACTTACAACTTCAATGTTTGGATATTGAGTTGCAAGTT
TTGCATCAGGCCAACAAAATTGTTCAGCAGAAAAAAGCACACGTGTATCAGGAAAAGACT
TGAATTTCTTTACAATCTCATCTAAATTCCCCAAGAACATGACGTCATAACTGTCAGTGA
AAAGTATTATTTTCTCTTTGTTGTCAGCTTTCATCAGCTTCTCAAGCCTGTTTTTCAGAA
GAATTACTTTTTGTCCACCACCGGGGAAGTTCATGTCACCACCTGACCACTCTTCACCCT
TGCCCAATACCTCGACATCAATATTGTACACTTTGGCAGAACGTAAAAACCTCTCTAGGC
CATGGTTATCGTCAGTGGCAACAGTCAACACAACCACTTCATCTGTAGCTTGTGTATGAC
TGTTGAAAAGAATAACAAATACACATAATATTAATTGTATAAAAAGTCCCATTTTTTGAG
TGAACCACATCATAAATATAAGTTCGACCGTCCCCGAACAGCGAACTTCCGT
(2932 bp)

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