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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp103867_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_gamma-1-syntrophin_[Bombyx_mori]
Ontology
GO:0002230 P positive regulation of defense response to virus by host
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007154 P cell communication
GO:0008022 F protein C-terminus binding
GO:0016013 C syntrophin complex
GO:0032587 C ruffle membrane
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:7.37 TPM:12.86
ORF EntryO_BomoEE89975_complete:A_BomoEE_comp103867_c0_seq1
Sequence
(Nucleotide)
ATATATATATATATATATATACTATTTTGAACGGACTTAAAAAGTTACCAATGAATTGAC
ACTTTTGTTTGTTTACTTAAAAAATAACATATATTTTACTAGTGATAGTGGAGGAGTAAT
ACTCACAAATTATTATAATATCATCTATTCTCAACAAATCGTTTAAAACATTACCTAAAT
GCTTCACGTGACCACACCTGAGATTCTCGGCAAATACGAAGCGAACGGACAATCTTTTAA
GGGAAATATCAAATAGAAAATATTGTATAATTAAAACTAAGTGGTTGTTAAGATTTTAAT
GTTCCTATTTTCTTCCTCCGACCTCTATCCGCGCCATCTGTCGCCAATGCAAGAGAACTA
ACAAGGGCTTCAAAAAAAAAATTGTAACAAAAAAAGCGGCGGTATCGCGAAATCAGCGAC
AAAAATTAATATTTCGCAAAATTAGAATTGATTTAACTAAAAAGTATTTCTTATAAAAAT
GTCTTCTATGACTTTATAAAAGCAGCCTCTTTTAGTCTGGAAAATGACAAAGTACTCTTT
CCGTCTCTTTGAAATCAAGCGCATACCTACCATAGAGTATTAAAATCGAAAAAATATTTT
TATTTATTACATTTTACAAAAAAAAAACAACAATATTGGATTAAGGCGACTTGCAATTCT
AAAGGTGCGATTTGTTAATTAATCTGCTTAAAATAGCATATGAGAGTATAACTGAAATCG
CATCAAGAAGTCTAGGAATCAGTGAAATAACCAATAATTGTTCCATTTTCAACAACATTA
AACATATAAGTTCTTCTCATTTTAAAATCACCGATCGTGTTTAAAAGACGTCAATTAATT
CGTTGTCAACTAGTTTTCGCTATTAAATTGACAATCAGAGAGTTAGCACGTACATTTCGC
TTCACCAATATTTCCTATCGTTAGCGCTTCTCTTCAGATCCTAGTTTTCGTTAACACGTG
TCTCTTGACATCCTAGTTTTCATTACTAACAAAATAATTCCGAAATACTTAATTATTTAA
AATGCCCTAGCGCCATCTATCGTCAGTCGATGGTATCTTGCCGGATAAAAACAACAAACA
TAATTTTGCGTAGTCAGTGAGATTTTCACACTTGTCCACACTAATAATGTATGTTTCATA
AGGGAATGTTTACAGTCGTTTGGGTTTAATATTTAATTAGACTGCTGTATGGACGCGAGG
AAGGCCGGGTCTACGGAGGCCACCTTTGCGGTCAGGAAGGCGTGCATGCAGAACAATAGA
CTCTGCAGTATTTGACATTCTAATTCTTTTGTTTCAATGACCTTCGTTTCGGCGTCTTGG
AAGTGGAGTTTCAATTTCGATTTTCCATCGTCACTCGAACCTCTTAACTGCGAAAACCTA
TACGACCAGACGGGAGACGCTCCGGGTGTGCCCTCGGTGAGCGAGAACCCCGCCGACCAA
TCCAACGTAAGCCCGGCCGCACGTCCTGAATGCACAACCGTGAATGTCTTTTTCCCGAGT
CTTATAACAGAGTTGACGATGTTAGCTGTCCAGGCGGCCTCGACCCTCAGCAGTTCCTGT
CTGGTCTCCGCGCTGAAGTACCTCGGCCCTGGGGTCCCGACCCCGGCGCTGCTGCTCTGC
ACCAAGAAGCAGTGCTGCCTCCAGTCCACCGTCTCGCTCTCTTTTACAGTCCTGAACATG
GTCTGGTAAACTTTCAGGCTTTCTGGGCATTTCGCTAGCTCGGTCATGTTCATCGGTGGT
ACGTCAAAAAGCATGACGTCAGTTCCTTTCAGTACCAAGAACTTCGGTCTATAGGACTGC
CAGGGCTGCGGGGCCGTGACCACGCCCTCGTGCACCCAACCCATGTACTCGATCCGCTCT
CCAGCCGCCAGGTGGCGGTTAAAAAGTTTCATCTGTAAGTTCGTGAGTCCCACGATATTA
TCGGAAATGCTCTTCAGCCAGTGAGAAAGCGCCACGGGATCGTCCACGTGTATCACTCCG
GTGGTTAAATGCGGACGAGCTCCTCGGACCTCAAAAGCTCCAGGTCTCAATTTATCCGTT
CCAAGGACGTATCGCGTTACGTATCCCATCATTAATGGCACTGATACGACGTCGACCCAT
TCCTTAATGGTGACATCGTGTCTATCCGAAGCCACCGAGGGAGGCCGGGAGCCTCTCACC
GACCCTGTAGCACTCCCCGGTCTACTCGATTCTTCATCAGGCCAAGCGCTCTGCCAACCA
CCATTGGTGTGTTCTGAACTCTTCTCCGAGTTGCAATTCGCATCGACCTTGTTGTGAAGC
GATGGGTGATCGTCGCCGGTGCTGCTGTCTGTATCTGATGCTCCGTCAGCTTGCTTCTGT
AAGAAAGGTGTGGCAGCCCTATAATGCTTCACAGTTAGTACAACGATATCACCGGCGTTC
CTCAGTATGTTCACAGCATCGTCGTGTTTGCAGGCTGTTATGTATTCACCATTAACTTTA
ATTACAGCATCTCCAACAAAAAGTTGTCCTGTCTGATCAGCAGCTTGGTCCTTGTATATC
TTTGAGATTAATATTGGCAGTTTATGTTCTGAACCTCCCTTGATGCTGAGGCCAAGACCA
CCAACTTTCTGCCTGGTAATTTGTACCATCCGCTCCCTAGCGTGAGGCACATTTTTGTCT
TTTGGTGGTAATATGGGCACAGGTGCCTCTCTCTGGATGGTCACCGCGTCCATGGTAAGT
AAAAGCCGTGCAGGCCGTGGACGGGACTTCCCATCCGACACCTGCACCATTCCTGTGCGT
ATCTTTTCATCTTTCTTCTCCTCTATCGGCGTCATCATCGCGACAAACACATACTATTAT
AATTACTAGTATGTTTTTATACTTTTTCAATTAAAATCACGATATATAAACTTTCGAATG
CATTATTTTAGAACAACACATTATTCGTTTTCCAAAACGATATGAATCCATGTGAACCAT
CCCCTTGCATCCAAGCTGTTGCTCTTTATAGTATTAGTATTAATTATTTAAGGATTACAC
TTTACAAAGACGAAAAACAGGTCACTGGCTTAAGATAAATCAATATAGTTTAATGGGATC
AAAACAATGAGTAGTACACATGTTTATAACACTTCTCAACAAACCGCAGATATAAGTGTT
AGTGAAATAGGTATTTGGTTTATTGTATTAATTCATTGGCAAATTTGAAATTTAGTTGCC
CAATGTACAACATTATTAATTAATTCACTAAAAAACTGACGAGAGACTACTTCAATTTAG
GGCAGAGCAAGTAGTTTTTTAGAGATG
(3267 bp)

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