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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoBR_DN30709_c4_g3_i7
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_nucleoprotein_TPR_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000189 P obsolete MAPK import into nucleus
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003674 F molecular_function
GO:0003682 F chromatin binding
GO:0003729 F mRNA binding
GO:0005215 F transporter activity
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0006404 P RNA import into nucleus
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006999 P nuclear pore organization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007077 P mitotic nuclear membrane disassembly
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0008150 P biological_process
GO:0010793 P regulation of mRNA export from nucleus
GO:0010827 P regulation of glucose transmembrane transport
GO:0010965 P regulation of mitotic sister chromatid separation
GO:0015031 P protein transport
GO:0015631 F tubulin binding
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0019083 P viral transcription
GO:0019898 C extrinsic component of membrane
GO:0031047 P gene silencing by RNA
GO:0031072 F heat shock protein binding
GO:0031453 P positive regulation of heterochromatin assembly
GO:0031647 P regulation of protein stability
GO:0031965 C nuclear membrane
GO:0031990 P mRNA export from nucleus in response to heat stress
GO:0034399 C nuclear periphery
GO:0034605 P cellular response to heat
GO:0035457 P cellular response to interferon-alpha
GO:0042306 P regulation of protein import into nucleus
GO:0042307 P positive regulation of protein import into nucleus
GO:0042405 C nuclear inclusion body
GO:0042803 F protein homodimerization activity
GO:0043495 F protein-membrane adaptor activity
GO:0043578 P nuclear matrix organization
GO:0044615 C nuclear pore nuclear basket
GO:0044822 F RNA binding
GO:0045947 P negative regulation of translational initiation
GO:0046825 P regulation of protein export from nucleus
GO:0046827 P positive regulation of protein export from nucleus
GO:0046832 P negative regulation of RNA export from nucleus
GO:0051019 F mitogen-activated protein kinase binding
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0051301 P cell division
GO:0070840 F dynein complex binding
GO:0070849 P response to epidermal growth factor
GO:0072686 C mitotic spindle
GO:0075733 P intracellular transport of virus
GO:0090267 P positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:0090316 P positive regulation of intracellular protein transport
GO:1900034 P regulation of cellular response to heat
GO:1901673 P regulation of mitotic spindle assembly
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoBR100709_complete:A_BomoBR_DN30709_c4_g3_i7
Sequence
(Nucleotide)
GAATTGCAATTACCGGCATAAATAGGTAGGCGGGCGATTACTGATCCGTTACAATCACAT
AACATATTGTGTTTATTCCTGAATTCTTGAAGAAGTTATTATATAGTATATAATGTGTAC
ATAAATAGATATAACTTACAATATGTTTATGCAGTGAAATTGCTACACTTAGAACGGACT
TAGAACTGACACAATTAATAATAATAATAAATAATTGAAATATGAAACATTTTGGGCCAT
GCAGCTCTAAATTCAACCAGACACGTCTTTAGTACTGTAAAGGAATATTGTCACTTGTTT
TTTTAAAATGCCAATTGTGAAACTTGCACTGGAGGCTGCTTGCTTGCTTCTGTGGGCTGA
TCAAATATGTCATGTAGTCGAATTACCTGATGCGGCGATGAAGGTTCGCTTCCCTGTGAG
CTCACCGCAGCGGCCTCTTCCTCTCCACGGGACTCTTCCCATTCCCTAGTCTCGCTGCTT
TCACCCCGATGATGAGGGTCGGTGGTGGCGGGCGGCATGGCGGGCGCGAGGTCGGCGTGC
GTGTCGTGGTGCTGCAGCGGGGCCGCGTCGGCGCCCGTCGCCTCGGAGAACGTGAAGCGA
GCGTCCGCGCCGCCCACCGGCGACACCACCGCCTCTCCGAAACCATCATTTCTACGTGGC
ACGTACAACGTAGGTGTTGAAGGAACTATACTGTCATCGCCGTCATCTGCACCGTTGCCT
CCTAAAGACAAGGCGCCACTTGGTTCGGTTCCAGAGCTGATGGCCTCGATCTGTTGCTGC
GGGGGCGCGGGCGGCGCGGGGGTGGGCTCGGCGCCCGCCTCTGGGGACTGTTGTGCTGTA
TTCTCAGAGTCATCGCCCTCGACTTCCTCTTCGTCGTCTGCGCCTTCCACTTCCTGTTCC
TCTTCCACATCTTCTTCATCCTCTTCACCTTCCTGTACAAAATAATATATGATTATATAA
TGCTCTCATCTAAATAGGTCAGTGTAAAGCTCTTTGTGTATTATGACAGAGTACTATGAT
CGCCAACCGGCATCGACTGATGGTAGACCATATTGTAAGCCCGGACGGGTAACCTGCCTA
TTATTCCTTCGAAGCAGTAATGTTTCAGCAGTTCTGTTTTGATAGGTTTGATTTCAGTTA
TGGTAATACAATTGAGATTTCAACCTCATGTCTCAAGATGGATGGTGGCATTCATGTTGT
GATGTCTATGGAGATGTCTATATTTTAATTGCAAGAAAGTA
(1241 bp)

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