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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoBR_DN30739_c3_g1_i20
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		intron-binding_protein_aquarius_isoform_X1_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoBR100952_complete:A_BomoBR_DN30739_c3_g1_i20
Sequence
(Nucleotide)
CTCAGCGTGTTTGAAAAGATATACGATGTGAGTCAATTAATGGATTGCAAAATAAAAATA
CATGTTTAAGGTAATTGAATGATTTATTTAATGGAATCAATGAGGTTATGAGTTCGCGGC
GTTCGGTTCATCGACTTCGTTGAGTATGTCGGTGGGGGTGAAGGCGTCCGACTCGTCGTC
GCTGTCGGGCGCGGCGCCGGGGTGCGCGGGAACGTGCCCCCCCGCGCCCCGCGCACGCGC
CGCCTCCCGCCCGCCTGGCGCCCGCCAGCCACTTTCCTGTCGAGCGTCGGGTGCGTCGTT
GACAATGTGCAGGTACATGTCGTAGACGTAGCGCGCCATGTGCGGCATGTCCCGGACGGA
CAGCAGCAGCTCCGGCGGCACGGCCACGCCCGCCGCGCGCTGCGCCGGGTACCGCTCGCC
CGGGACTAGTTCAAGCTGCAGTGGACGCTCCACGAGCTGATTGAATGTAGGCTGTAGCTC
GTAGCAGTTCCTGAAGAGGTTGGCCCTCGCGAATATGTATAGGCCGAGACGGGCTCTTGA
GGCGGCGACGATGAGTCTCCGCAGGTCGCGCACGTGACCCACCGCCTTCGTACGGACCAG
CGACACTAGAGCTATGTCGTTCTGCTGGCCCTGGTACTTGTCTACCGTCGTCACCTTGTG
AGGTCGACCGATGAGTGGATTATCGGCACATCGCTTATCTATGACGTCCCTGATGAGATG
TTTCTGCCCGTTATATGTGGTCAGTATGGAGATGCGCTCTGCAGGCCATCCGATCAGGCG
CATGTACATGAAAACCGCTACAACGTATTCTGCTTCCGCTAAATTCTGATAGAAGTAAGG
GCTGGGCTCGGTCTCGCCGACGCCGTTGAAGTCGTCCACGTTGACGAGCTGGAAGTCGTG
TCGCAGGCCCGCGTTGGCGGCGCGGTACTCCGGGAGCTGCGTCACGTGGCACAGGTCGCC
CAGCGCCCGGTAGCGCCAGCGGTACAGGTTGCAGATGCTGGGTCTAGCTCGACCTTGTGC
GTCCAGTTCCACGTACGGAACACCCAGTCTGACCATTCTGGTGAACAGGCTCTGTTCCAT
GTTGCAGTACTTCTGGAACGCCATGTTCTTGACGACCGGGGGCAGCTGGTGGTGGTCGCC
GATCATGATCCAACGCTTCAGCCGGGACCTGCCGTCCTGCGGGTTCTGCAGGAGCAGCGG
TATGAACGTCTCGATCTCGAGGATTTGAGCTGATTCCTCCATCAGTATGTTGTCGTATTT
GAAACCCATTTGCACTAATTCGGAACGTTTGAGGGCGGCGTGCGTGCACGTCATCGCGAT
TATTTTCGCTTCTTTGACCAACAGGTACTTGGACCGATCCAGTCCGGACCTCAGTAGTTC
GAAGGCTCGGAACTCTTCCAATTCCTCGAATATGTGATCAATATACCTGTAACAGCTTTT
GGCTATTTCCATGTCCTCTTCGTGAGACTTCCTCAGGAACAAGGGTTTCGGGGCATCATC
GAAGAATTCGTGGAACGGAAACTCCTTGCTGACTATCTCAATCGAGTTTGTCTGTTGCTG
GCAGTTCTCGAGGAAGGCTCGCCAGCGCGGCCGCACGTGGTAGACGTGGAAGTGGTGCGC
CAGCTCGCACGTAGCGCCGGCGTCCGAGCCCGCGTCCAACGTTCGCTGCAGCCGCGACAC
CAGCTCGAGCAGCTCCAGACGCTTTGCCAACACATAGTTCACGCGGCCGTATCTGGAGAA
GTCTTTGTCTGTCTGAAGAGCTTCCTCGCCGTGACCGAGACGCAGTAGATGCCTTTCGTC
TACATCCAGCTCGGCGACCTTCTCGAATAGCTGATTCAGGGCCTGGTTGCTGTGCGTTAC
GACCAGGGTACGTTGCCACGGGAAGTTGTGGTATATGTTCGAAATTATTTGAACTGCCAC
GTCCGTTTTACCAGTTCCAGGTGGACCGACGACCAATGTGAGTCCAGGTTGCATTCCAGA
ACGTATAGCTTCCACTTGTGTCGGAGTGAATAGTATATTATTCTTCTTTGGTTCGTTGTA
CAAATACGGTCCCCTCTTCGGTTGTACGTGGGGTTCGACAATGATCGCTTTGCGGGGTTC
GTCTTCGTCCATAGCTGCGTCCCCGACCTGCTGCTTCCGTACGACGTTTTCGAAAGTCAA
CTTGAACGGCCTGACGAGCTTCCTTGGGTCGTTGGTCTGCACCTTGATTTCGTACCCCGG
GAAGCTGTTCCGCAGATGATCCATGTTCAGGAATGTATCGTTGAAGTCCAGAGTAGCTAT
CTCGTTCGGCATCCTCGTGTAATGAGCTTGACCGGGATCTCCGTAGCCCAAGACTATATC
GTGAAGCCAGTCCGGTACAACGCATTCGGTGTTCATTAATTCTCGTATCGTTTCCAATAC
GGCCTTGAAGTTGTTCTCTTTCGGTTTACGACGCATAACTATATTGAAAGTCTCGTACAC
GTCCTCATTCCCTTTACTAGCTCTGTCCAAGTCAAGTCTGTATTGGTTAGGATCGAGTAA
GAGCCTGAAGGTCCTGGAATCTCCCTCTAACTCCGGCCGCGGTTCCGGCCCGTCCTCAAT
GACTCTGCCGGATGCGTCCAGCATACCTTCAACTTCGCAACCCCTCACGTACACTATCCC
CGCCTGATCCACCATACTCTTTCTGTAGTCATACTTTGTACCTATGCCTTGTGTAGGTCT
GACGGTTACCAGGAAGCAAACGTCATGCTTCCTGAGGTTTTCCCATTCGTGTTTTATCTC
GTTTCTGAGGCTCAACGTGACGGTGACATCGGCTCGGACCCTCGACGGGGCCTTCTCGCC
GATGTTCGGTTTGGCCACTTCGACAACTGCGAAGCTCTTTATAGGATGCGCCATCCGCGC
CCAGCCCCCAAAATAAACGCTTCCGTCTTCTGAATTCCACGGCGCCAATCTGTATACGGC
GTCTTCAATGTCTTGTCTTATCTCGTATGTGCTCTCCAAGCGGAACAAATTGAAGTTTCG
TAACAGATAGTCGTGTAATGTTAAAAATTGTAGATTCAGCTTAGGCAGGGCTAGGCAATT
CTCTCCGCTGTATATCTCTGTGGGCACTACATTCTCGTCCCAGATAATCTCTTCTGTAGG
ATACAGGGGCATTAAGTTCAATTCTTCCAATTGTGAAATTCGCCTCTCGTGACGCGAGAT
CAATAGCTCTCTGAGGAAATCTTTGTCGAGTCGGTGCCAAGGCGTCTCGTCTTCTTTTCC
TTCAGGAGGAACCAGGTTCAGGTACGTGGCGATTGCTCTTAAAGCTTTGTCACTATGAGT
TTAGAGAATAAAAATAATGTTTTTTAGTTAGTTTAGTTATTACCAAAGTTCTTCATCAGT
CCGGAATTCATCTCTTCAAATGATTGCGTCGAGACATTATTAGGCAATGTGTCCCACAAT
TTTTGAAGTCAAACTTCTTTAGACGCCTTGAGAGTAAAATTTAACTCGCGACAGATTTGT
TACGGCTAGACAGAAAATATACAATTTAGGAAGAGCGAGAGAAAAATATACAGCGTCTCG
CGAACCATTCGACTGTGGAGAGAGAGAGAGAAAATACAAAGCGAGCTAGTTTTTCTTATA
CATAGCACTCCATATTACAAGAGAAATTTGATTTAAGGATGAAAAATAAAGAAAATCACA
ATACTACAGACCGCAACAGAAGTTTCACTTTTTTCA
(3696 bp)

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