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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp30826_c0_seq1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_thrombospondin_type-1_domain-containing_protein_4-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0001527 C microfibril
GO:0004222 F metalloendopeptidase activity
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0031012 C extracellular matrix
GO:0048251 P elastic fiber assembly
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.64 TPM:1.12
ORF EntryO_BomoEE1440_complete:A_BomoEE_comp30826_c0_seq1
Sequence
(Nucleotide)
CAAACCAATAAGCAAATTACATTAACTAATTCTAGTTTTTTTTTCTATAATTAAGAATAC
TGTAATATCTGAAAGACATAATAAATCTGAATATAATCACATTTATATAAGATATCGGGA
TTTCGAAAATAATACACATACTAATACTAAATTTATTTTATTAAAATAACGGATAAAAAT
CACGGTCGAGTCAATTTATATTATCAAATTAAATTTTCTACACTACAAAATATTTATGAA
ACATAATATTCAATCGCGTTATATTCTAAAAATGATTATGAAACTACTGATGAACGACGA
ATACCTTATTATGACAGGTAATGCTATGAAGTGCAGGAACAGTACGACGCTGCCCGCTTT
TATTCTGAAATTCATTCATAAAGTTGTGGTACCGTTCATTTACTTCATCGTAGAATGAAA
GATACTTTCACAGTCCTTTGCAGGAATTACAGCAGTTCTGCACGTAGAAGTTATAATGAC
AAAGGCGAGCTTGAACCGCCAGGAAACAGTTGTTCAGTTTATCTTCGCATTCTCTAGGTC
CGGTTTCTCTAATAATGGGAGGCCGATTACTCGAAGTAACGACTTTTTGAGATTCGATAG
TCAAATCTGGCGGTAGAGTAGAAATGGTAGGACAGCGCATTTCGCAAGATTTCTGCTCAT
GAGGTCTCGCAGTCTTGCAATCAGCTTCACCGCCCGTGCCGTTGGTTTCAGGGTGAGCAC
AGATTACTGATCTCGTTTGTAAACCTACTTCAGATGTACAGTTCCCTGTGCACTTGCCCC
AATCGCTGAAGTACCAAGTGGGAGGGCAGTCGGCGCCGCATTCCCTTACGTGATCAGGCT
TAGGGTCCTTGCATGCCGAATCACGAAGATGCCTACCGGTGCCACCGATGCACAGAACAC
CGCGAATCTGTCGTCCTTTGCACTTTGAAGTGCAACGCGACCAGTCACCAGTAAACCATT
GCCCCTCCGAAGACTCGCATGACAGGGCAGGCGAGCAGCTTCTGCTTGTTTGAGGTTCCT
TTCTTGGAGCACATCCTGAAGGATCAGTACAACGCACACCTCTTGTTTGCACGCCACCAC
CGACACACCACCCGATACACTCCGACCATTCGGTGTAAAGCCAGCCAGCTGCCGCATTAA
AACTATATTCTGGGCCGATTTCGGATTCAGTAGTATTGATGGATACGGTATAAACGGGGC
CTTCGCGGAATGTGTCGGTGAGTTCCTTGTTTCGAGTTCTCTTTGATTCAATGCGTCTTA
CCGGGCCCAAACTTAGGTCATCGCAGTTCGGGATGTTACACATTTCTGTTGTGGGTGGCT
TTGGAGGTGGACATTTGTGGTCACTTATCTTGGTAATTCCTTTAGAGTGATCCTGTACAC
ATCCTACTATCCTTGTCCGAGTAGCAGGTCCACATCGGGGACAAGGAGACCAGGAGGCTG
CCCTCCATCTTGGTGGACAGGGCACATTACCACATCGTCGTCTCCGCCCGATCGGAGGTG
AACCAGTACAATGGACCGATGATACCTCTCGATCTCCAGAGCTTGTTGATTCTACACACC
TATACTTTCCTAACTGAATTCCGCCACCACAGCTTCTTGTGCATTGGGTGAATGACAAAA
TTCTCCACATGAATTTTCTGTTGCCAATTACATTTGCATCGATGCCAGTTTCAACACTCG
TCTGTTCATTGGAAGTGCTCGGATGATCTAAATGTCTAGGTATATTCCCTGTTGCCCTGG
GATAAGCATCAAAACTGTGATGTCTCCTTGTATGTTTAGTAATAATAGCTGGTACGACAT
CTGGTATTTCTGGCCTAGCTTCATCACCTTCATCAATCGGAGAGTCCGTAAAGTATTCAT
ATTTAATGTTCGGTTTTGGTTGAGTATAAAGAATCATAATATCAATAGGATGATATATGG
GTCCATTTGCATGCACATTGTCCAGTCCAGCGGTACGGGTATAAAGAAATCTGGCTCCAG
CCGCCTCATACATTCCTGGAGCACTCACGGCAAACTCTCCATTTAATATATACGAGCTAT
TCGACAGCCTCAGGGCGATATAATTTTCGCTTGAAGCTAATTCTGTCACATTAATCCGGC
ATGCTCCCCTTGGGACGGTCGCTACAAAAGTGTAGCCCAGTGGCAGTCGAGGTTTCGAGA
ACAATCCTGAAACGAGCCTTCTTCCACATCTCAGCTCCCGAGAATTGCTGCCTGCTAATA
CAGACTCCCGTCCGATTACCTTACAAGTACCCTGCACACAAATAGCAGGGAGTCCGTCTT
GAGTACAAGGGGTGCCGTCGTCAACTATGGACAGAGTCGCGTAGAATTGTTGACCCATAG
GCCTACAATTCAAAGCACATGGCGCATTACCGTCAACATATGGAATCCATGTGTAAAACC
TTCCTCTAAATGGTCTTCTATCAAAGGAACTACATTGTTCTGCGCGCGTATTCAGAACGC
CTCCTGCACAAGGCTGTGTGTTGCACTCGTGGTATCTTCTGTCGACCCCAAGGCATCCTT
TGTTGATTTGTCTTGTAACTCGAACTGTTAGGACAGGTGTCGTTTCGTTACTGTTCACTT
GAAGATTACGAGGTCTTGGCAGGCACTGTCGCTCTTGTACTGACACACCACCGCCGCAGG
TCCTAGAGCAAGGACTCCATCGACCCCAAACGCTCCACGCGTAACCTGAACTTGAAGGTT
CCGCTGTTGTCATCTGTGTCGGCGCCATAGTTGTTGTGTTATTTGTTGTTGAATCTGTCA
TAACGATTTGCAATAGAGCAGCTATCCAAAACAAATCCCACAGAAACTGCCCGTTCTCCA
TTTTAATACACTATAAACTTTTACTGACATTAAATTTGAACTTGTCTCTAATCATTTTAA
TATACGTTAAATAAAAATGTTTATAGTTTCTGAAACGTCGTGTTTTAAAAATATGCCACT
TTTTATGTCCATAGTTTATGGCGTCACGTTACACCTTGGCTGATAATTTTCACCATATCG
TTGAGAACGATAATTTTTCATGTTTCCTTAATTAACGTGTGCCTATTAACG
(3051 bp)

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