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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp32780_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101742999_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0002039 F p53 binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007599 P hemostasis
GO:0007611 P learning or memory
GO:0007626 P locomotory behavior
GO:0008270 F zinc ion binding
GO:0008298 P intracellular mRNA localization
GO:0010609 P mRNA localization resulting in posttranscriptional regulation of gene expression
GO:0030220 P platelet formation
GO:0030425 C dendrite
GO:0035855 P megakaryocyte development
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:0045600 P positive regulation of fat cell differentiation
GO:0046872 F metal ion binding
GO:0070889 P platelet alpha granule organization
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:1902164 P positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:1902166 P negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:2000765 P regulation of cytoplasmic translation
Transcript
Level		FPKM:28.80 TPM:50.22
ORF EntryO_BomoEE1802_complete:A_BomoEE_comp32780_c0_seq1
Sequence
(Nucleotide)
GTCATAAAATCCCTTAAAAAAAAGATATGTATGTAGGTACCGTATATACCGCTATTTTTA
AATTATTTTAATGTTGATTGGGTATTGATACATTGACGTTAGATCGTCGACGTTTAGATC
TATAAAAGTATTCGGTTAAAGTTTGCAGTGATATACGAAACATATGCACTATTATTCAAT
TTTGGAAGAATACGCGTTCATAGAGAGTTTAGTTCATAATGAGTTCTTCTAAATATTTCA
AGAATTATATTTTGTGTGGAATAGTAGATTTTCATTGTCTACTGTGCAAAGAAACTTTTA
ATTCCATTACAGATGTTGACAAACATTTGAGATGGGAGAAGCACAGGAAGATACTAAAAA
CCCAAACATATCTGCATAAATTTAAAAAAGACTACATTTCAAAGGTTCCCAATTACTACT
ATTGTGAAGTCTGTAATTCAACAATAATGGACATTAAAGATATTCCAGACCATATTAATA
AAGAAGCACACAGAAATAACAAATTGAATCCTGATATTATAAAAGAAAAACCAAAAGGAT
ACTATGCGATTGGTAGAGTTGTTTTAAAAGATAAAAAAATATCAGAATATATTTGGAATG
GAATTGTAAATAACAAATGTGTGATTTGTGATGTTACTTTAGATGATGATATGATCAAAC
ATTGTACATTACCTGACCATATTGTTAAACTGATTGAAACTGAAGTTGATTTTCAAAATG
AACAGGGCTATAGGAAGGTAAATTTGGAATGCTATCATTGTTTCATGTGCAACCAATTAT
TTAATCCTGAAACATTTTTTGAACACTACTGTTGCAAACCAGAAAAAACTGTTGCAACTG
TAACTAATAAGTGTAAAACCACTGGAAGAAAACTATTGAATTTAATAGCCCAAGCAAATA
AAGCACCCAGAGTAAAATCAAATTTAGGCGATATTGTTGAAGAGGAATCATCTGTGATGT
GTGAAGTTTGCAATGAAGAAATACCTTATGATTTTGAGGTATTCTTTAACCACATGCAGA
GACATAATTATGAAGCAAGTCAAATGAACCTTATACAGATAGCTGATACTGAACGGCAGG
TAATTGACCACGGAAAACTTAGGTCTGAACTGGCAGCATATGGAAGGGAACATTCTATCA
AATTAAATGCAGGTGGTAGCAAAGGATTTTGCGTTCTTTGCAGTGCGTTTTTGTCAGCAC
ACTTAAAAGTATTCAAATCTCACGTTGAGGGTGCAATACATACTGGCCATTTAGAAATAA
AAAACCACAAAAGCACAAAAAAATCAGATAATAAGTACCCTACTTTGAACAAATTTATAA
AATTTATGCTGTATTACAAAGATTTAAAGTCATTTTACATAAATACGAGCATCAGTGTGA
AGAATGACAGTTTTATGCTGATGAACAAGATTGAACATGGTCCTCATTATAAAAAGACCA
AATGTTATGCATGTGATGTGTCTATGGCATTGGGTACTGAATACCTACATTGTAGAACAG
AAGAGCATAAGAAAAATGTCATGTCTAGTACAGTAATCCTTCATGAAGATAACAATTTTG
TAAGAGAGATCAGACCAAACTTGTATCACTGTGGTTGTTGCAATTTAACATTTCCATTCA
TAAATATTTTGAAGAGGCACATCACATCTTTTAGTCACCTGGCAAAAATACGAGAATGCA
ATATTGCCAATCTATTGATAATTTTCCTCAAGAAATATGGAGTCCCTGCATATTCTGAAC
AACTCGCTATAAGCTCTAATATAGATAATTTATATATTCAAATTATGAAGTCAGTTTATG
GAAAACACATCATTTAATACTATTCTAAATTTGATCTTGTTTTCTTGAAGTGTTATTATT
AATATTCGATTAAAGTTCAATTCTTATTATTTTGTAAAATAGTAATGAGAAAAGATTCTA
GGCCATGGGCATATAGATCATGAAGACTGTAATTGTTTTGATTTATTTTGAAACTGTTGA
AGTTAAAGCCTGTAATAGTTTTGTCATAAAGATGCTCATCTTTGATACTAACATACTTTT
AAGTGGTTTTAAAAGCCTTGCAATCTGAGTTTTAATTTATATAAGAATATTGTGCGATTA
AAGTATTCATAATGGAGGTAGAATTTTTTTAAATAAAGTTTTATAAATAAAAAAAAAAAT
TAGATATTCTTATTATTATTGAACTTATGGAAATATCGAAGGATCGACTTATAATGCTTA
CAGTCTATATTTTATAATTTTGCTTTGTTAGTTACATTCGTAAGCATGTTTGAATTCTGA
ATTATCAAAAGCGTTTTACATTGAATAATGTAAGAGCCGTTGCATAATGTTATTGTTGTT
TTTTAAAGTTGTTTAAGTTAAAATGAATTTTAAATATGAGTCATTTTTGGTAACTAAAGT
AATGGTAAAGTAAGCGATATACACACATACTGAAAAAGCCCAAATTAAATTATTACTACG
TGCATATAGCTGCTAACAATAAATGTGTGCATTTGCGTAGAATTTACCTTCACAAATGCT
TTTTATTAAGATTATCAACTGCAAATAAATAAATTCTTAGTTGATTCAATTTTAAGTTTG
TATTGACGACTTTGTAACAATGGCGAAACGCACAAAAAATTGATAATTCGTTTGAGATTT
TTTAAATATGATTTTAGAATTATATTGAAGAAAAAATATATAAATAATATAAATAATTCA
CGCGAAAAACATTTTTTAATACCAATATACAGAATAAGCTTAGCTAGAATGACACGATGT
GTTTTTACCATTGTACGAATGAATGTCTTAATGTGATTCTAATAAGCTTTGGCGCGGTTT
AGAAAAATAGTTTTATAATTAAAAAAACCCTCGAAATATAGCATGTTCTCATTATTAAAA
(2880 bp)

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