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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp32713_c0_seq1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_SH3RF1,_partial_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030027 C lamellipodium
GO:0042995 C cell projection
GO:0046328 P regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:8.13 TPM:14.18
ORF EntryO_BomoEE1779_3prime_partial:A_BomoEE_comp32713_c0_seq1
Sequence
(Nucleotide)
GCCCTACCGTCGCCCGTTTCCCCCATCTCACCGTCGTCGGTCGAATGATTAAACGGCGAG
AATGGCATTTGTGCGTGAAAATAAATGAGTTTTTGTGTTAACAAGTGCATATTTCTTACG
ACAACGAATTCTCTCTGTGACCTTTAGTTCAGTAGCTCAATTGTAAAACACAAAGTGCAT
CATTATGTGCTGCTTTCGTGCGTTTTTGTGCAGGAAATTTTTGAAGTGACCTGTTCAGGG
TGGTATCCCGTGGTTTAGGTTTCGCTGCGTCGTGCAATAATGGACAGTCTTCCCGCTAAC
ATCGTTGGAATTTAAAATATTTGGTTTAAAAACGGAATGGATGAAGGTCTGTTGAACGAC
CTGCTCGAGTGCTCCGTTTGTCTGGAGCGGCTCGATACATCTTCAAGAGTTCTACCCTGC
CAACACACTTTCTGTCTTAAATGTTTAAAGGTGATAGTAGAATCACATAAAGAACTCCGT
TGTCCAGAATGTCGGATCCTGGTCGAAACGAAGGTCGAGGACTTGCCTCCGAACGTCCTC
CTCATGAGGATACTCGAGGGTATGAGGAATTCAGCCCCGAAGAAGGTGGTCGGCGTCGGA
CAGCGGATAAGAGCGGGACACCTCCAAGTACAGCAGGGATCTCTCTCAGCACGTGACGGT
AAACAGTTGCCGCCACACGCCAGAGCCGTGTACGATTACATTTCCAAGGAGCCTGGAGAT
CTGTCATTCAAGAAAGGCGAAATAATACTCTTGCAGAAGAAACTGGACGCGTTTTGGTAT
CAAGGAGAATGCTCCGGAAGAACTGGAATGTTTCCAATCACTTTTGTGCAGGTCGTCGTA
CAATTGCCGGCGGCGACGGCGCTCTGCAAAGCGCTCTACGACTTCCGAATGTCAGCCCCC
GACGAGGAAGGGTGTCTCGCTTTTGATAAAGGAGCTATAATAACGGTGCACCGTCGCGTC
GACGACAACTGGGCCGAGGGTAGACTAGAGAACCGAGTCGGCATCTTCCCTATAGCGTTC
GTTGAACTCAACCAGGCGGCCAGGCAGCTTATAAACTGCGCGCCCCTGAACCGACCCGTG
CCGCCGGTCCCGGGACACGCGCGGCCCGGACACTCCGAACACAGACATCACTCTCAGCAT
CCGCATCGCTATCAGCCAATGTCGGTCTCTACACCGGCGACGTCACAGGGCAACTACCAG
AACATGGCAACGATGACCCAATCCCACCCCAACTACCCGACAGCGATGCTGGTCCAACAG
CCGCAGACGCTGGGCCCCCACGCGGGCCTGCTCTCGACGCCGCCGCGGAACATTCTCGAA
CAGCAGTCGAAGCACGCGATAGATCTGATACACTTTAGCAACAAGGGCCACGGCGTGCTG
GGCCTGCAGAGCGTGTCCCGCATCGGCGACGTCAACTACGACAGGACGCGCGTCAAGTTC
GACTACAATTCGACTCCCGCGGACTCGACGTACCAAAACGTGCGCCCCCCCGTCTCCAAC
AACCCCAGCTCGGACTCCAGTTCCAGTATGAACACTCCGTCGGTGGGCGTCAGTTCCAAC
ACCACGCCCAACACCAGCTCTGACACGAGCACCTGTGAGAGCAACGAGCCCAGCCTGCCG
AGTTCCCCGGACAACAACACCGACCGGACCACCGCGGTCAACGGGCCCGACCCGGATCCT
GACCGACGCGAACCTTCACTAAACACCTCGATGGGAATATTGAGCCTGAACGAGAGCTCC
ACCGCAACAAACACGTCGCTCAACGTCAGCCTGCCCCCTTCAGAGAGTCCCAAACCGAAC
GCTTCGAATGAAGAGGTACAGGAAACGGAAGAAGTCAGACTAGACGCCCCGTCTTCCAGC
AAAGTAGTGATCCGATCGAGCGGGCCGGACTCCCTGCTGAACTTCGGGCTCGGTCTGCAG
GCGGCGCTGTCGCCATCTCAAGGCCAGGAGGGGAACTACGTGGTGTCGAGATCGCACAGA
GACCCTCACAGGGAGAGGGAGAAAAGACACAGTCTCACGCCCTCGACGCATTTGCAGGCC
AATCATAATACGCCGAATAGACATTCAGCGGAGATAGTGGCGACCAGTCTGCTGGACGCG
GCGCCGGTCGGGGGGCCGTGCGGG
(2124 bp)

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