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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp32554_c0_seq2
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_ADP-ribosylation_factor-like_protein_13B_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0001947 P heart looping
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007224 P smoothened signaling pathway
GO:0007264 P small GTPase mediated signal transduction
GO:0007368 P determination of left/right symmetry
GO:0009953 P dorsal/ventral pattern formation
GO:0016020 C membrane
GO:0021532 P neural tube patterning
GO:0021830 P interneuron migration from the subpallium to the cortex
GO:0021943 P formation of radial glial scaffolds
GO:0031514 C motile cilium
GO:0035058 P non-motile cilium assembly
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0060170 C ciliary membrane
GO:0070986 P left/right axis specification
GO:0072372 C cilium
Transcript
Level		FPKM:5.09 TPM:8.88
ORF EntryO_BomoEE1728_complete:A_BomoEE_comp32554_c0_seq2
Sequence
(Nucleotide)
GGGAAATGCCTTTTTTTTTTTCTTTCGCGCGCAATGAAATGTGACCGTACGCGTTAAATC
GAAGCTGGTACATAAATCGCATAAAAACTTATCAAAATATCGCCATTGGCAACCGTTCTG
TCAACATTCAAAACCAATTTTTGTTTACGAGTGACAAGTTGGCACTTAGAGGCTGTGATG
TTATTGAATCAATCAGAAAAGCAATGGGTAATTGTTTTGGATTATTTCGGCGCAGCGGCG
TTAGGCGGCAAATCGTTCTGATACTAATAGGCTTAGACAACGCGGGCAAAACGAAAACTG
TGAATAACTTAGTGGGCGATAAAGATGACAAAGTTTTACCCACAATCGGTTTTAAAGCTG
TTAATCTGGTGCATAAGGACACGCCCGTGACTATATACGATTTGGGCGGTGGGCCGAATT
TTCGACAAATATGGCCACAGTATTACAGTGAAGTGCACGGGGTTATATTTGTTATTGATT
CAAGCGATTGTTCGCGTTTGGACGAATGCAGAAGTGTGCTTGAAGATGTTTTGTCGCACG
ACAGAATATCTGGTAAACCTGTGCTTGTATTGGCCAACAAACAGGACAAGACCGGCGCCC
TAGACGACATCGACGTTGTAGAGAAACTTAACATAGAACCACTGGTCAATAGATACCGAT
GTCCGACTCTAGTCGAATCGTACACAGCTAATATCGATACAAAATCGAAAAAGCTGAAGA
TCGACCCCGGCCTCCGGAAAGGTTACCACTGGCTTCTGAACTACATAATCCGACGCTACG
GCGACATAAATTTGAGAGTACAAACCGACATCCACGCAGATCTGGAGAGACGGAAACGGA
TGCTCAACAAAGCTTCGAACACGAACTCACAGATGAGCAACAGCGACGACATCGCAACCC
AAACGGGCTTCGAAAATCCGAATTACGACTTAACGAAATCGATTAATAACACCGAGATAA
TAATCGTCAAACCGATCAATCACAATCAGAACAGCATCGATTCTACAATAACCGTTGAGA
GTATCGATAATTCGGAATCGACTAGCTGCGGTAAGCCGAAGTTGTCGCCATTATTCGGTC
GTGCCAGTAACAGCCCTGCAACGGATATCGTTAAAATTGAATTGGAGCCCAAGAGCGCGT
TCAGGAAGCTGTCGCCGATCGTGAGGAACAAAAGCGGCGGGAATCAACACATGGATTTCA
AGAATCGACCTCAGTCGAGTCCCACTTTAAAGAAGATTAAGACCGAGCCCCACAGCAAGA
ACTCTTCGATGGTCGAAGACAAATCGGACACATCGTACGTTGGCGACGGGAACCGCACCT
GGGACGGTGCAATGGTGAACCACAGCCGGGTACTAGTCAATGCTGCCGAACTAGCTCAGA
CGCAGAGGGAAGTCGTGCTTAACGATCGCGATTACACAACGAAATCGGAGGTAGCGCTGC
AGCCGCTAACATTACCCATGTCCCCCCGGCCGGCCTCCGCCTCCTTGCTGGTCAGGAGAC
AACTAGAACTGTCGGGACAGCACAAACGGAGACTCAGCTTGCGATACATGCAACGCAATA
AGACCAGCCCGGAACGTATCTCCATGCTTATATATGAACCGAGTAAGGTTCAACAGCGGC
ATTTAGACAAAGGGGACTTTGAGCACACGACAACAATTAATTGAAGATGGAACTTCGAGA
AACTTCAAATAAATTTTAACAGGGTAGATAATAATGTACAAGAATAGAAATTGTTGGAAA
AATATTGAATTTTGAAATTAAATTTGTAATTTTATATGCGAAAGATTTAGCCTGTAACTA
GCTAACTAGTCTAAGTTGCTAGAAAATTGGATGGAATAATGTCATTATTTTGATTCGAAA
ATGAAATTGATTTGCTTTTGGTTTTGAACTAACGTGCATTGTGTTCACGAGTGCTCAGAG
CTGGTGGACTACCAAGCTTCAATGGATCACTCTTAAGAATACATCTTTTCACATACAAAT
TAGTGATGGGTGTTATTGATCAGTCTCTAAAGAGAAAAGTCTTGTGAAGTAATCATAAAA
ATACAAAGTCTTGATTGTGTGGCCAAACCCGCAGCTTATACAACTTTTTTGGAGCCAAAA
GTTAAGTAAGTTATCTACCAATTCTAGAAAATATTTTTACCTTCAGACTACGACGGCCCC
ATTGCACGGGATTCCTTCGTCAATTTACGTGCCATTTAAATACTAAAACATGATAACCTA
ATTTTTTGACGTATCAAATTTGTTCCCGCCTTTTTTGGTTCAAAGTTTATTATCTCTGGT
TTCTATCTGCGTGTTTATTATTTTAATTTTTCTGTACATATGTAATACATGTTGATTAAA
GATAATGAAAAACTTGTAATGCTTTCGTTGCCCATTCGATGTTATGAGTCTAGGATATTC
TAAGTTAGAAGTTCCCATTTTCAGTTTTTCAGAAAGCTCAATGTAAGCTGTAATTCCGGG
TTGGTAATCTGTTGACAGCGTATTGACAATGTTACAACAGTATAAATCTCAAGTTACGCG
TCAATTTCATCACTTGTTATGTAAAAAATATTTACACTGAACAATAATAAATAGGTTAAG
ATCTGAAATTATAAGTCAATTTGCTTATATTTCGGGTTCTCTTTTAATTATATTTTATAA
TTGTATGAATATTGGTCTATGCAGGTGTATTTGATATATTATTATGAAAGCGTTTATGTA
ATTTTAATTAGAAAAGAATAATAATTTAGTTTTGTACTTTGCGTACTTAAGATATTTACT
TAAATAATAAATACATAATTGTATATTT
(2788 bp)

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