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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp29652_c0_seq1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		Synaptotagmin-1_[Papilio_xuthus]
Ontology
GO:0005509 F calcium ion binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006906 P vesicle fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017156 P calcium-ion regulated exocytosis
GO:0017158 P regulation of calcium ion-dependent exocytosis
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0030276 F clathrin binding
GO:0030672 C synaptic vesicle membrane
GO:0031045 C dense core granule
GO:0031410 C cytoplasmic vesicle
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045202 C synapse
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0048471 C perinuclear region of cytoplasm
GO:0048488 P synaptic vesicle endocytosis
GO:0048791 P calcium ion-regulated exocytosis of neurotransmitter
GO:0055038 C recycling endosome membrane
Transcript
Level		FPKM:0.54 TPM:0.95
ORF EntryO_BomoEE1360_complete:A_BomoEE_comp29652_c0_seq1
Sequence
(Nucleotide)
GTATCCGTAAATAGATTCCCCAGCTTTAAAAAAAAGGGCTCTTTATAAAACCGTTTTAGA
GTAGATCTTTTTTGTGCGCTTTGTACACAGAAACCCCTTAAAGCAGTTCTCTCAAATGTC
TAAGTTTTGAAGTACGAACAATGGGAAGATTTTTCGTGGTATTGGACGAGGCCCATCGTG
CCCTGCAATATTCTTTCTAGAAAAAAAAAGCTCACAGTGTCCATGTGTAAACTAACGAGT
AGTGAAGTGCAGTAAGAGATGTTTTATTGTGAGTCTATCTGAGCGTGTGCCACATGGCGA
CGGCCTTGCGAGTCTCGTGCGCCATTTGTGCCCAGTGCCGGCCCTCGGCAGCGGGCTCGG
CCGCGCCCACGCAGCACCACCCCACCACCAGACCACTACTGCCGCCGCTCACCACGCACA
CCTCAATAGAAGCCTCTTGAAGATTAGCTGAGGGTAGACTGAACGAAAGGGCTTCATTCC
ACACTGGATTATTTATCTCTTTCCTGTTAGTTTTCTTCTTCTTCACTCGTTTGCCATTCA
CCAGTAAATACACTTTGACATATACATCCAAAGCTTCTTTCCCCTCTTGTGGCGGTAGAA
GATTCCTAGCTTTCAACACAACGACGGTAAGCCTCTCGGCGGAGGGTAGATAAGATAATG
ACAGCAGCAATTCTTGTAGCTCCTCAGGGGGACGTCGTTCACGAGACAGTTCCGCCCACA
CCTCAGCCCCACCGGCTACTTCCACCCGCGATAACGGAACCTTAGCCGAACCCATAACTT
CGTTACGGGAGAATCTGTCATAATCGAACACTTGGAGCAGGAGAGTTTTATCGCTGAGCT
CATCATGCGAGACGGGAAACTTGAAATGCTGGTCAAAGAACGGATTCGCCTCGTTCCTGT
GGACTGGGGTTTGTCGTACGCGGGTGTCTACTTCAGGTAGGAGACTGACGCGGACGTAGG
GGTCATTGAACCCGCCTGCTTCGTATCCTGCCAGGTCATGGGCTTCAATAAGATGAACTT
CCAGATCGGATCTATCGAAGTCATATTTCAAGCGTAAGTGTAGTCTTCCAAGCGAAGGTC
CCAGCCCTTCGAGCTCTATCACGAGAGGCGCCTCCCTCTTAGTGTAGAGATCAGGTTGAA
GTGCTCCCAGAGCACTAACAGCTGCTCCGGCTCCTGGACTCAGTGGTCCTGCACCGCTGC
TGCTCTCCACCAGCGAATTGCTCCGGTCTATTCGTCTTGGTGGCATCAACAAAGGCGACA
GACATCTAGGCGGGGCATGTCTCGGGCTTGGTGGCGCTGGCGAGTCTGCCAAAGATGCTA
GTGACCCATGAGCTAGAGGAGCTGCACGGACGTCCAATGAAGCAGCACGCAAAGGCGACG
GTGATCTCGGCACGTTCACACCTCCGGCTTCAAGAGTACGACCGTCAGGAGCGAACGTCC
GAATTGCAGGCGACGAACCACGATGACTAGTGGCTCTTGAAGTGGCACTGTCCAAACTAC
TTTGAGATGATATGGATGGTGTCCTGGTGAGTCTTGCATGTGGTAGAGAAGTTGCAGCCC
GAGTGTCCGAATTCAACGGCTGAACACGGCACTGCTCTTTCGAAATCAACATCTCACTTG
GACTTCCATGGGACTTGTCATCGCCGAAGCTGTCAGTCGAATTATGACTCTGGCCGCTGC
TGGCGCTTGAGGTTCTCTCTCTGGCAGCCCGCGCCCATGACTCTAACCTCTTCTGCGCCG
CCCAAACACCAGGAGGACCCAGTCCACTCATCGTGTACACTTAACACTTCATTTGTAAAG
CAAAACACAATTGTCTCTGGACAGTTTTAATCAAACATTTTACTCTCAGTTCCAGTGTTC
GTCCTGTTAATATGAATGGTTAGTGGAAAAAATAATTAAAGCTGCCTATTTCTTAAGCAG
AAATTAAAAAGTAATTCTGGACCATATAACAGGGACAACGCTACGCGAAAAACACAGTCG
ATGTCACGAGGATGTTAGAAAAAAAACCTAAAAAATACCGTTTTTTTTTTAAAAAGTACT
GCTAATTTTAGTTGTTGATTAAAGACGACACATATTATTTGTTTGAAAGCAACCGAGACG
GCGGGTCGGTGATTTAGGGGTCACAGACGGAGCTTGCCCTGCGTGGGCGCCGCGTCAATA
CTACGCCGCGTGCTCGAGTACTACGCCCTCAGAGGCGGATGTTTGTTTACATTGCATACA
TCGCGATGCCTAATGACATACGTTGCCGACGTGTACCCCCACACGCAGAAAATCTATAAA
TTTTCGCCCTAGTTCCGGTCCACATGTTTTTGATGTTATATTGGCGAATCTAGGCCGACG
TGTTAACGACGGCTTACAAATGTCAATTCAATCGCATTCAAATCGATAGGCTCCAGTTGC
GATACAACGCCCAAACAAAATTAACCGCGGTACATCTGGTTTAATATTTATATGGGCAAG
TGAGCTTACTTCAACGTAGAAAGTTCAAAAAATTGTTCCTACGAGTGCTTTGAGGCATAT
CACGTTATTTATTTAGTGAAATCGACTTTTGCGCTCAAGGACAGTCTTCGAAAGAATTCT
CTTCACACATTACATAATTATTACATATTGTTATTATTATTTGGTTTGGTGTAGCACGCA
TTTGTGCCCACTAAGAAAATTTGCATTTCATTTAACTGCGCGCAGGACTTAATGAAAATA
ATTTTCCCGAAGAAACTAGTCGACGTTTCTCAGAGCATCATAAATCCAATTATTCTATGA
CAGCATTTTAATTACGCGAGGAAGTGCCAGTTAGCGGGTTTATTTATGGAGACCGTTTTA
TAAATTAAAAATGAAGGAGCGAGGCGTTCGGAATACGCGAGGTAAAAAGCTACAGAAATC
GCAGAAATGATGTCACTAAGCCCGTGTGTCGAGTTAACACGTAATTTTCGGAAGCTGCGA
ACGAGAACACGCAAAATATTTTTACGAGGCCGACCCCTGGATATAGGGCTAACTGTTGCT
TCAGAATCTTTCCCACGACAGATGTTATTCCGACGAGTTTAGGGGCTTATTTAAATTTTA
AACCGCCTCGTGATGTCGTGATTATCTTTACAGCTACATTCGCTAAATTCGTACAGCGCG
AATAGCGCAGACGAATTTATTATTAATTGAATTGAATACTTAAAAGGAGATCAAATAATA
AGTGTTCA
(3188 bp)

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