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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp32233_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_putative_RNA_polymerase_II_subunit_B1_CTD_phosphatase_RPAP2_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0004721 F phosphoprotein phosphatase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0008420 F RNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0009301 P snRNA transcription
GO:0016591 C RNA polymerase II, holoenzyme
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:11.65 TPM:20.32
ORF EntryO_BomoEE1603_complete:A_BomoEE_comp32233_c0_seq1
Sequence
(Nucleotide)
GAAAAATTGTACCAAAAAAAATAACTATGGTTCTGATCTGAAATAAAAATAACAATTTTA
TGAATAAAATGGAAACAAACGTGAAGCCTCCTAAAAAAAAACCTACAACAATAGAAGACC
TCACGAAAGAACAAATTCAACAAGCGATAATTAAGAAACGAGAGTGTAACTCAAAAGCGC
AACATATAGTTGAAAGTTTTCTAGAAAATAGCATAAACGAAGTTTATTTCCTCAAATGCT
TACCAGACCTAAACCAGTCTCATTTCGAAGATGTTATTGAAGAACGATCAATCATAAGTC
TATGTGGTTACCCGCTCTGCTCGAACACATTATCCAAGAAAGACATACCGAAGCAAAAAT
ACCGAATCTCCATGAAAACGAACAAAGTATATGATATTACAGTTAGAAAAAGCTTTTGCA
GTAATAGTTGTTATAAATCTGCCATGCACATTAAAAAGCAGATGCTAACAAGCCCGCTTT
GGTTTAGAGAATATGAGATAATCCCACAATTTAATTTATTACCAATGAATTCGGCAGATG
GTTGCATGGGACAGGAGATTGATGTGTCAATAATTGACAGAGTGAAAGTAGAACTTGAAA
ACAAGCCTTTCGTAGTTACCAATGGTTTTGTAAAAGCTACTCTTAGAGATATGGCATCAA
ATAATGGTAAAGATGATGTATATAATAAAGCTACTGAGGAGCAAAATGAACAAAACTTTA
AATTAAGTACAGAAAGTACTGAACTGGATGAAAAAGAAATGAAGCATAAAGACAGCGTAA
ATAAAGCATCAGAAGGGAAATCCTATATCTTAAATTCAGAATCAAATTCTGTTCAAACAC
AAAAGTATCTACAGGAAAAATCTTGTCCTGTATCAGTGAAGTCTGAAAATACTGATAAAA
TGAAAAAAGCAGTATACAATCCAATGAACATTGTCGGAGATATCATAGAAAAACCTGAGA
AGAAAATTGATTTGACTTTACTAAGTGCAAAGGATGAACAAAATAACGCAAGCTCATCTC
TATCTCAAGAAAAAAAGAAAGAGAAAAAGCCATTAGTGACTGTATTAATTGTAGAAGTGG
AAAAATGTCTAGCAGAATGGTTTACTTTAGACACATTAATTTTTCTCTATGGCGAAGAGA
AAGTGAGAGAAATGGTATCAGATAAAGAAGACAGTGTGAAAGAATATCTGAAAAATTTTA
CAAAAGGTACATTCTACAATTCCACAGCCTATGATCAATACCAAGCTTTATGCAGAAAAC
TTAATATGCTCGAATTAGAAGACAAACGTTATGATGCCAAAACAATGCAAAGGGAAATGA
AACCGCTGCCAGATTACACTATACTACAGGAAGAAAGCAAGAAAATACAATTGAAAGTAA
AGGCGTTTTTTGCTGGTCAAACTGAAATACCTGAACCAGAGCCTGAAGAAAAGAACACAC
AATCAGATGAGAACTTCACAGCTTTGCCATTAGTAGACAAGAATTCTCAAAATGCATTAC
GTAGACGAATAGTCTGTCAACATTTAAATAAGACCCTACCGGACATCTTGAGGTGCCTAG
GTTTATTAAGTTTGGCCATAAGCACAGAGGTGCGTCTTTTGGTAAACACATTCAAATTGA
AAGCAAATAATATAATGTTTAAGCCGATTCAGTGGACTATGATTACCATAATATTTATAA
AACTTCTATCATTAAGAGATGTACACTTGGCACACTTATTGGAGCAACCAATGGCATACC
AACATATTCAGTTGTTACTCTTGAGTTACAAACAAGATAATGGCTATTTAGATAGACTAA
TATTTTGGCTGACCGATGTTGATAGATTATTGAATACAAACAGTCACTGTGCTATAGAAT
GATTGTATGCATAATCTTACTGTAACATTAATGTAACTTGTGATATTTTAGATTGTAAAT
ACTTGTTTTGTTCAAAACACTTTTTTTTAATTCAAAATATTGTTGTTTTAGTTTCATGGA
ATATAAACTTGCCAGAGTAATATTTATCAATAAACTCGCAAAATTTTTATTGCATTGATA
ATGCAGAAGCTCACAACTCAGCCAGTATAAAAAAAGGGTTCGTGTACTTATGTACGCTCG
TAAGAAGTTATACTTTATTTTT
(2122 bp)

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