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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp102100_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		argonaute_3_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0010529 P negative regulation of transposition
GO:0031047 P gene silencing by RNA
GO:0034584 F piRNA binding
GO:0035194 P post-transcriptional gene silencing by RNA
GO:0043186 C P granule
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
Transcript
Level		FPKM:5.49 TPM:9.58
ORF EntryO_BomoEE89957_3prime_partial:A_BomoEE_comp102100_c0_seq1
Sequence
(Nucleotide)
CACGCACTGTCCCACTAGATACGAGAGTTTGTGCGCATACTGACAGGGCGCCGGAACGCG
CACGGTCCCCGGCCAGTTGTAGTACAAGTGACACATCTTGTACGTCAAACGCTGACACTG
GTCCGGGGTGATCCCGCTGTCGTCGTAGACCACCACGTAATGGGTCGGGGTGACAGTGCC
CTGGGTCACTTTCTGCGAGACGATCAGGAAATCGTACCAGTCCCGTCTCGTTATACAGTG
ATCGACCACGGTCCCGGGGTTCGGATTGTCGTAGCCGTCTCTCGACTTCAGGAAGATCCT
AGTGTTGATACGTTTTTGTACGACAACATAGGTCAGGGTAGGCTGGTAATTCGATCCCAA
TATCGTGAAGCAAATCTTCATTTGAGGTATCTCGTATTGCTGCAATAACTTCAGCTGCCC
GTCGCCTACACCGTCTCTGTATATGATGATCCTGTCCGGAAGCTGTCCGTTTGATCTCAA
ATAATGAGTTAACGCATCAACGAGACAACATTTCAAGCCATCAACTATTTCTTGACCCTT
CTCTTGGAAGATCACTTTCGAATACCAAAGCGTCATGCTTTGATTATAGGATGCTACAAA
ACTGCAAACGCTCCGGTTCCTCCTGGATGGGTCGTGATACGAATCGATGCCAACAATCAT
TGCGCTCTTAAACGGTATGCTGATGCTCCAAAGCGTGCCGCCCAGTTTGCAATTCAACTG
AAGCAAAATCTTCTGAGTGATCGATCTGATCTTGTTCGTGTTCATTAACGTACGTGCATT
TATAACCTGTGAAGGCACGGGGTTGTCAGCACAACAAACTTTCTTAATGGCCGCGTATCT
GTCGTCTCTCTTCGTAGAACATATTGCAACGACTAATTGTACAGACGACGTTATGCACTT
CTTCAATGCCAGTACGTACGTATCTGTTCTATCATTGGCGAGGGGTACCAATTCAGCGTC
AGAAACCATAATACCCATTGGTCGACAATTTCGTTTGAGTGTACTAAGAAAGTCCATAGC
AACCTGCTTATCCCTCTGAGTGAACAACAGAACCCATCTCATGATATCCACAGCTTGCAT
CACACTGTGTTTAGTCACCTCAGAGTTCCACTCTGCATTCGGTTTACCGGGAACTCTAAC
ATTGTCTCCAAAATACAGTGTCTCTGGTGGCAGGGTACGAGCTGTTAGGTTCACAGTTTC
CGGTGCTATACTGAGACCCCAACCCGCTAGACGACTCTTGGCAGTTTCGTTTTTCATTAC
ACTTTCTATGTACTTCTTAAAAGCGGCATGGCGCTGATTTGGAGTGATCCTCGTGTAAGT
AGCTACATCTTTCATTAATCTAAAGTTACTGCGTTGATCATCTGTTAAACCAGTCAATTG
ACATAACTCCGGAATGAGGCATATCATGAAATCTGTTGGAGTGTCTGATCCGGGCATACG
TTTTGTGTCTCTTGAAATGAGTAAGGGTTGATCCCAGTCCATTATCTCGATACCATAATT
CTTCTTATAATAATCTATAAAACTAATCTGTACAGTTTCGCCTTTCTCTGTTTTCTCAAA
TGTTGATCTCGGACTCATTTTATCGTCAATTGTATCAACTCTAAACAATTTCTTGTTATA
AGTAGTCATAACAGAGGCTCCTATTAGTATATCTGTCATCTTACGTTTCCAATTAGCTCC
TTCAGTTTGCACAACCTCTTTGATCAGAGAGAGAACGGTTTGCGTTCGTAATACACGATG
AGTCGAATCTAATGTTAACATCAGACCGCCTTCGTATTCGTCTACTGCTGTTACGTATCC
AGGCCAAACTTCTAATTTATGCTGAGGTATCTGTATGGCTGCGTGCTCATTGTAATGTTG
GCGTCCGAAGCGAATCAATTTCAAATCCTTCATTATACATTTGAACATCACATTGTATAT
GTGAATCATTTCGCTCAAACGACGTGTGCGACGAAATATAATAGAAACGTTTACTTTGCT
TTGGTCATATGGGTTAGTAGATACTAAATTACGGACTGCATCGGGCAGTTCGTGTGGCAC
GTAGAGGGTGGTACCATCGAATGTTTTCTCCTTAAAGTGTTCAATGTGCTCGTTGAGCAA
TTTGAATCGCAAATGTTTATAGTCTTGATCTGGTTCAAACTTCACTTCATACTCAAAAAC
AATGTTCTCTTTGAAATTGAGATAAATGTAGTTACAAGTCACTTCTATAGGCACACCTGT
TTCACCTTTCTTTACGACTGGAGGAGTGTCTTTCACCTCCCTGAAATATTTGTTCTTGGC
AACTGAAGATGTCTGTGCTGAAACTGAAGTTTCAGACATTTTTTCAGTCAAATCTTTAAT
ATCGCTTTGTGCACTGCTCGTTACTTGACTGCTTGCTACTTGACTGCTTGCTTTTTGACT
GGCTTGCAAGCTCTGAAGCAATTTGAATCCACGTCCAGTTCCAGCTGTTGGTGCAGAAGT
TGATGAAGGTGGCACAAAAATTGCTGGAGTTGTGGAGCCTGGTTTCTGCTGCATTTTAGC
CAGCATCAATGCTGCTGCGCGTCCTCTACCGCCTATACTCACTCCTGAAGTACTAGGAGT
TGCACTTGCAATGGTACTTGGAGCTGTACTCTGTTCTGGTGTACTTTCAGGAGACTGACT
CTCAGATTGTGAGGGAGAGTCCATCATTTGTGACTTCTTCAGTGCCTGTAAAAGGGCTAA
GCTTCGCCCCCGGCCTTTGCCTGGGTCTGCCATCACTAACAATCTCCAATAGCAGGATCA
CCTAAAAATACGGCTAGCAGTCGTATCTGAATGTGGTAAAATTATTTAAATATCGATGAA
GAAATGTTTGAAACTTCTTGGTTGCTAATAATATTTCATCTTGCGTGAAG
(2870 bp)

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