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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoBR_DN30780_c3_g8_i4
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		titin_isoform_X2_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005112 F Notch binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016604 C nuclear body
GO:0016922 F nuclear receptor binding
GO:0017053 C transcription repressor complex
GO:0042826 F histone deacetylase binding
GO:0044255 P cellular lipid metabolic process
GO:0047485 F protein N-terminus binding
GO:0072365 P obsolete regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter
GO:1903799 P negative regulation of production of miRNAs involved in gene silencing by miRNA
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoBR100641_complete:A_BomoBR_DN30780_c3_g8_i4
Sequence
(Nucleotide)
GCGGCAGGGCGGCGCAGGGGGCGGGCGCGGGGGGCGCGGCGCCCTCGGACTCGGAGGAGC
CGCTCTCCTCGCTGGTGGACCGCGCGGCCGCGCTCGCGCTGTTGCGGGCGCTCACCACTG
CGTCTAGTTGCAGCTTTTTTCTGTAGGTGAAGTAGTAAGCCTTGAGGGCGGCGGGCGTCC
GTCCGCTGACGGCCGCGATCTGTTCCCAGGCGGTGCCGTGCTCGCGGAGCCACCCCCTGA
ACTCGTCCTCGGCCGGCTCGCAGCCCGGGCCCGCGCCCTCCAGCCGCCGAGTTATACGTT
TCAGGCAAGACAAACAGCACTTGCTCAACTCGCTCGGGATCTGGAATTCCTCCATGAGTG
GTCGTTTGAGTTCGATGGCGAGGTCGTGCCACCGCGGTGGCAAGTGGCGCAGCCGTTTCG
CTCTGACGCGCGGTCCGGGACACGTGGGCACCGGACACCGCGTGTACCGCGACCTCACGC
AGCGACAGTGACACGCCTCACACACGCGAGATCCTACCGACTCCTCCTTAAGTCCGTAGT
GAGCAGCCCTTGACCTCGAGACGGTTCTGGTGGCTCCTGGCGCGCTGCAGACGGCGCAGT
TCGACGAGGACGCGGTCACCGTCGTGGTGCTCGTGGTGGTGGAAGTCGTCGATGTGGAAG
GCGTCCCTATCCTCTCTATAACCGCTGTCTCCGGGGTTGGAGGGGGTTGTGTTGGCGTGG
GAGGGTTCGCCGGCTGCGGGGTGGGGGGTGCACTGGTCGGGCCCGCCGCCGCCACCGCGG
TCACCGCCGGCGCCGGGACCAGCACGGACGTCGGCGTCGAGGAAGGCGTGCACGTGACCA
CGGCCGACACGACCACGGTGGGGGGCGTCGTCGTGGCCACGGTGGTCGTGCTCGGCGCGG
TCGTCGTCATGGAGGAAGACGACGTCGACACTGGCGCGATTGTGGACGGGCTCGTAGACA
CGGGTGTCGAAGCTGGCGACGGCATAGACACCGGCGAAGGCGCGCTGGGCGGAGACGACT
CCTGTACAGAACTCAAAGCTGTGATCGTGATGGTGGTTTCGGTCGTGGCCGCCGTCGTCA
ATAACGGTATTTCGATGAGCGTTGCAGTGGGGGGAGGCGAAGTAGGCGGTATGGGGATGG
AGGAGGGGCTGTCCATCGATGCTATCGTCAGCGGCATCGAGGATGAAGTGGTCACCGCCA
GGGGGGCCGACGAAGCCGGCGGAGGGGAGGGCGGCAGAGGCGGCGTTCTCGCTAATTCGA
CCCTGATTGCCGCATAACTGAGTGGCTGTGAGGGCGCAGCACCGGCCGGAAGCGGCACGG
CGGAGGGCTCCGGGATCAATACCGCACCCGCGCCTTCCTCCATCGCCGGTTCCTTCACGT
CTGCACAACGAGCTCCCTGGGAGCGCTGCAACCGCGTGGTGACGCCGGCGGGCAGGTCGG
GCTCCGGGGCGGCGCGCTGCGGGTTCCGCGTCGAGCGACGCTGCCGGGGCTTGCGCAGCA
GCTGCTTGTAGTTCTCAGACTTCTTCGATAAATAGTAGAATCTTACGCAGTCTCTGACAT
TCTTCCTGGGTAAGAACGAGGCTATCGTTCCGAAGTTCTTGGGGTGCTGAAGGTACTTCT
CCCTGAAGAGCTCCCTCTCGTTCTGCGACCAGATGTTGCGGAGCTGTAGCTCCTTGTGCT
CCGACTTCATGTCGAGACACCTTCCCGGGATCAAGGTGTTGGTGTCCAGGTAGATCGGCG
TGGTGTCGAGCGGGTCCCGGCGGAGCGGCGGCACCACGGTGAGCGCCCTCATCTTCTTGT
CCTCATGCTCCTGCTCGTGCAAGCCATCCGCCAACTCCTCCAGCTCCGCCTCGGACTTCA
CCCTGGCTCCGAGCCGGTGGAACCTCTCGCGTTCCTCGCGCTGCTTCCTCAGCTCGGGAA
ACACCTTCTCGAAGAATTCCCTGTTCTTCGCGTCTTTCGCTTTCCTCTTTTGACTCTGCT
CGATTCTTTCGACCCTTCGCGCCCACTCAGCCGCTCGCTTCGTGTACTCATCTGCTAATA
CATCTTCTCTCTTTTCTGACTCAGCCTTTATTCTCCGTATATGTACGATCAATCTTTTCC
TAAATAATCTGTGCTTCCTAATGTTCTCGTGGTAGACCTCCGTGTCCTGGGGCTGGTTGT
ACAGCGGGTACGGCACGGGGGGGCCCAGGTGGTCCAGCTGGGCGTGGGCGGCAGCCGCCT
TTTTCCTGTTCTCTGCGTATATACACTGCGCGAGGCTCCGATGCCGCGAGGGGGCTTCCT
CGGGCTCCTCGGCCCTCGCTGGTTTGGAGGCGGACTGCTGCAGTTCCTCCTGTTTACGCT
TCAGCTTCGCAAGGGATGTCTCCACCAGCGCCATCTCTCGATCCACCTTAGATATTTGCT
TAAGGAGAACATCTTTAGTGGTCCGGAGCGTCTGGTCCTCGCCGGAGGTCTCCGAGGGCG
GGTTCGGCGAAAGCACCTCGACCGTGTTGTAAGTGTTCACCGGTTCCTGCGAAAACGCCG
GGGATCCAACTATTACAAAGAGTAACATGCAGCCGTAATCTATCGTTAGATATTTTGAAG
GGATCGGGTCAGAACTCACAAGATAATTCTCAACCGTCAAAGTTTTTTTTTTCTTTTTTA
CAAGTAAACAAATAATATTATCAAATCAAATCAAAAAAAAATTATTCAACATAAATGAAA
GTACATTGTTGTACGTCAAAAAGAACTACCGCC
(2733 bp)

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