SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp32047_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_nuclear_pore_complex_protein_Nup153-like_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005719 C euchromatin
GO:0005813 C centrosome
GO:0006325 P chromatin organization
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006606 P protein import into nucleus
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0006999 P nuclear pore organization
GO:0007184 P regulation of SMAD protein signal transduction
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016568 P chromatin organization
GO:0017056 F structural constituent of nuclear pore
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031490 F chromatin DNA binding
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0034401 P obsolete chromatin organization involved in regulation of transcription
GO:0044613 C nuclear pore central transport channel
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051028 P mRNA transport
GO:0051298 P centrosome duplication
GO:0072686 C mitotic spindle
Transcript
Level		FPKM:8.00 TPM:13.96
ORF EntryO_BomoEE1507_complete:A_BomoEE_comp32047_c0_seq1
Sequence
(Nucleotide)
AGTTACCAGGTCATAAAATACTTTAAAAAAAATTATTTTAATGCCAGCGGATGGATAGTT
TTGGTTAATATTCTTCAAATTCATCCAATTTTGCGTTAAATTTATTATTAGTGAATTCAA
ATATAAATAAGTTTTATTGGTGGCGAGTGACATTCATGTTTTGTGATTATTACGTCCCAC
AAAGAGCCGTGAAAATTTGTTAGACCTCCCGTTGAGCACAGCATTTAATCTGACACTTTT
AACGACGCCATGTTTGTCACGTTTTTGCCAGTTATGAATAAATTTAGTCAGAAATTAGAT
CTTTAATACGATACATTGAAAGTATTCATCAGTGCTGTAAGTTGATAAAAAATGAGTATG
GTGTTTTCAAGAAGCAAGGAAAAGAGAACGCGTTCTTCTACTGGCAATTCTAACAGCTCA
TTCGTGAAAAATGTGACAGCAAGAATGTCAGGCTTATTGCCAAGTACCATTACTAAATGG
TTTAGTAGTCCTAGTACGTCAAATGCTAATGGAGCAACACCAACAGCTGATGTCACAGAC
TCTTCCACTGAAGATGAATCACCAGAAAGTCCTGTCAGCACTCAGCCTCCAGCAAAACGC
ATGCGATTTAGTACTCCTGGAAAATACAATCAATTTGGTTCTGCAGATGGGAATTCTGTG
CTGACTACAGTTGAAGCCAATTCACAATGCTCCTCAACCTTTAGCATTATACAGTCAACA
CCTGGGCGAAATACATTTCGACAAAATACTAACTTTATGTCGCCACAGACTTCTAGTACA
ATTCGTTCCATAGATGATTCCAATGTGGATAGAAAGGATACAAGTTCTTCCTCAGTATTT
AAAAAACAGCACACACTTTCAACAATTGGTCATTCTGTAGCTGTGAAGAGGAAATCTATA
TTTGAATTATCTACTAATAATAGTGAGACTGCACAAGCAAATTCTATGAAAACTGTCCAT
AAAGATAGAAATCCATCATTCAAAGCTAGTCTCCTTGGTTCGCCTTTTTACTCAGGACGA
ACCGTGTATGGGGGTGCTTCTTCATCCTACATGAATCAGCCCAATATTAAACAAAGAAAA
GTCGCTCATATAAATGAATCTCCAGCTAATGAGACAGTAACAATGAGTAATTCTGCGAGA
AAGATAATGGACCTTCTTGAACAATATTCCTCTCCATTGGCGGAAGCGAAAAGAATCCCA
CGATATCAGAAGTCACCTAGAAATGAGAGTATAAATAGTACCGCAAATACAATTAAACCA
GCTGCCTACCGAACTCAAGAACTGCACATTCCAAGTATAGCTTCAATTTTACGAGTGAAA
CAGAAATCTCGCTTAATGGACTCAACAAGTGCTGCACGACAACTTATTGCCTCACATAGT
AGTGCCGCGCCAGAGTTTAGCCCTTATCCAACAACCATTACACAAAAGGAATTAGCTGTT
AACGAACAAAACAGCAATTTGACAACAAAAGTAAAGACTAGATTAACAAGACCAAATAGA
GGCGATAAGTTCGATGATGTTTTGACTCCAGTTCAACTGCCAACAGGAGTTTTGCAAATT
GATAAAAATAATATGCCTAAATTTACCTTAGGCAAACCATTTTCCTCAACGCCCAACTTA
ATATCTACATCTACGCCTGCTGCATCAGTGAACAAATTGGTTGTAGCCCAAAATACAAAC
CCCCTTTCTGGAACCACTACAAGTTCATCTACAGCATTTCTAAGTAAACCTGATTTAGTA
ATAAGTAGCACAGAATTCAAATTTTCAAGCCCTGTAAAAGTAACTACAGAGAATTCAACA
CAAAGTGCCATACTACCCAAATTTACTTTCGGCAGTCCGGAACGCGGAGTAGATAAAGTT
ATTGCCAGCAATAAGCAAAATGACTTTCCTGTTGTAGGTGCAACAAAGGAATCATTTGCG
CAGAAAAATATTGAAAGTTCCAAGGATTCAGTTTCAGCTTGGTCTACAAAAGAGAATTTC
ATACAGAAATCTACAGACAAGGACACCACCTGGATAACAAAGGAAACTCCAGTACAGAAA
GTTAATAACAGTCTCAAAGACTCAAAACCAGAGTGGAAATGTGCTGAATGTTGGGTACAA
AACAAAGAAGATGTTGACAAGTGTGTTTGTTGTGGGGTCACACGGCCGTCAAGTGTTGTT
GGGAAAGTGACTAAGTGTTCTTGCAAGCTTAGTGACACACAAGCTCATATTGATAAATGT
GAAACATGTGAGAAATCAGAAGCAGATGCCATCAGTATAAAAAGTAATGAGATAACATGG
AAGTGTGATGATTGTCGGGCTTTGAATGAAGCAAATATAGAAAAATGTGTATGCTGTGGC
AGTGCCCATTCTAACAAACTACCCGCACCAGTTGTATCTGAGGCAAATGATAGTAGAAAA
TGGAAATGCAATGACTGTTGGGTTATGAATAAAGGAACAGCAGTTAAATGTGAATGCTGT
GGCAGTGCCAACACTAATGATACAATTTCTGAAGTGCCCCCTGAAAAAAGAAATCCAAGT
ATTTCAGATGGTGATTGGAAATGTGATGACTGTTGGATTACAAATAAGAGCAGTGTAGAA
AAATGTGCTGCTTGTGGTGGATCGAAGCCTGGCCTTAAAAATAATAATTCCTCACTTTTG
AATGTTTCAGCATCAACTATAAATCGTAATGATTTACTTTCCACTGTGAATTCACAGAAA
AATCTGACATGGGAATGCCAAAGTTGTTTGGTTAGGAACAATAATGAGAAAACATCGTGT
GTCTGCTGCGGAGCTGAGCCATCTAACAATTCAGTTCCAGAGAAAAAATCTTTTAATTTC
GGGATTAATCCAAATACTTCATTTAAGTTTGGCATTAATCCTGTTGAGCAACAAGTTAAT
CTAGTTAAGAAAACTGAGGAATCTAGTGCTGCTTTAAAGACAAATCCAGAAGTTTCTGAA
AGTAACACATTGGAAAAAATTCCAATGTTTACATTTACTTTGCCTTCTAAGAAATCTGAA
GATAAAATTGATGATGTTAAAGGAAATATTGACGCCACGAAAGTTAAGTTTTCATTTGGA
ATCCCAAAAGCTTCCACTGCATCAGAAGTAGGAGCTGGCAATTCTCATGGAGAAAAAGAC
AAACAAGAAGAAGTGACAAAAGTAAATGTCAATACTTCAATGTTTGAGAATCCTAAATTG
GGAAATGACTTGTTAAAGCCAAGTGATAATAAACCTGCGGTTGTAACTGCACTTCCAACA
GTATCTGTAAATGAGAATAAAAATACAACTACTAATTCTTTACACACACAATCTGGAGAA
AAAAGTGAAAAGGCACTGTTGAATAATACTTTCACATTCTCGGCGGGCAGTAAAAATATT
GTGACTAACATGTTTAAGAGCCCGTCTACTGTGGCTACTACTTCAATTTCCTTTGCTTTA
CCAGTACAAACGACAGTGAAATCTACGGAGGCACCAGCAACTTCGTTATTTCAACAAAAA
GGATTTAACACTCCAGCATTCAAAACTGATAGTAATGCTTCTCTATTCAAGAAGACTGAA
ACTGAAAAATCACCCTTTCAAAATTCAATTGCTTCGCCTGTATTCCAGAGTCCCACACCA
AGTTCTACATTATTCCAAAAACCAGAAAATAGCACATCTTCTATTATGTTTCCCGCAAGT
GATGTTTCTGTAGCTTCCACTGTATCATTATTTCAAAATAGTGATAATATAATAACTACG
ACATCCCAACCTGCTACGGCAAATTCCCCCGTTTTTGGTTTTACTGCTAACTCTTTTAAA
CCAGCTTCGACTGCTGTAGAGAAACCCAAATTCAACTTTACTTTGGGAAAAACTGAGAAT
TTCACCTTCGAAAATAAATTTTCTCCTATTGGAAACAACAGAAATTCGACAAGTAGCTTT
GCTTTACCTACAAGTACCATAATTCCTACTGTCAATGGTCTAACTGGAAATGCTTTAAGT
GGTGGCAGCAATATGATAGGTCCTAATAATGGCAATACAATTGGAAATACTGTTATGCCT
GTTAGCAATTCTATAGGCAGTGATGTACTTAAACCTCTAGGGTCGAGTGGTGCATTACCC
GGAAATACATTGGGAGGTGGAAATGGATTACCTGCTAGTAATACAGTATCAAGTGGATTC
TTTGGACAATCAACTCAGAATGAAAATTTGTGGGGCACTTCAAACAACACTTCTAATTTG
TTTGCAGCAAGTACGACAGCTAATCCTTTGCAAAAACCAGCTGCGTTTAATTTTGGTGCG
CCATCATCATTATCGCCATTTAATAATAATAATACGAGTTCAGTATTTGGCAGCAGTACG
CAGTCGACGCAGAATATTTTCGGAATTGCAACACAACAGAATCCTGCTAGTCAACCAAAT
CTCTTTCCTAGCCCAGCACAGAACCAAAACGCCCCCAATATCTTCGGTAGCCCTGTACCT
CCTAGCAATTCTGTGGGACTATTTGGAACAGCAAATGTCGGTTCTACACCAACTTTTGGA
AACCAGAACCAATCTATGCCATCTTTAACACCGGCACTGACACCAACCTTTAATTTCGGC
GCCTCACAAGCTCCAGGAGTTTTTGGATTTGGACAGCAACAGCAGCCGCCTCAATCTCTG
CAACAGCCGCAACTTCCTCAACAACAGCAGCAGCAACAGCAG
(4662 bp)

- SilkBase 1999-2023 -