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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp32831_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		CG10993-like_protein_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000447 P endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 P endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0034462 P small-subunit processome assembly
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:19.12 TPM:33.35
ORF EntryO_BomoEE1828_complete:A_BomoEE_comp32831_c0_seq1
Sequence
(Nucleotide)
TGAACACAGAAAATGAATGTTGGTACAAGAGATGCTCTAACTGTTTTAGTTACCATAGCT
ACTCACAGCTACTCTTGTTATTTTATAGTAATAACTACAACTACATTGTAACTTTGACAG
TCGTAAATATAAAAGTATTGATTATTTTATTTTTGATAGTAGCTTACAGTCACTATTAGA
TATGTTTTGATAAGAAACCGTTAAAAACACAAATAAATTGTAAAATGAATAATCCAGACG
AAATTAAAAGACGTGTTCCGCTATACCCAGGCTTCCCAGAGTTAGCAAGATCGGATGTCA
GCATATACCCATCATACACAAAATTAGGATTGGCGTAATATGTTTTTAACAGTCGCGTGG
TTTGCCGCCATCGTTACCATTGGGCTAAAGTTGCGCAACGCAAGCAGTTTATGAAAGAAC
TACACAGCTTCGAGAAATTACAGGCCAACGCCCTAGATGGTGTTAGAGTTCATCGGGAAT
TTTCTCAGGGTATACTGTCACATGTGATACCCCCACGCAGATACATGCAGAAACTGACAA
CGGACCCTTTGACTCCTAAAGAAAGAATGCGTGTTGAAGAGATTATAAGTGGAAGAGTTA
ATTTTGGACAGAAATAAACATATGGGTTTTCTTTTCGAATATTGTAATCTTTCTTTTGTT
GCTTAGACAGTAAAGGAGATTACTCATAAAACATCGCTACATGTCAATGAAAAACATGGT
CGAAACCATATAAGCCAATTCCCATAATCAATGTGCTTTCTCGAATGTCAAAATAAAATG
GCAACCTTCAAATTATAACTCCAGTAGGTTGCTACTTAACACCAAGTGCGTTATAATAAG
CTTGTTCTCTAGTCTATCCAAATAAAGTTAAAAAAAACAAAGCGAAAGAAGCAACTTCCA
AATCACCACGTATAGTAAAATCCCTGCTGTTCATACTGAAAAATACAAAAGAAATAAAAG
TACTTTTTTGTGGACAGTGCTCAGAAAAATATGTTCAATTATTAATGATTTATACAAATT
TAGCTCTCCTGATACATTCAAACAAGCAGTCATGGGCATCATAATTGTTGCTTTGTAGGC
TGCATATGTCCTGCTAAACCAGGTGGTGACTCCGTGATATTCTTGACATTGCTGATGTCC
TTGTACTTTAAAGTGGATCAGTAAAATAAAATATATAGATTTTAGAACTTTAATTAGAAG
TTAAATTATTTTCCATGCTTTTCTTCTTTTTTATTTTTTTACTTTTTTCTACATTACTCT
GTAAATAGTGTGCTTCCTTCTTTGCCTGTGCAATTTCAGCCCTCAGCCTCTGTTTCATTG
CAGCCCTCTCGTATGCTAATCTTTCACTGAGATGAATCCATTTAAATCTAGGGATATATT
TAATGTTCCAAATCATGTCATAGTAGCGGGATTTCTTTCTTGTGCCAATTTTTGTATTGT
TTAATTTCACTGCGACTTGCTTTGCAATCTTCTTTTTTTCAAACTCAACCCACCCTTCTG
AGAATTGATTAGGAACTCTTTTGCGTTTTTCACCTGGTTTTCCAGTCGGCTGAAGATAAA
TTCGACCAACTTCTCCGAACTGACTGAATATTTCACGTATTTTGGCAACGTTCATGTAAG
GGGGAATCGTCGACAAAAATATTATACCTCGTTTTCGTGTTTTCTGTTTTAATAGTTTGT
TATCAAATTTAGATGTTCTGTCTATATTTTTATGGTTGATTTCACAATCTGTACCATTCT
CGGGTACTCTTTCTGTTTCAACATCAGGCATTTCACACGTTTTAAAGTAGGTACCAATTT
ACAAATTAGTTTTGAAAGTTTTGATACACATTATAACCTTAAATTACAGTACAAAGTAGT
TTTATTTTTCCAAAAAAAA
(1879 bp)

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